Nucleotide Global Alignment

Description

Query:
TRCN0000492269
Subject:
XM_006502893.3
Aligned Length:
1242
Identities:
1017
Gaps:
135

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTCCTGGTCCTGGGATTTTTGTATTA  74

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAAT--TCAGTG------GTTCTTTCCTTTGA  140
            ||||||.||||||||||||||||||||.||   |||.|||||||.|  .|||.|      |||      ||.||
Sbjct   75  TTCTGCCTGGAAGCTACACTTACTCCAATG---GGAAGACTCCACTCAGCAGAGACACACGTT------TTGGA  139

Query  141  CTCCGCTGGACAAACA-CTAG---------------GCTC---------AGAGTATGATCGGTTGGGCTTCCTC  189
            |         |||.|| ||||               ||.|         .|||||||||.||.|||||||||||
Sbjct  140  C---------CAAGCAGCTAGAGGGAGTGGCCTTCTGCCCTGAGGATGGGGAGTATGATAGGCTGGGCTTCCTC  204

Query  190  CTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCC  263
            |||||.||||||||||||||||||||.||..|||||||||||||||||||||||||.||||||||||||||.||
Sbjct  205  CTGAAGCTGGACTCTAAACTGCCTGCCGAGCTAGCCACCAAGTACGCAAACTTTTCCGAGGGAGCTTGCAAACC  278

Query  264  TGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACT  337
            .|||||.|||||||||.|||||||.||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  279  CGGCTACGCTTCAGCCATGATGACTGCCATCTTCCCCAGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACT  352

Query  338  CCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAA  411
            |||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  353  CCTTTCGCAAGTGGGCTAGGATCCGGGAGTTTGTGCCACCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAA  426

Query  412  GCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCAT  485
            |||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  427  GCCATCTTGTCAGTCACCAAAGAATACCGCCTGACCCCTGCCTTGGACAGCCTCCACTGCCGCCGCTGCATCAT  500

Query  486  CGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGAC  559
            .||.|||||||||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||.|.||||
Sbjct  501  TGTAGGCAATGGAGGGGTCCTCGCCAACAAGTCTCTGGGGTCACGGATTGACGACTATGACATTGTGATCAGAC  574

Query  560  TGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAG  633
            ||||.||||||||.|||||.||||||||||.|||||||||||||||.||.||.||.||||||||||||||.|||
Sbjct  575  TGAACTCAGCACCTGTGAAGGGCTTTGAGAGGGACGTGGGCAGCAAGACCACCCTACGCATCACCTACCCTGAG  648

Query  634  GGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTT  707
            ||||||||||||||.||||||||.||.||.||.||.|||||||||||||||||.||||||||||||||||||||
Sbjct  649  GGCGCCATGCAGCGACCTGAGCAATATGAACGAGACTCTCTCTTTGTCCTCGCTGGCTTCAAGTGGCAGGACTT  722

Query  708  TAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGT--------------------------------------  743
            .||||||.||||.|||||||||||||||||||||||                                      
Sbjct  723  CAAGTGGCTGAAGTACATCGTCTACAAGGAGAGAGTGCCCTTTCCAAGCAAGGCCAAGTGCAGACAGTGTCAAG  796

Query  744  ----------------------------------------------GAGTGCATCGGATGGCTTCTGGAAATCT  771
                                                          |||||||||.||||||||||||||.||.
Sbjct  797  TAGGTAGCGAGCAAGAGAGAAGGCAGAAGTCAGGTCCGGACGCTCAGAGTGCATCTGATGGCTTCTGGAAGTCC  870

Query  772  GTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTT  845
            ||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.|||||
Sbjct  871  GTGGCCACCCGAGTGCCCAAGGAGCCCCCTGAGATCCGCATCCTCAACCCATACTTCATCCAGGAGGCTGCCTT  944

Query  846  CACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAG  919
            |||.||||||||.||||||||||||||.||||||||||||.|.|||||||||||.|||||||||||||||||||
Sbjct  945  CACTCTCATTGGACTGCCCTTCAACAACGGCCTCATGGGCAGAGGGAACATCCCAACCCTTGGCAGTGTGGCAG  1018

Query  920  TGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCA  993
            |||||||||||||||||||||||||.||.|||||||||||.||.||||||||||||||||.|||||||||.|||
Sbjct 1019  TGACCATGGCACTACACGGCTGTGATGAAGTGGCAGTCGCGGGCTTTGGCTATGACATGAACACACCCAATGCA  1092

Query  994  CCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAA  1067
            |||||||||||||||||.||.||.|||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 1093  CCCCTGCACTACTATGAAACTGTGCGCATGGCAGCCATCAAAGAGTCCTGGACACACAACATCCAGCGAGAGAA  1166

Query 1068  AGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC  1125
            ||||||||||||||||||.|||||.||.||.|||||||||||..|||||||.||.|||
Sbjct 1167  AGAGTTTCTGCGGAAGCTAGTGAAGGCACGTGTCATCACTGACTTAAGCAGCGGTATC  1224

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