Nucleotide Global Alignment

Description

Query:
TRCN0000492301
Subject:
XM_006537928.2
Aligned Length:
1747
Identities:
918
Gaps:
713

Alignment

Query    1  ATGATCCACTTTCGGAGCTCCAGCGTCAAATCGCTCAGCCAGGAGATGAGATGCACCATCCGGCTGCTGGACGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCGGAGATCTCCTGCCACATCCAGAGGGAAACCAAAGGGCAGTTTCTCATTGACCACATCTGCAACTACTACA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCCTGCTGGAGAAGGACTACTTTGGCATTCGCTATGTGGACCCAGAGAAGCAAAGGCACTGGCTTGAACCTAAC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AAGTCCATCTTCAAGCAAATGAAAACTCATCCACCATACACCATGTGCTTTAGAGTGAAATTCTACCCACATGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ACCCTTGAAGATTAAAGAAGAGCTCACAAGATACCTTTTATACCTTCAGATTAAAAGGGACATTTTTCATGGCC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACCTGCTGTGCTCCTTTTCTGATGCTGCCTACCTGGGTGCCTGTATTGTTCAAGCTGAGCTTGGTGATTACGAT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CCTAATGAGCATCCTGAGAATTACATCAGTGAGTTTGAGATTTTCCCCAAGCAGTCACAGAAGCTGGAAAGAAA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AATAGTGGAAATTCATAAAAATGAACTCAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  CTCACACTTTGGAAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGA  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  TTCACAGCTGCAGGCTTTGTGGT--CTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGC  738
                            .||||.|  |||              .||||||||     ..|.||.|||||||||||
Sbjct    1  ----------------ATGTGTTTACTT--------------CAATCCATT-----CCAGGGTCAGATGTCTGC  39

Query  739  AAATTGAAGTTTGAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCAA  812
            |||||||||||||||||||||||||||||.||||||||..|||||||.||||||||.||..|.|||||||||.|
Sbjct   40  AAATTGAAGTTTGAAGGGAAGACATTTTACGTGATTGGTTCCCAGAAAGAGAAAAATGCTGTTTTGGCATTCCA  113

Query  813  TACTTCAACACCAGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGCAA  886
            |||.||||||||||||||||||||||||.|.|||||.|||||.||.||||||||.|||||||||||||||||||
Sbjct  114  TACATCAACACCAGCTGCCTGCAAACATTTATGGAAATGTGGGGTAGAAAACCAAGCCTTTTATAAGTATGCAA  187

Query  887  AATCCAGTCAGATCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGTGGGAAA  960
            |.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.|||
Sbjct  188  AGTCCAGTCAGATCAAGACTGTGTCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATACAGTGGTAAA  261

Query  961  GTTGCCAAAGAGGTGGTGGAGGCCAGTTCCAAGATCCAGAGGGAGCCTCCTGAGGTGCACAGAGCCAACATTAC  1034
            |||||.|||||||||||.|||||.||.|||||.|||||||||||.||||||||.|||||.||||.|||||||||
Sbjct  262  GTTGCTAAAGAGGTGGTAGAGGCAAGCTCCAAAATCCAGAGGGATCCTCCTGAAGTGCATAGAGTCAACATTAC  335

Query 1035  TCAGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATGGAACCCCTGCAGCCCCTGCTTCCTT  1108
            ||||||.|||||.|..||||||||||||||||||||||||||.|||||||||||..||||||||||||||||||
Sbjct  336  TCAGAGTCGCAGCTTTCACTCCTTGAACAAACAGCTCATCATCAACATGGAACCTTTGCAGCCCCTGCTTCCTT  409

Query 1109  CCCCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTAAAGAGGA-GAACATTTCTGC  1181
            ||||||..||.||.|||||||||.|||||.|||||||||||||.|||.||||||||..||| |    |.||||.
Sbjct  410  CCCCCACTGAACAGGAAGAAGAAGTTCCTGTGGGTGAGGGTGTCCCACTGCCTAAAATGGATG----TGTCTGA  479

Query 1182  TCCCTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCTAG-TGAAGAGGAAGATAAA  1254
            .|||.|.||..|||||||.||||||||||.|||.|   |||.||.||||||.|| || ||||||||||||||.|
Sbjct  480  GCCCCTAATTGCCAGCTCACCAGTGAAGGGAGCAC---AGTGTGCAGATCCTCC-AGATGAAGAGGAAGATAGA  549

Query 1255  ATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCTGCTCCCCACCCCTGTGGA  1328
            .||||||||||.||.||.||||||||||||||||.||||||.||.||.|||||||||||.||.|||||.|||||
Sbjct  550  GTAAAAGAAGACCCCTTGACCATCTCTGAACTAGCGTACAATCCCAGCGCCAGCCTGCTTCCTACCCCAGTGGA  623

Query 1329  TGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAGAAGACACAGATTCATTTG  1402
            |||.|||||.||..|||||||||||||||||||.||.|||||||||||.||||||||||||||.||||||||||
Sbjct  624  TGATGATGAAATCAACATGCTCTTTGACTGTCCATCCAGGCTTGAGTTAGAAAGAGAAGACACGGATTCATTTG  697

Query 1403  AGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAGGAGGCTCGCCGTGCTTTG  1476
            ||||.||.||||||||||||||.||.|||||||||||||||||.||||||||||||||.|||||||..||||||
Sbjct  698  AGGAACTTGAAGCAGATGAAAATGCTTTTTTGATTGCTGAAGAGGAGGAGCTGAAGGAAGCTCGCCAAGCTTTG  771

Query 1477  TCGTGGAGCTACGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAGTTTTTCCAGGCTCCTTGT  1550
            ||.||||||||....||.|||||.||||||||..||||.|||||.||||||||||||||.||||||||||||||
Sbjct  772  TCATGGAGCTATTCAATCCTGACCGGCCATATCTGGGTCAACCCCCTGGTCAAGAGTTTCTCCAGGCTCCTTGT  845

Query 1551  GGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAGGTATTGATCTCTCCT  1624
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  846  GGTGGGCCTGGGACTGCTGCTGTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAGGTATTGATCTCTCCT  919

Query 1625  TCTTATGCGAAATCCGCCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTACTGTCCCCTCAAGGAGTGG  1698
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||.||.|||||||||
Sbjct  920  TCTTATGCGAAATCCGTCAGACACCAGAGTTTGAGCAGTTTCACTATGAATACTATTGTCCTCTGAAGGAGTGG  993

Query 1699  GTGGCTGGGAAAGTCCACCTCATCCTCTACATGCTGGGTTGCTCA  1743
            |||||||||||.|||.||.||.|||||||||||||||||||.|||
Sbjct  994  GTGGCTGGGAAGGTCAACATCGTCCTCTACATGCTGGGTTGTTCA  1038

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