Nucleotide Global Alignment

Description

Query:
TRCN0000492269
Subject:
XM_006502899.3
Aligned Length:
1234
Identities:
765
Gaps:
392

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTCCTGGTCCTGGGATTTTTGTATTA  74

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCA------------------------------  118
            ||||||.||||||||||||||||||||.||   |||.|||||||                              
Sbjct   75  TTCTGCCTGGAAGCTACACTTACTCCAATG---GGAAGACTCCACTCAGCAGAGACACACGTTTTGGACCAAGC  145

Query  119  ------------------------------------ATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACA  156
                                                |||||.||.||||||||.|||||||||||||||||||.
Sbjct  146  AGCTAGAGGGAGTGGCCTTCTGCCCTGAGGATGGGGATTCATTGCTTCTTTCCCTTGACTCCGCTGGACAAACC  219

Query  157  CTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAA  230
            ||||||.|||||||||||.||.||||||||||||||||.||||||||||||||||||||.||..||||||||||
Sbjct  220  CTAGGCACAGAGTATGATAGGCTGGGCTTCCTCCTGAAGCTGGACTCTAAACTGCCTGCCGAGCTAGCCACCAA  293

Query  231  GTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGT  304
            |||||||||||||||.||||||||||||||.||.|||||.|||||||||.|||||||.||||||||||||.|||
Sbjct  294  GTACGCAAACTTTTCCGAGGGAGCTTGCAAACCCGGCTACGCTTCAGCCATGATGACTGCCATCTTCCCCAGGT  367

Query  305  TCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCT  378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||.|||
Sbjct  368  TCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGGATCCGGGAGTTTGTGCCACCT  441

Query  379  TTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGC  452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  442  TTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAATACCGCCTGACCCCTGC  515

Query  453  CTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGT  526
            ||||||||||||||.||||||||||||||||||.||.|||||||||||.||.||.|||||||||||||||||||
Sbjct  516  CTTGGACAGCCTCCACTGCCGCCGCTGCATCATTGTAGGCAATGGAGGGGTCCTCGCCAACAAGTCTCTGGGGT  589

Query  527  CACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGC  600
            ||||.|||||||||||||||||||||.|.||||||||.||||||||.|||||.||||||||||.||||||||||
Sbjct  590  CACGGATTGACGACTATGACATTGTGATCAGACTGAACTCAGCACCTGTGAAGGGCTTTGAGAGGGACGTGGGC  663

Query  601  AGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCT  674
            |||||.||.||.||.||||||||||||||.|||||||||||||||||.||||||||.||.||.||.||.|||||
Sbjct  664  AGCAAGACCACCCTACGCATCACCTACCCTGAGGGCGCCATGCAGCGACCTGAGCAATATGAACGAGACTCTCT  737

Query  675  CTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTG----  744
            ||||||||||||.||||||||||||||||||||.||||||.||||.||||||||||||||||||||||||    
Sbjct  738  CTTTGTCCTCGCTGGCTTCAAGTGGCAGGACTTCAAGTGGCTGAAGTACATCGTCTACAAGGAGAGAGTGCCCT  811

Query  745  ---------------AGTGCATCGGATGGCTTCTGGAAATCTGTGGCCA-CTCGAGTGCCCAAGG----AGCCC  798
                           ||||||   ||..|..||   ||.|..||.||.| |..|||.|   ||||    ||   
Sbjct  812  TTCCAAGCAAGGCCAAGTGCA---GACAGTGTC---AAGTAGGTAGCGAGCAAGAGAG---AAGGCAGAAG---  873

Query  799  CCTGAGATTCGAATCCTCA-AC----------CCATAT-TTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCT  860
              |.||.|.||.|..|||| ||          |||||| |||||           |||||.|            
Sbjct  874  --TCAGGTCCGGACGCTCAGACCATGGGTCTACCATATGTTCAT-----------CCTTCCC------------  922

Query  861  GCCCTTCAACA-----ATGGCCTCATGGGCCGGGGGAACA--TCCCTACCCTTGGCAGTGTGGCAGTGACCATG  927
                  |||||     |||     .|||.|       |||  ||||.                           
Sbjct  923  ------CAACACATATATG-----TTGGTC-------ACACGTCCCA---------------------------  951

Query  928  GCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCA  1001
                                                                                      
Sbjct  952  --------------------------------------------------------------------------  951

Query 1002  CTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTC  1075
                                                                                      
Sbjct  952  --------------------------------------------------------------------------  951

Query 1076  TGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC  1125
                                                              
Sbjct  952  --------------------------------------------------  951

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