Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01017
Subject:
XM_006505689.3
Aligned Length:
1546
Identities:
1080
Gaps:
326

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGGCGCTTAGATTTGAGATGCTCATCCCCTGCTCCTTTGAAAGCTTGTGTCTTTCTGCAGAGCATTCTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCTCCAAGCCTCCGTTAAGCTCCTCCACTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGATGCAGGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCC  222

Query    1  ------------------------------------------------------------ATGC---TGGAAAT  11
                                                                        .|||   |||||.|
Sbjct  223  GTGAGTCAGACACCAGCCATAAACGTCAGCGTGCCCACCACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGT  296

Query   12  GCTAGAATATAATCACTATCAGGTGCAGACCCACCTCGAAAACCCCACCAAGTACCACATACAGCAAGCCCAAC  85
            .||               |.||||||||||||||||.||||||||||||||||||||||||||||||||.||..
Sbjct  297  CCT---------------TAAGGTGCAGACCCACCTGGAAAACCCCACCAAGTACCACATACAGCAAGCTCAGA  355

Query   86  GGCAGCAGGTAAAGCAGTACCTTTCTACCACTTTAGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCATGT  159
            ||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||..||||||
Sbjct  356  GGCACCAGGTAAAGCAGTACCTTTCTACCACTTTAGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACCATGT  429

Query  160  CCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATGCT  233
            |||||||||||||||||.||||.|||||||||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct  430  CCAAACCAGCCTGGCGACCATGCCATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCT  503

Query  234  TACGCTTAACTCCAACTGTGAAAAAGAGGGATTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCC  307
            .||.|||||||||||||||||||||||||.|||||||||||||||.|||||.|.||||||||||||.|||||||
Sbjct  504  CACTCTTAACTCCAACTGTGAAAAAGAGGCATTTTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCC  577

Query  308  CAGGCATGAACACACATTCACGAGCGTCCTGTATGCAGATGGATGATGTAATCGATGACATCATTAGCCTAGAA  381
            ||||.||||||||.||.||.||||||||.||.||||||||||||||||||||.|||||||||||.|||||.|||
Sbjct  578  CAGGTATGAACACGCACTCTCGAGCGTCGTGCATGCAGATGGATGATGTAATTGATGACATCATCAGCCTGGAA  651

Query  382  TCAAGTTATAATGAGGAAATCTTGGGCTTGATGGATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCTCGGG  455
            ||||||||||||||.|||||.|||||||||||||||||.||.||||||||||||||||||||.||.|||||.||
Sbjct  652  TCAAGTTATAATGAAGAAATTTTGGGCTTGATGGATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCTCTGG  725

Query  456  AAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCA  529
            |||||||||.||.||.||..|.|||||.||.|||||.||.||||||||.|||||||||||||||||||||||||
Sbjct  726  AAACTTGATCGACCTCTACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCA  799

Query  530  ACCTTCCCAACATAAAAAGGGAGCT------------------CACAGAGTCTGAAGCAAGAGCACTGGCCAAA  585
            |||||||||||||||||||||||||                  ||||||||||||||||||||||.||||.|||
Sbjct  800  ACCTTCCCAACATAAAAAGGGAGCTCACAGCGTGTATTTTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAA  873

Query  586  GAGAGGCAGAAAAAGGACAATCACAACCTGATTGAACGAAGAAGAAGATTTAACATAAATGACCGCATTAAAGA  659
            |||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct  874  GAGAGGCAGAAAAAGGACAATCACAACTTGATTGAACGAAGAAGAAGATTTAACATAAACGACCGCATTAAGGA  947

Query  660  ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGACATGCGCTGGAACAAGGGAACCATCTTAAAAGCATCCG  733
            .|||||||||.||||.||||||||||||||||||||||||||.|||||||||||||||||..|.||.||.||.|
Sbjct  948  GCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGACATGCGGTGGAACAAGGGAACCATTCTCAAGGCCTCTG  1021

Query  734  TGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAG  807
            |||||||.|||||.|||||||||||.|||||||||||.||.||.||.||||||||||||||||||||.||||||
Sbjct 1022  TGGACTACATCCGGAAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTTGAAAACCGACAGAAGAAGCTGGAG  1095

Query  808  CACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT  881
            ||.||.||||||||..||.||||||||.|||||||.||.||.|||||||||.||||.|||||||||||||||||
Sbjct 1096  CATGCGAACCGGCACCTGCTGCTCAGAGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTAT  1169

Query  882  TCCATCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCA  955
            .||||||||.|||||||||||.||.|||.||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1170  CCCATCCACCGGTCTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCA  1243

Query  956  GCCAAGACCTCCTTCAGCATCATGCAGACCTAACCTGTACAACAACTCTCGATCTCACGGATGGCACCATCACC  1029
            ||||.||.||..|.|||||.||.||||||||.||.|||||.||||||||.|||||||||||.||.|||||||||
Sbjct 1244  GCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCACGGACGGTACCATCACC  1317

Query 1030  TTCAACAACAACCTCGGAAC--TG--GGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA  1099
            ||.|.||||||||||||.||  ||  |||  |||  ||.||..|||||.||..||||||..||.|||||.||||
Sbjct 1318  TTTACCAACAACCTCGGCACCATGCCGGA--GAG--CAGCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCA  1387

Query 1100  AACTGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCC  1173
            |..||||||||||||||||||||||..||||.||.||.||.||.|||||.||.|||||.||.||.||||||||.
Sbjct 1388  ACTTGGAAGACATCCTGATGGACGATGCCCTCTCACCTGTTGGAGTCACCGACCCACTGCTGTCATCAGTGTCG  1461

Query 1174  CCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGT  1239
            ||.||||||||.||||||||||||||||||||||||||||||...|||||.||||||||..|.|||
Sbjct 1462  CCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCGTGT  1527

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