Nucleotide Global Alignment

Description

Query:
ccsbBroad304_00472
Subject:
XM_011241672.1
Aligned Length:
1783
Identities:
1266
Gaps:
222

Alignment

Query    1  ATGTTTGGGATTCAGGAAAGCATCCAACG-GAGTGGAAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGA  73
            |||||||||||||||||.|..||.|..|| |.|.|||.| |.|||||||||.||||||||||||||||||||||
Sbjct    1  ATGTTTGGGATTCAGGAGAATATTCCGCGCGGGGGGACG-ACCATGAAGGAGGAGCCGCTGGGCAGCGGCATGA  73

Query   74  ACGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCTG  147
            ||.|||||||..||||||||||....||.||.|||.||||||||||||||||.||.||||||||.|||||.|||
Sbjct   74  ACCCGGTGCGCTCGTGGATGCACACGGCAGGCGTGGTGGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCTG  147

Query  148  GCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCT  221
            ||.|||||.|||||.|||||||||||.||||||||.||.|||||||||||.||||||||||||||.|||||.||
Sbjct  148  GCGCGGGCGCACTTCGAGAAGCAGCCTCCTTCCAACCTCCGGAAATCCAATTTCTTCCACTTCGTGCTGGCGCT  221

Query  222  CTACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAG  295
            |||||||||.|||||.|||||.|||||||||||.|||||.||.|||||||..||.||||||||.||.|||| ||
Sbjct  222  CTACGACAGGCAGGGGCAGCCGGTGGAGATCGAAAGGACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAG-AG  294

Query  296  CC-AACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGGA  368
            || ||||.|||.||.|||||.|||||.|||||||||..|||.|||||.||.|||||||||||..|.||.||.||
Sbjct  295  CCGAACAACGAGAAAACCAACAACGGCATTCACTACAAGCTGCAGCTACTGTACAGCAATGGCGTCAGAACAGA  368

Query  369  GCAGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACC  442
            |||.|||.|.||.||.||||||||.||.||.|||||.|||||.|||||.||||||||||||||.||||||||.|
Sbjct  369  GCAAGATCTGTATGTCCGCCTCATAGATTCAATGACCAAACAGGCCATCGTGTATGAAGGCCAGGACAAGAATC  442

Query  443  CAGAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAAC  516
            |.||.||||||||.||..||||.||.||.|||||||||||||||||.||.|||||||||||.||.||||||||.
Sbjct  443  CGGAGATGTGCCGCGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAGAGTTGTGGCAAT  516

Query  517  CGAAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAA  590
            .||||.|||||.||||||||.||.||.||.||||||||.|||||..|.||.||.||||||||.||.||.||.||
Sbjct  517  AGAAACGAGACACCCTCAGACCCTGTAATCATTGACAGATTCTTTCTAAAGTTCTTCCTCAAGTGCAATCAGAA  590

Query  591  TTGCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGG  664
            .|||||.|||||||||||.|||||.||.|||||||||||.|||||||||||.||.||.||.||||||||.||||
Sbjct  591  CTGCCTGAAGAATGCGGGCAACCCTCGGGACATGCGGAGGTTCCAGGTCGTTGTATCGACAACAGTCAACGTGG  664

Query  665  ATGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGG  738
            |.|||||.||.|||||.||.|||||.|||||||||||.||.||.||||||||.||.|||.||.||||.||..|.
Sbjct  665  ACGGCCACGTGCTGGCCGTGTCTGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCCGC  738

Query  739  CTTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACATGCTACTCCCTGTATCAAAGCCATCAGCCCGAGTGA  812
            ||.|||||.||.|||                        ||.|||||.||||||||.||.||||||||.|||||
Sbjct  739  CTAGACCCGTCAGAA------------------------GCCACTCCGTGTATCAAGGCTATCAGCCCCAGTGA  788

Query  813  AGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATTCG  886
            |||.|||||.|||||.|||||.|||||||||||.||.||||||||.||||||||.||..||||.||..|.||||
Sbjct  789  AGGCTGGACCACGGGGGGTGCCACTGTGATCATAATCGGGGACAACTTCTTTGACGGTCTACAAGTTGTGTTCG  862

Query  887  GTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATCCCT  960
            |.||.|||.||||.|||||||||.||||.||.||.||.||||||||.||||||||.||.|||||.|||||||||
Sbjct  863  GAACTATGTTGGTGTGGAGTGAGCTGATAACCCCCCACGCCATCCGAGTGCAGACGCCGCCTCGACACATCCCT  936

Query  961  GGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTATAC  1034
            ||.|||||.|||||.||.||.||||||||.||||||||||||||||||||..|.||.||..|.||..|.||.||
Sbjct  937  GGAGTTGTTGAAGTGACCCTCTCCTACAAGTCTAAGCAGTTCTGCAAAGGCGCTCCTGGACGCTTTGTCTACAC  1010

Query 1035  AGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGACC  1108
            .||.||.||.||.||.|||||.|||||.||.|||||||||||.|||||.||.||.||..|.||.||.|||||||
Sbjct 1011  TGCCCTTAATGAGCCAACCATAGATTACGGCTTCCAGAGGTTGCAGAAAGTGATACCCAGACATCCAGGTGACC  1084

Query 1109  CTG--AGCGTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCACA  1180
            |.|  || |||.||.||||||||..||||.||.|||||.||.||.||.||.|||||..|||||||||||||.||
Sbjct 1085  CCGAAAG-GTTACCCAAGGAAGTGTTACTGAAGAGGGCAGCAGACCTTGTGGAAGCCTTGTATGGGATGCCTCA  1157

Query 1181  CAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCACA  1254
            |||.||||||||.|||||.|||||||||||||||||||||||.|||||..|||||||.|||||||||||.||||
Sbjct 1158  CAATAACCAGGAGATCATCCTGAAGAGAGCGGCCGACATTGCTGAGGCGTTGTACAGCGTTCCCCGCAATCACA  1231

Query 1255  ACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACTG  1328
            ||||..||||..||||.|..||||||.|.|..|||.|.||.||||||||.|||||.||.|||||..|.||.||.
Sbjct 1232  ACCAGATCCCCACCCTGGGCAACACCCCAGCACACACTGGCATGATGGGTGTGAACTCCTTCAGCAGCCAGCTA  1305

Query 1329  GCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCAGCGTATCACCACA  1402
            |||||.|||||.||.|||.|.||||||||                                             
Sbjct 1306  GCCGTTAATGTGTCAGAGACCTCACAAGC---------------------------------------------  1334

Query 1403  CGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACGGATACGGCT  1476
                                                                                      
Sbjct 1335  --------------------------------------------------------------------------  1334

Query 1477  CTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATA  1550
                  |||||.||||                                                       .||
Sbjct 1335  ------CAATGACCAA-------------------------------------------------------GTA  1347

Query 1551  GTGCCATCCAGCCCCACCATGGCCTCCTC------CACAAGCCTCCCCTCCAACTGCAGCAGCTC-CTCGGGCA  1617
            |||||.|||||||||||||||||..||||      |||   ||||||.||.|||||.||||||.| |.| ||||
Sbjct 1348  GTGCCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCAC---CCTCCCTTCAAACTGTAGCAGCACACAC-GGCA  1417

Query 1618  TCTTCTCCTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCC  1691
            |.|||||.||||||||.|||||..|..||||.||.||||||||||||||.|||||.||.||.||.|||.|.|||
Sbjct 1418  TTTTCTCATTCTCACCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGCGCTTTTGCGCCCGTGGTCCGGCCC  1491

Query 1692  CAGACCTCCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGATTGTTCC  1765
            ||..||||.||.|||||..|||||||||||.|||||||||||.|.||||||||.||.|||||..||.|.||.||
Sbjct 1492  CAAGCCTCGCCTCCTCCTTCCTGCACCAGCGCCAACGGGAACGGACTGCAAGCTATGTCTGGGCTGGTAGTCCC  1565

Query 1766  TCCTATG  1772
            .||.|||
Sbjct 1566  GCCCATG  1572

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