Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01017
Subject:
XM_006505691.3
Aligned Length:
1513
Identities:
1080
Gaps:
293

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGTTGTTTGCCACGGGCAGTTCTGCAGAGCATTCTGGGGCCTCCAAGCCTCCGTTAAGCTCCTCCACTAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCAGCAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAAGCTGCAGGCAGCCCAGTTCATGCAACAGAGAGTGGCCGTGAGTCAGACACCAGCCATAAACGTCAGCGTG  222

Query    1  ---------------------------ATGC---TGGAAATGCTAGAATATAATCACTATCAGGTGCAGACCCA  44
                                       .|||   |||||.|.||               |.|||||||||||||
Sbjct  223  CCCACCACCCTTCCCTCTGCCACCCAGGTGCCGATGGAAGTCCT---------------TAAGGTGCAGACCCA  281

Query   45  CCTCGAAAACCCCACCAAGTACCACATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTACCTTTCTACCACTT  118
            |||.||||||||||||||||||||||||||||||||.||..||||.||||||||||||||||||||||||||||
Sbjct  282  CCTGGAAAACCCCACCAAGTACCACATACAGCAAGCTCAGAGGCACCAGGTAAAGCAGTACCTTTCTACCACTT  355

Query  119  TAGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCG  192
            ||||||||||||||||||.||||||||||||||..|||||||||||||||||||||||.||||.|||||||||.
Sbjct  356  TAGCAAATAAACATGCCAGCCAAGTCCTGAGCTCACCATGTCCAAACCAGCCTGGCGACCATGCCATGCCACCA  429

Query  193  GTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGGATT  266
            |||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||||||||||||||.|||
Sbjct  430  GTGCCGGGGAGCAGCGCACCCAACAGCCCTATGGCTATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGCATT  503

Query  267  TTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCAGGCATGAACACACATTCACGAGCGTCCTGTA  340
            ||||||||||||.|||||.|.||||||||||||.|||||||||||.||||||||.||.||.||||||||.||.|
Sbjct  504  TTATAAGTTTGAGGAGCAGAGCAGGGCAGAGAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGTCGTGCA  577

Query  341  TGCAGATGGATGATGTAATCGATGACATCATTAGCCTAGAATCAAGTTATAATGAGGAAATCTTGGGCTTGATG  414
            |||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||.|||||.||||||||||||
Sbjct  578  TGCAGATGGATGATGTAATTGATGACATCATCAGCCTGGAATCAAGTTATAATGAAGAAATTTTGGGCTTGATG  651

Query  415  GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCT  488
            |||||.||.||||||||||||||||||||.||.|||||.|||||||||||.||.||.||..|.|||||.||.||
Sbjct  652  GATCCGGCCTTGCAAATGGCAAATACGTTACCCGTCTCTGGAAACTTGATCGACCTCTACAGCAACCAGGGCCT  725

Query  489  GCCCCCACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT--------  554
            |||.||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  726  GCCACCGCCAGGCCTTACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCTCACAGCGT  799

Query  555  ----------CACAGAGTCTGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAAGGACAATCACAACCTGATT  618
                      ||||||||||||||||||||||.||||.||||||||||||||||||||||||||||||.|||||
Sbjct  800  GTATTTTCCCCACAGAGTCTGAAGCAAGAGCATTGGCTAAAGAGAGGCAGAAAAAGGACAATCACAACTTGATT  873

Query  619  GAACGAAGAAGAAGATTTAACATAAATGACCGCATTAAAGAACTAGGTACTTTGATTCCCAAGTCAAATGATCC  692
            ||||||||||||||||||||||||||.|||||||||||.||.|||||||||.||||.|||||||||||||||||
Sbjct  874  GAACGAAGAAGAAGATTTAACATAAACGACCGCATTAAGGAGCTAGGTACTCTGATCCCCAAGTCAAATGATCC  947

Query  693  AGACATGCGCTGGAACAAGGGAACCATCTTAAAAGCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGC  766
            |||||||||.|||||||||||||||||..|.||.||.||.||||||||.|||||.|||||||||||.|||||||
Sbjct  948  AGACATGCGGTGGAACAAGGGAACCATTCTCAAGGCCTCTGTGGACTACATCCGGAAGTTGCAACGGGAACAGC  1021

Query  767  AACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAG  840
            ||||.||.||.||.||||||||||||||||||||.||||||||.||.||||||||..||.||||||||.|||||
Sbjct 1022  AACGAGCTAAGGACCTTGAAAACCGACAGAAGAAGCTGGAGCATGCGAACCGGCACCTGCTGCTCAGAGTACAG  1095

Query  841  GAACTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAGATTTGGT  914
            ||.||.||.|||||||||.||||.|||||||||||||||||.||||||||.|||||||||||.||.|||.||||
Sbjct 1096  GAGCTGGAGATGCAGGCTAGAGCGCATGGACTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTGATCTGGT  1169

Query  915  GAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCATCATGCAGACCTAA  988
            ||||||||||||||||||||||||.||||||||||||||||||||.||.||..|.|||||.||.||||||||.|
Sbjct 1170  GAATCGGATCATCAAGCAAGAACCAGTTCTTGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGA  1243

Query  989  CCTGTACAACAACTCTCGATCTCACGGATGGCACCATCACCTTCAACAACAACCTCGGAAC--TG--GGACTGA  1058
            |.|||||.||||||||.|||||||||||.||.|||||||||||.|.||||||||||||.||  ||  |||  ||
Sbjct 1244  CATGTACGACAACTCTGGATCTCACGGACGGTACCATCACCTTTACCAACAACCTCGGCACCATGCCGGA--GA  1315

Query 1059  GGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAGACATCCTGATGGACGACACCCTTT  1132
            |  ||.||..|||||.||..||||||..||.|||||.|||||..||||||||||||||||||||||..||||.|
Sbjct 1316  G--CAGCCCGGCCTACAGCATCCCCAGGAAGATGGGCTCCAACTTGGAAGACATCCTGATGGACGATGCCCTCT  1387

Query 1133  CTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGC  1206
            |.||.||.||.|||||.||.|||||.||.||.||||||||.||.||||||||.|||||||||||||||||||||
Sbjct 1388  CACCTGTTGGAGTCACCGACCCACTGCTGTCATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGC  1461

Query 1207  AGTATGAGCATGGAAGAGACGGAGCACACTTGT  1239
            |||||||||...|||||.||||||||..|.|||
Sbjct 1462  AGTATGAGCGCAGAAGAAACGGAGCATGCGTGT  1494

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