Nucleotide Global Alignment

Description

Query:
TRCN0000492269
Subject:
XR_376302.3
Aligned Length:
2138
Identities:
825
Gaps:
1251

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGGAGTCACCAAGAGTAGCGGTTGTCATCTCTGCCTTCCCCGGGGCCAGATCCTCCTCGGAGCGACCGGGTC  74

Query    1  -----------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCTGCTG  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct   75  AGTTTATCAAAGTCATGTAGGAAATTGTGAGTCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCTGCTG  148

Query   34  CTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGA  107
            |||||||||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||||||||.||   
Sbjct  149  CTAGCCCTCTGCCTCTTCCTGGTCCTGGGATTTTTGTATTATTCTGCCTGGAAGCTACACTTACTCCAATG---  219

Query  108  GGAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGG  181
            |||.|||||||                                                ||||||||.||.|||
Sbjct  220  GGAAGACTCCA------------------------------------------------AGTATGATAGGCTGG  245

Query  182  GCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCT  255
            |||||||||||||.||||||||||||||||||||.||..|||||||||||||||||||||||||.|||||||||
Sbjct  246  GCTTCCTCCTGAAGCTGGACTCTAAACTGCCTGCCGAGCTAGCCACCAAGTACGCAAACTTTTCCGAGGGAGCT  319

Query  256  TGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCT  329
            |||||.||.|||||.|||||||||.|||||||.||||||||||||.||||||||||||||||||||||||||||
Sbjct  320  TGCAAACCCGGCTACGCTTCAGCCATGATGACTGCCATCTTCCCCAGGTTCTCCAAGCCAGCACCCATGTTCCT  393

Query  330  GGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATC  403
            |||||||||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct  394  GGATGACTCCTTTCGCAAGTGGGCTAGGATCCGGGAGTTTGTGCCACCTTTTGGGATCAAAGGTCAAGACAATC  467

Query  404  TGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGC  477
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||
Sbjct  468  TGATCAAAGCCATCTTGTCAGTCACCAAAGAATACCGCCTGACCCCTGCCTTGGACAGCCTCCACTGCCGCCGC  541

Query  478  TGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGT  551
            ||||||||.||.|||||||||||.||.||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct  542  TGCATCATTGTAGGCAATGGAGGGGTCCTCGCCAACAAGTCTCTGGGGTCACGGATTGACGACTATGACATTGT  615

Query  552  GGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAACGACACTGCGCATCACCT  625
            |                                                                  ||||   
Sbjct  616  G------------------------------------------------------------------ATCA---  620

Query  626  ACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGG  699
                                                                                      
Sbjct  621  --------------------------------------------------------------------------  620

Query  700  CAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATCGGATGGCTTCTGGAAATCTGT  773
                                                        |||||||||.||||||||||||||.||.||
Sbjct  621  --------------------------------------------GAGTGCATCTGATGGCTTCTGGAAGTCCGT  650

Query  774  GGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAACCCATATTTCATCCAGGAGGCCGCCTTCA  847
            ||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.|||||||
Sbjct  651  GGCCACCCGAGTGCCCAAGGAGCCCCCTGAGATCCGCATCCTCAACCCATACTTCATCCAGGAGGCTGCCTTCA  724

Query  848  CCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACATCCCTACCCTTGGCAGTGTGGCAGTG  921
            |.||||||||.||||||||||||||.||||||||||||.|.|||||||||||.|||||||||||||||||||||
Sbjct  725  CTCTCATTGGACTGCCCTTCAACAACGGCCTCATGGGCAGAGGGAACATCCCAACCCTTGGCAGTGTGGCAGTG  798

Query  922  ACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGCTATGACATGAGCACACCCAACGCACC  995
            |||||||||||||||||||||||.||.|||||||||||.||.||||||||||||||||.|||||||||.|||||
Sbjct  799  ACCATGGCACTACACGGCTGTGATGAAGTGGCAGTCGCGGGCTTTGGCTATGACATGAACACACCCAATGCACC  872

Query  996  CCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTGGACGCACAATATCCAGCGAGAGAAAG  1069
            |||||||||||||||.||.||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct  873  CCTGCACTACTATGAAACTGTGCGCATGGCAGCCATCAAAGAGTCCTGGACACACAACATCCAGCGAGAGAAAG  946

Query 1070  AGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC------------------  1125
            ||||||||||||||||.|||||.||.||.|||||||||||..|||||||.||.|||                  
Sbjct  947  AGTTTCTGCGGAAGCTAGTGAAGGCACGTGTCATCACTGACTTAAGCAGCGGTATCTGAGTGGGCCGGACACCA  1020

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1021  GGCCAGAGAGGCTCACGCCAGGACCAAGCAGCTGCCACCTGCACAGGAGCCTTCCCACCCAGAGAGGGACAGTG  1094

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1095  CCAAGAGACCCGAGGGCCAGTGAGGCCTTGGCAAGGCAACCAGAGCTGTGCCCACTGCAGGCCAGCTTCAGAGA  1168

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1169  CCAGCACCCTGCCTTGCTGCCTGGGTCCATGAAGCCAGAGGGCCAGGAGGCCACTGGCTGTGGCCAGCAGGCCC  1242

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1243  AGCATGCAGGAGGTGGGACATTTGGTAGCAAGAATGCTACCAGAATCATTTCTCTAATCAGTGTTTGGTGTATT  1316

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1317  ATCATTTTGTGAATTTGGGTATGGGGAGGGGAGGGATAATTTATTTTTAAATTAGATGTCACATTTGGTCCACT  1390

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1391  TGTTGTGCAGAAAGAGGCCCACTAGAGGGCCCATCAGACAGTGGTACCAGTGAACTCCCTGAAGGATGGAGGTG  1464

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1465  TGGTGACCATGCTTCAGGGACCGGGAGGTGGATAGCATCTCATGTCAGCCATCTCCAGCTCACGACACTCTTTG  1538

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1539  GCCTTCCTTGGGGAGAAGATGAAGTACTCCCTCTCACCAGCCACCAGTGTCCCACAGGGGAACCCCAGAGCCAT  1612

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1613  CCCTTTAAAGCCAACAGGACAGCTCTTGGACAAGAGCAGAGAGAACTCAGGAGGCAAGGCCCAGCCCAGCCTGA  1686

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1687  CGGGAATGAATGGCTCCGTCCATAGCTGTCCCTAATCCATGGGGCAGTAATCCTTCCTGAACTGTCAGATGGTC  1760

Query 1126  --------------------------------------------------------------------------  1125
                                                                                      
Sbjct 1761  TGGGTTTCTTGCTGGGACTGCCAGCTCCATGGGTCCTACCCAGGACCAGAGGGAAGTGAGGCTCCAGGACCTCA  1834

Query 1126  ------------------------------------------------------------------  1125
                                                                              
Sbjct 1835  CCCAGGCTGCCGCAGCCAGCCGGGGCAGCTCTCACGGAAGCAATAAAGCTCTCCTCTGAATCTGGC  1900

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