Nucleotide Global Alignment

Description

Query:
TRCN0000492269
Subject:
XR_376301.3
Aligned Length:
2204
Identities:
868
Gaps:
1269

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGGAGTCACCAAGAGTAGCGGTTGTCATCTCTGCCTTCCCCGGGGCCAGATCCTCCTCGGAGCGACCGGGTC  74

Query    1  -----------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCTGCTG  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct   75  AGTTTATCAAAGTCATGTAGGAAATTGTGAGTCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCTGCTG  148

Query   34  CTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGA  107
            |||||||||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||||||||.||   
Sbjct  149  CTAGCCCTCTGCCTCTTCCTGGTCCTGGGATTTTTGTATTATTCTGCCTGGAAGCTACACTTACTCCAATG---  219

Query  108  GGAGGACTCCA---------------------------------------------------------------  118
            |||.|||||||                                                               
Sbjct  220  GGAAGACTCCACTCAGCAGAGACACACGTTTTGGACCAAGCAGCTAGAGGGAGTGGCCTTCTGCCCTGAGGATG  293

Query  119  ---ATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTC  189
               |||||.||.||||||||.|||||||||||||||||||.||||||.|||||||||||.||.|||||||||||
Sbjct  294  GGGATTCATTGCTTCTTTCCCTTGACTCCGCTGGACAAACCCTAGGCACAGAGTATGATAGGCTGGGCTTCCTC  367

Query  190  CTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCC  263
            |||||.||||||||||||||||||||.||..|||||||||||||||||||||||||.||||||||||||||.||
Sbjct  368  CTGAAGCTGGACTCTAAACTGCCTGCCGAGCTAGCCACCAAGTACGCAAACTTTTCCGAGGGAGCTTGCAAACC  441

Query  264  TGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACT  337
            .|||||.|||||||||.|||||||.||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  442  CGGCTACGCTTCAGCCATGATGACTGCCATCTTCCCCAGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACT  515

Query  338  CCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAA  411
            |||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  516  CCTTTCGCAAGTGGGCTAGGATCCGGGAGTTTGTGCCACCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAA  589

Query  412  GCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCAT  485
            |||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  590  GCCATCTTGTCAGTCACCAAAGAATACCGCCTGACCCCTGCCTTGGACAGCCTCCACTGCCGCCGCTGCATCAT  663

Query  486  CGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGAC  559
            .||.|||||||||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||       
Sbjct  664  TGTAGGCAATGGAGGGGTCCTCGCCAACAAGTCTCTGGGGTCACGGATTGACGACTATGACATTGTG-------  730

Query  560  TGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAG  633
                                                                       ||||           
Sbjct  731  -----------------------------------------------------------ATCA-----------  734

Query  634  GGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTT  707
                                                                                      
Sbjct  735  --------------------------------------------------------------------------  734

Query  708  TAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTC  781
                                                |||||||||.||||||||||||||.||.||||||||.|
Sbjct  735  ------------------------------------GAGTGCATCTGATGGCTTCTGGAAGTCCGTGGCCACCC  772

Query  782  GAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATT  855
            |||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.||||||||.||||||
Sbjct  773  GAGTGCCCAAGGAGCCCCCTGAGATCCGCATCCTCAACCCATACTTCATCCAGGAGGCTGCCTTCACTCTCATT  846

Query  856  GGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGC  929
            ||.||||||||||||||.||||||||||||.|.|||||||||||.|||||||||||||||||||||||||||||
Sbjct  847  GGACTGCCCTTCAACAACGGCCTCATGGGCAGAGGGAACATCCCAACCCTTGGCAGTGTGGCAGTGACCATGGC  920

Query  930  ACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACT  1003
            |||||||||||||||.||.|||||||||||.||.||||||||||||||||.|||||||||.|||||||||||||
Sbjct  921  ACTACACGGCTGTGATGAAGTGGCAGTCGCGGGCTTTGGCTATGACATGAACACACCCAATGCACCCCTGCACT  994

Query 1004  ACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTG  1077
            |||||||.||.||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct  995  ACTATGAAACTGTGCGCATGGCAGCCATCAAAGAGTCCTGGACACACAACATCCAGCGAGAGAAAGAGTTTCTG  1068

Query 1078  CGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC--------------------------  1125
            ||||||||.|||||.||.||.|||||||||||..|||||||.||.|||                          
Sbjct 1069  CGGAAGCTAGTGAAGGCACGTGTCATCACTGACTTAAGCAGCGGTATCTGAGTGGGCCGGACACCAGGCCAGAG  1142

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1143  AGGCTCACGCCAGGACCAAGCAGCTGCCACCTGCACAGGAGCCTTCCCACCCAGAGAGGGACAGTGCCAAGAGA  1216

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1217  CCCGAGGGCCAGTGAGGCCTTGGCAAGGCAACCAGAGCTGTGCCCACTGCAGGCCAGCTTCAGAGACCAGCACC  1290

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1291  CTGCCTTGCTGCCTGGGTCCATGAAGCCAGAGGGCCAGGAGGCCACTGGCTGTGGCCAGCAGGCCCAGCATGCA  1364

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1365  GGAGGTGGGACATTTGGTAGCAAGAATGCTACCAGAATCATTTCTCTAATCAGTGTTTGGTGTATTATCATTTT  1438

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1439  GTGAATTTGGGTATGGGGAGGGGAGGGATAATTTATTTTTAAATTAGATGTCACATTTGGTCCACTTGTTGTGC  1512

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1513  AGAAAGAGGCCCACTAGAGGGCCCATCAGACAGTGGTACCAGTGAACTCCCTGAAGGATGGAGGTGTGGTGACC  1586

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1587  ATGCTTCAGGGACCGGGAGGTGGATAGCATCTCATGTCAGCCATCTCCAGCTCACGACACTCTTTGGCCTTCCT  1660

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1661  TGGGGAGAAGATGAAGTACTCCCTCTCACCAGCCACCAGTGTCCCACAGGGGAACCCCAGAGCCATCCCTTTAA  1734

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1735  AGCCAACAGGACAGCTCTTGGACAAGAGCAGAGAGAACTCAGGAGGCAAGGCCCAGCCCAGCCTGACGGGAATG  1808

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1809  AATGGCTCCGTCCATAGCTGTCCCTAATCCATGGGGCAGTAATCCTTCCTGAACTGTCAGATGGTCTGGGTTTC  1882

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1883  TTGCTGGGACTGCCAGCTCCATGGGTCCTACCCAGGACCAGAGGGAAGTGAGGCTCCAGGACCTCACCCAGGCT  1956

Query 1126  ----------------------------------------------------------  1125
                                                                      
Sbjct 1957  GCCGCAGCCAGCCGGGGCAGCTCTCACGGAAGCAATAAAGCTCTCCTCTGAATCTGGC  2014

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