Nucleotide Global Alignment

Description

Query:
TRCN0000492123
Subject:
XM_006505002.3
Aligned Length:
4035
Identities:
1077
Gaps:
2818

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAGGCTCCCACCGTGCTGGCACCTGGCATTCTGGTGCTGCTGTTGTCCTTGGTGCAGAGGAGCCATGGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGCAAGGAGGCCCTAGTGAAGTCTGAGATGAACGTGAACATGAAGTATCAGCTCCCCAACTTCACGGCAGAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCCCATCCAGAATGTCGTCCTACACGGCCATCATATTTATCTCGGAGCCACAAACTACATTTATGTTTTAAAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GACAAAGACCTTCAGAAGGTATCCGAATTCAAGACCGGGCCCGTGTTGGAACACCCAGATTGTTTACCTTGTCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGACTGCAGCAGCAAAGCCAATTCATCAGGAGGGGTTTGGAAAGACAACATCAACATGGCTCTGCTTGTTGACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CATACTATGATGATCAACTCATTAGCTGTGGCAGTGTCAACAGAGGGACTTGCCAGCGGCATGTCCTTCCTCCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GACAATTCTGCTGACATCCAGTCTGAGGTCCACTGCATGTTCTCCCCAGAAGAGGAGTCAGGGCAGTGTCCTGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTGTGTAGTGAGTGCCCTCGGAGCCAAAGTCCTCCTGTCGGAAAAGGACCGGTTCATCAATTTCTTTGTGGGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATACGATCAATTCCTCCTATCCTCCTGGTTATTCACTGCATTCGATATCGGTGAGACGGCTGAAGGAAACCCAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GATGGTTTTAAGTTTTTGACAGACCAGTCCTATATTGATGTCTTACCAGAATTCCAAGATTCCTACCCCATAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTACATACATGCCTTCGAAAGCAACCATTTTATTTACTTTCTGACTGTCCAAAAGGAAACTCTAGATGCTCAGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTTTTCATACAAGAATAATCAGGTTCTGTTCCGTAGACTCTGGGTTGCACTCCTACATGGAAATGCCCCTGGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGCATCCTGACAGAAAAAAGAAGGAAGAGATCCACAAGGGAAGAAGTGTTTAATATCCTCCAAGCCGCGTATGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAGTAAACCAGGGGCCAATCTTGCTAAGCAAATAGGAGCTAGCCCTTCTGATGACATTCTCTTCGGGGTGTTTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CACAAAGCAAGCCAGATTCTGCTGAACCTGTGAATCGATCAGCAGTCTGTGCATTCCCCATCAAATATGTCAAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GACTTCTTCAACAAGATTGTCAACAAAAACAACGTGAGATGTCTCCAGCATTTTTACGGACCCAACCATGAGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTGTTTCAATAGGACCCTGCTGAGAAACTCTTCCGGCTGTGAAGCGCGCAGTGACGAGTATCGGACAGAGTTTA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCACGGCTTTGCAGCGCGTCGACTTATTCATGGGCCGGCTTAACCAAGTGCTCCTGACATCCATCTCCACCTTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATCAAAGGTGACCTCACCATTGCTAATCTAGGGACGTCAGAAGGTCGCTTCATGCAGGTGGTGCTCTCTCGAAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGCACACCTCACTCCTCATGTGAACTTCCTCCTGGACTCCCATCCTGTATCTCCAGAAGTTATTGTTGAGCATC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CATCAAATCAAAATGGCTATACATTGGTTGTCACAGGAAAGAAGATCACCAAGATTCCATTGAATGGCCTGGGC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGTGGACATTTCCAATCCTGCAGTCAGTGCCTCTCTGCCCCTTACTTTATACAGTGTGGCTGGTGCCACAATCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATGTGTGCGTTTTGATGAATGCCCCAGCGGTACATGGACTCAAGAGATCTGTCTGCCGGCGGTTTATAAGGTGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCCCCACCAGCGCGCCCCTTGAAGGAGGAACAGTGTTGACCATATGTGGCTGGGACTTTGGATTCAGGAAGAAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AATAAATTTGATTTAAGGAAAACCAAAGTTCTGCTTGGCAACGAGAGCTGTACCTTGACCTTAAGCGAGAGCAC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GACAAATACGTTGAAATGCACAGTTGGTCCCGCGATGAGTGAGCACTTCAATGTGTCTGTAATTATCTCAAACA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTCGAGAGACGACGCAATACAGTGCATTCTCCTATGTAGATCCTGTAATAACAAGCATTTCTCCGAGGTACGGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTCAGGCTGGAGGCACCTTACTCACTCTTACTGGGAAATACCTCAACAGTGGCAATTCTAGACACATTTCAAT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TGGAGGGAAAACATGTACTTTAAAAAGTGTATCAGATAGTATTCTTGAATGCTACACCCCAGCCCAAACTACCT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTGATGAGTTTCCTGTGAAATTGAAGATTGACTTGGCTAACCGAGAGACCAGCAGCTTCAGTTACCGGGAAGAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCCGTTGTCTATGAAATCCACCCGACCAAATCTTTTATTAGTGGTGGAAGCACAATAACGGGTATTGGGAAGAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCTGAACTCGGTTAGCCTCCCAAAGCTGGTAATAGATGTGCATGAAGTGGGTGTGAACTACACAGTGGCATGTC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AGCATCGCTCAAATTCAGAGATCATCTGCTGCACTACTCCTTCACTGAAACAGCTGGGCCTGCAACTCCCCCTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AAGACCAAAGCCTTCTTCCTGTTAGACGGGATTCTTTCCAAACACTTTGATCTCACTTATGTGCATAATCCTGT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GTTTGAGCCTTTTGAAAAGCCAGTAATGATCTCAATAGGCAATGAAAATGTAGTGGAAATTAAGGGAAACAATA  2590

Query    1  -------------------------------------------------ATGCAAGAGTACACACT---CCTCA  22
                                                             .|||.|||||...||||   .||| 
Sbjct 2591  TTGACCCTGAAGCAGTTAAAGGTGAAGTGTTAAAAGTTGGAAATCAGAGCTGCGAGAGTCTCCACTGGCACTC-  2663

Query   23  TTTGGATAGGCT------TGTA-AGTGCCC---GA--------------------------------AGTGTAA  54
              ||||   |||      |||| |||.|||   ||                                ||||.||
Sbjct 2664  --TGGA---GCTGTGTTGTGTACAGTCCCCAGTGACCTGCTCAAACTGAACAGCGAGCTAAATATAGAGTGGAA  2732

Query   55  GC-----------CCAACT-----------------------------ACAGAAAT------------------  70
            ||           .|||||                             .|||||.|                  
Sbjct 2733  GCAAGCAGTCTCTTCAACTGTTCTTGGAAAAGTGATCGTTCAACCGGATCAGAATTTTGCAGGATTGATCATTG  2806

Query   71  ----GGTTTCAAATGAATCTGTAG----------ACTA-CCGAGCTACTTTTCCAG------------------  111
                |||.||||   .|||.||||          |.|| |||.|   ||.||||.|                  
Sbjct 2807  GTGCGGTCTCAA---TATCAGTAGTAGTTTTGTTATTATCCGGG---CTCTTCCTGTGGATGAGAAAGAGAAAG  2874

Query  112  ----AAGATCAGTTTCCTAATTCATCTCAGAACGGTTCATGCCGACAAGTGCAGTATCCTCTGACAGACATGTC  181
                ||||.||||||||.||.||.||||||||.||..|||||.||||||||||.||.||||||||||||.||||
Sbjct 2875  CATAAAGACCAGTTTCCCAACTCCTCTCAGAATGGAGCATGCAGACAAGTGCAATACCCTCTGACAGACCTGTC  2948

Query  182  CCCCATCCTAACTAGTGGGGACTCTGATATATCCAGTCCATTACTGCAAAATACTGTCCACATTGACCTCAGTG  255
            |||.|||||.||.|||||.|||||||||||||||||.||||||||.|||||||||||.||||||||||||||||
Sbjct 2949  CCCTATCCTGACAAGTGGAGACTCTGATATATCCAGCCCATTACTACAAAATACTGTTCACATTGACCTCAGTG  3022

Query  256  CTCTAAATCCAGAGCTGGTCCAGGCAGTGCAGCATGTAGTGATTGGGCCCAGTAGCCTGATTGTGCATTTCAAT  329
            ||||||||||||||||||||||.|||||.|||||.|||||||||||.|||||.|||||||||||||||||||||
Sbjct 3023  CTCTAAATCCAGAGCTGGTCCAAGCAGTTCAGCACGTAGTGATTGGACCCAGCAGCCTGATTGTGCATTTCAAT  3096

Query  330  GAAGTCATAGGAAGAGGGCATTTTGGTTGTGTATATCATGGGACTTTGTTGGACAATGATGGCAAGAAAATTCA  403
            ||||||||||||||||||||||||||.|||||.|||||||||||||||.||||||||||.||.|||||||||||
Sbjct 3097  GAAGTCATAGGAAGAGGGCATTTTGGCTGTGTCTATCATGGGACTTTGCTGGACAATGACGGAAAGAAAATTCA  3170

Query  404  CTGTGCTGTGAAATCCTTGAACAGAATCACTGACATAGGAGAAGTTTCCCAATTTCTGACCGAGGGAATCATCA  477
            ||||||||||||||||||.||.||||||||.||.||||.|||.||.|||||.||||||||.|||||||||||||
Sbjct 3171  CTGTGCTGTGAAATCCTTAAATAGAATCACAGATATAGAAGAGGTCTCCCAGTTTCTGACTGAGGGAATCATCA  3244

Query  478  TGAAAGATTTTAGTCATCCCAATGTCCTCTCGCTCCTGGGAATCTGCCTGCGAAGTGAAGGGTCTCCGCTGGTG  551
            |||||||.||.||.|||||||||||.|||||.|||.||||||||||||||.|.||||||||||||||.||||||
Sbjct 3245  TGAAAGACTTCAGCCATCCCAATGTTCTCTCACTCTTGGGAATCTGCCTGAGGAGTGAAGGGTCTCCTCTGGTG  3318

Query  552  GTCCTACCATACATGAAACATGGAGATCTTCGAAATTTCATTCGAAATGAGACTCATAATCCAACTGTAAAAGA  625
            |||||.||.||.|||||.|||||||||||.|||||||||||||||||.||||||||||||||||||||.|||||
Sbjct 3319  GTCCTGCCCTATATGAAGCATGGAGATCTGCGAAATTTCATTCGAAACGAGACTCATAATCCAACTGTGAAAGA  3392

Query  626  TCTTATTGGCTTTGGTCTTCAAGTAGCCAAAGGCATGAAATATCTTGCAAGCAAAAAGTTTGTCCACAGAGACT  699
            ||||||.||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 3393  TCTTATAGGATTTGGCCTTCAAGTAGCCAAAGGCATGAAATATCTTGCCAGCAAAAAGTTTGTCCACAGAGACT  3466

Query  700  TGGCTGCAAGAAACTGTATGCTGGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGGTCTTGCCAGAGACATG  773
            |.||||||||||||||.|||.||||||||||||||||.|||||||||||||||||.||||||||||||||||||
Sbjct 3467  TAGCTGCAAGAAACTGCATGTTGGATGAAAAATTCACTGTCAAGGTTGCTGATTTCGGTCTTGCCAGAGACATG  3540

Query  774  TATGATAAAGAATACTATAGTGTACACAACAAAACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAG  847
            ||.||||||||.|||||||||||.||||||||.||.|||||.|||||.|||||.||||||||||||||.||.||
Sbjct 3541  TACGATAAAGAGTACTATAGTGTCCACAACAAGACGGGTGCCAAGCTACCAGTAAAGTGGATGGCTTTAGAGAG  3614

Query  848  TCTGCAAACTCAAAAGTTTACCACCAAGTCAGATGTGTGGTCCTTTGGCGTGCTCCTCTGGGAGCTGATGACAA  921
            |||||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|
Sbjct 3615  TCTGCAAACGCAGAAGTTCACCACCAAGTCAGATGTGTGGTCCTTTGGTGTGCTCCTCTGGGAGCTCATGACGA  3688

Query  922  GAGGAGCCCCACCTTATCCTGACGTAAACACCTTTGATATAACTGTTTACTTGTTGCAAGGGAGAAGACTCCTA  995
            ||||||||||.||||||||.|||||.|||||.||||||||.|||.|.|||.||||||||||.|||||||||.|.
Sbjct 3689  GAGGAGCCCCTCCTTATCCCGACGTGAACACATTTGATATCACTATCTACCTGTTGCAAGGCAGAAGACTCTTG  3762

Query  996  CAACCCGAATACTGCCCAGACCCCTTATATGAAGTAATGCTAAAATGCTGGCACCCTAAAGCCGAAATGCGCCC  1069
            |||||.||||||||.||||||.||||.||.|||||.||||||||||||||||||||.|||||.|||||||||||
Sbjct 3763  CAACCAGAATACTGTCCAGACGCCTTGTACGAAGTGATGCTAAAATGCTGGCACCCCAAAGCGGAAATGCGCCC  3836

Query 1070  ATCCTTTTCTGAACTGGTGTCCCGGATATCAGCGATCTTCTCTACTTTCATTGGGGAGCACTATGTCCATGTGA  1143
            .||||||||.||||||||.|||.|||||||..|.||||||||.||.|||||||||||.|||||.|||||.||||
Sbjct 3837  GTCCTTTTCCGAACTGGTCTCCAGGATATCCTCAATCTTCTCCACGTTCATTGGGGAACACTACGTCCACGTGA  3910

Query 1144  ACGCTACTTATGTGAACGTAAAATGTGTCGCTCCGTATCCTTCTCTGTTGTCATCAGAAGATAACGCTGATGAT  1217
            ||||||||||||||||.|||||||||||.|||||.|||||||||||||||.||||..||||.|||..|||||..
Sbjct 3911  ACGCTACTTATGTGAATGTAAAATGTGTTGCTCCATATCCTTCTCTGTTGCCATCCCAAGACAACATTGATGGC  3984

Query 1218  GAGGTGGACACACGACCAGCCTCCTTCTGGGAGACATCA  1256
            ||||.|.|||||                           
Sbjct 3985  GAGGGGAACACA---------------------------  3996

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