Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01017
Subject:
XM_006505684.2
Aligned Length:
1594
Identities:
1080
Gaps:
374

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGTCCGAATCGGGAATCGTGGCGGATTTCGAAGTCGGGGAGGAGTTTCACGAAGAACCCAAAACCTATTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGAACTCAAAAGTCAACCTCTGAAGAGCAGTTCTGCAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCACTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGCAGCAGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGT  296

Query    1  ----------------------------------ATGC---TGGAAATGCTAGAATATAATCACTATCAGGTGC  37
                                              .|||   |||||.|.||               |.||||||
Sbjct  297  CAGCGTGCCCACCACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGTCCT---------------TAAGGTGC  355

Query   38  AGACCCACCTCGAAAACCCCACCAAGTACCACATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTACCTTTCT  111
            ||||||||||.||||||||||||||||||||||||||||||||.||..||||.|||||||||||||||||||||
Sbjct  356  AGACCCACCTGGAAAACCCCACCAAGTACCACATACAGCAAGCTCAGAGGCACCAGGTAAAGCAGTACCTTTCT  429

Query  112  ACCACTTTAGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCAT  185
            |||||||||||||||||||||||||.||||||||||||||..|||||||||||||||||||||||.||||.|||
Sbjct  430  ACCACTTTAGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACCATGCCAT  503

Query  186  GCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATGCTTACGCTTAACTCCAACTGTGAAAAAG  259
            ||||||.|||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||||
Sbjct  504  GCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCTCACTCTTAACTCCAACTGTGAAAAAG  577

Query  260  AGGGATTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCAGGCATGAACACACATTCACGAGCG  333
            |||.|||||||||||||||.|||||.|.||||||||||||.|||||||||||.||||||||.||.||.||||||
Sbjct  578  AGGCATTTTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCG  651

Query  334  TCCTGTATGCAGATGGATGATGTAATCGATGACATCATTAGCCTAGAATCAAGTTATAATGAGGAAATCTTGGG  407
            ||.||.||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||.|||||.|||||
Sbjct  652  TCGTGCATGCAGATGGATGATGTAATTGATGACATCATCAGCCTGGAATCAAGTTATAATGAAGAAATTTTGGG  725

Query  408  CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACC  481
            ||||||||||||.||.||||||||||||||||||||.||.|||||.|||||||||||.||.||.||..|.||||
Sbjct  726  CTTGATGGATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCTCTGGAAACTTGATCGACCTCTACAGCAACC  799

Query  482  AAGGTCTGCCCCCACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT-  554
            |.||.|||||.||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  800  AGGGCCTGCCACCGCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCTC  873

Query  555  -----------------CACAGAGTCTGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAAGGACAATCACAA  611
                             ||||||||||||||||||||||.||||.|||||||||||||||||||||||||||||
Sbjct  874  ACAGCGTGTATTTTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGGCAGAAAAAGGACAATCACAA  947

Query  612  CCTGATTGAACGAAGAAGAAGATTTAACATAAATGACCGCATTAAAGAACTAGGTACTTTGATTCCCAAGTCAA  685
            |.|||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||.||||.||||||||||
Sbjct  948  CTTGATTGAACGAAGAAGAAGATTTAACATAAACGACCGCATTAAGGAGCTAGGTACTCTGATCCCCAAGTCAA  1021

Query  686  ATGATCCAGACATGCGCTGGAACAAGGGAACCATCTTAAAAGCATCCGTGGACTATATCCGAAAGTTGCAACGA  759
            ||||||||||||||||.|||||||||||||||||..|.||.||.||.||||||||.|||||.|||||||||||.
Sbjct 1022  ATGATCCAGACATGCGGTGGAACAAGGGAACCATTCTCAAGGCCTCTGTGGACTACATCCGGAAGTTGCAACGG  1095

Query  760  GAACAGCAACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAG  833
            |||||||||||.||.||.||.||||||||||||||||||||.||||||||.||.||||||||..||.|||||||
Sbjct 1096  GAACAGCAACGAGCTAAGGACCTTGAAAACCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCTGCTGCTCAG  1169

Query  834  AATACAGGAACTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAG  907
            |.|||||||.||.||.|||||||||.||||.|||||||||||||||||.||||||||.|||||||||||.||.|
Sbjct 1170  AGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTG  1243

Query  908  ATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCATCATGCA  981
            ||.||||||||||||||||||||||||||||.||||||||||||||||||||.||.||..|.|||||.||.|||
Sbjct 1244  ATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCA  1317

Query  982  GACCTAACCTGTACAACAACTCTCGATCTCACGGATGGCACCATCACCTTCAACAACAACCTCGGAAC--TG--  1051
            |||||.||.|||||.||||||||.|||||||||||.||.|||||||||||.|.||||||||||||.||  ||  
Sbjct 1318  GACCTGACATGTACGACAACTCTGGATCTCACGGACGGTACCATCACCTTTACCAACAACCTCGGCACCATGCC  1391

Query 1052  GGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAGACATCCTGATGGACGAC  1125
            |||  |||  ||.||..|||||.||..||||||..||.|||||.|||||..||||||||||||||||||||||.
Sbjct 1392  GGA--GAG--CAGCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACGAT  1461

Query 1126  ACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCG  1199
            .||||.||.||.||.||.|||||.||.|||||.||.||.||||||||.||.||||||||.||||||||||||||
Sbjct 1462  GCCCTCTCACCTGTTGGAGTCACCGACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCG  1535

Query 1200  GAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGT  1239
            ||||||||||||||||...|||||.||||||||..|.|||
Sbjct 1536  GAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGT  1575

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