Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_00472
- Subject:
- XM_017009199.1
- Aligned Length:
- 1818
- Identities:
- 1139
- Gaps:
- 673
Alignment
Query 1 ATGTTTGGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCTGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTGCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TACGACAGACAGGGCCAGCCCGTGGAGATCGAGAGGACAGCGTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGGAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACCCA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAATGTGCCGAGTCTTGCTCACACATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAACCG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AAATGAGACTCCCTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAATTTTTCCTCAAATGTAACCAAAATT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCTAAAGAATGCGGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGAT 666
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -----------------------------ATGCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGAT 45
Query 667 GGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGGCT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46 GGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCGGAGGCT 119
Query 741 TGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACAT---GCTACTCCCTGTATCAAAGCCATCAGCCCGAGTG 811
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 120 TGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACATGCAGCTACTCCCTGTATCAAAGCCATCAGCCCGAGTG 193
Query 812 AAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATTC 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 AAGGATGGACGACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATTC 267
Query 886 GGTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATCCC 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 268 GGTACCATGCTGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCAGACCCCTCCTCGGCACATCCC 341
Query 960 TGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTATA 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 TGGTGTTGTGGAAGTCACACTGTCCTACAAATCTAAGCAGTTCTGCAAAGGAACACCAGGCAGATTCATTTATA 415
Query 1034 CAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGAC 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CAGCGCTCAACGAACCCACCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGAC 489
Query 1108 CCTGAGCG-TTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCACA 1180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 490 CCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCACA 563
Query 1181 CAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCACA 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 564 CAACAACCAGGAAATCATTCTGAAGAGAGCGGCCGACATTGCCGAGGCCCTGTACAGTGTTCCCCGCAACCACA 637
Query 1255 ACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACTG 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 638 ACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACTG 711
Query 1329 GCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCAGCGTATCACCACA 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 GCCGTGAATGTCTCCGAGGCATCACAAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCAGCGTATCACCACA 785
Query 1403 CGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACGGATACGGCT 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 786 CGGGTACGTGCCGAGCACCACTCCCCAGCAGACCAACTATAACTCCGTCACCACGAGCATGAACGGATACGGCT 859
Query 1477 CTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 860 CTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATA 933
Query 1551 GTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCTTCTC 1624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 934 GTGCCATCCAGCCCCACCATGGCCTCCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCTTCTC 1007
Query 1625 CTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAGACCT 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1008 CTTCTCACCAGCCAACATGGTCTCAGCCGTGAAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAGACCT 1081
Query 1699 CCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAGCGATATCTGGCATGATTGT---------- 1762
||||||||||||||||||||||||||||||||||||||||||||| |||.|.|.| ||||
Sbjct 1082 CCCCACCTCCCACCTGCACCAGCACCAACGGGAACAGCCTGCAAG----ATCAGTCTT--TTGTGGACTCTAGC 1149
Query 1763 ---TCCTCCTATG----------------------------- 1772
|.||||..||
Sbjct 1150 AAGTTCTCCAGTGCAGGGTCTCTCCCGGGACTGGCCTTCTCC 1191
