Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01017
Subject:
XM_011241244.2
Aligned Length:
1261
Identities:
926
Gaps:
209

Alignment

Query    1  ATGCTGGAAATGCTAGAATATAATCACTATCAGGTGCAGACCCACCTCGAAAACCCCACCAAGTACCACATACA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCAAGCCCAACGGCAGCAGGTAAAGCAGTACCTTTCTACCACTTTAGCAAATAAACATGCCAACCAAGTCCTGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCC  222
                                               ||||||||.|||||||||||||||||||||||||||||.
Sbjct    1  -----------------------------------ATGCCACCAGTGCCGGGGAGCAGCGCACCCAACAGCCCT  39

Query  223  ATGGCTATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGGATTTTATAAGTTTGAAGAGCAAAACAGGGCAGA  296
            |||||||||||.||.|||||||||||||||||||||||||.|||||||||||||||.|||||.|.|||||||||
Sbjct   40  ATGGCTATGCTCACTCTTAACTCCAACTGTGAAAAAGAGGCATTTTATAAGTTTGAGGAGCAGAGCAGGGCAGA  113

Query  297  GAGCGAGTGCCCAGGCATGAACACACATTCACGAGCGTCCTGTATGCAGATGGATGATGTAATCGATGACATCA  370
            |||.|||||||||||.||||||||.||.||.||||||||.||.||||||||||||||||||||.||||||||||
Sbjct  114  GAGTGAGTGCCCAGGTATGAACACGCACTCTCGAGCGTCGTGCATGCAGATGGATGATGTAATTGATGACATCA  187

Query  371  TTAGCCTAGAATCAAGTTATAATGAGGAAATCTTGGGCTTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG  444
            |.|||||.|||||||||||||||||.|||||.|||||||||||||||||.||.||||||||||||||||||||.
Sbjct  188  TCAGCCTGGAATCAAGTTATAATGAAGAAATTTTGGGCTTGATGGATCCGGCCTTGCAAATGGCAAATACGTTA  261

Query  445  CCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGCAACTC  518
            ||.|||||.|||||||||||.||.||.||..|.|||||.||.|||||.||.||||||||.||||||||||||||
Sbjct  262  CCCGTCTCTGGAAACTTGATCGACCTCTACAGCAACCAGGGCCTGCCACCGCCAGGCCTTACCATCAGCAACTC  335

Query  519  CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT------------------CACAGAGTCTGAAGCAAGAG  574
            ||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||
Sbjct  336  CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCTCACAGCGTGTATTTTCCCCACAGAGTCTGAAGCAAGAG  409

Query  575  CACTGGCCAAAGAGAGGCAGAAAAAGGACAATCACAACCTGATTGAACGAAGAAGAAGATTTAACATAAATGAC  648
            ||.||||.||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.|||
Sbjct  410  CATTGGCTAAAGAGAGGCAGAAAAAGGACAATCACAACTTGATTGAACGAAGAAGAAGATTTAACATAAACGAC  483

Query  649  CGCATTAAAGAACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGACATGCGCTGGAACAAGGGAACCATCTT  722
            ||||||||.||.|||||||||.||||.||||||||||||||||||||||||||.|||||||||||||||||..|
Sbjct  484  CGCATTAAGGAGCTAGGTACTCTGATCCCCAAGTCAAATGATCCAGACATGCGGTGGAACAAGGGAACCATTCT  557

Query  723  AAAAGCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTTGAAAACCGACAGA  796
            .||.||.||.||||||||.|||||.|||||||||||.|||||||||||.||.||.||.||||||||||||||||
Sbjct  558  CAAGGCCTCTGTGGACTACATCCGGAAGTTGCAACGGGAACAGCAACGAGCTAAGGACCTTGAAAACCGACAGA  631

Query  797  AGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCAGGCTCGAGCTCATGGA  870
            ||||.||||||||.||.||||||||..||.||||||||.|||||||.||.||.|||||||||.||||.||||||
Sbjct  632  AGAAGCTGGAGCATGCGAACCGGCACCTGCTGCTCAGAGTACAGGAGCTGGAGATGCAGGCTAGAGCGCATGGA  705

Query  871  CTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT  944
            |||||||||||.||||||||.|||||||||||.||.|||.||||||||||||||||||||||||||||.|||||
Sbjct  706  CTTTCCCTTATCCCATCCACCGGTCTCTGCTCGCCTGATCTGGTGAATCGGATCATCAAGCAAGAACCAGTTCT  779

Query  945  TGAGAACTGCAGCCAAGACCTCCTTCAGCATCATGCAGACCTAACCTGTACAACAACTCTCGATCTCACGGATG  1018
            |||||||||||||||.||.||..|.|||||.||.||||||||.||.|||||.||||||||.|||||||||||.|
Sbjct  780  TGAGAACTGCAGCCAGGAACTTGTACAGCACCAGGCAGACCTGACATGTACGACAACTCTGGATCTCACGGACG  853

Query 1019  GCACCATCACCTTCAACAACAACCTCGGAAC--TG--GGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAA  1088
            |.|||||||||||.|.||||||||||||.||  ||  |||  |||  ||.||..|||||.||..||||||..||
Sbjct  854  GTACCATCACCTTTACCAACAACCTCGGCACCATGCCGGA--GAG--CAGCCCGGCCTACAGCATCCCCAGGAA  923

Query 1089  AATGGGATCCAAACTGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT  1162
            .|||||.|||||..||||||||||||||||||||||..||||.||.||.||.||.|||||.||.|||||.||.|
Sbjct  924  GATGGGCTCCAACTTGGAAGACATCCTGATGGACGATGCCCTCTCACCTGTTGGAGTCACCGACCCACTGCTGT  997

Query 1163  CCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACT  1236
            |.||||||||.||.||||||||.||||||||||||||||||||||||||||||...|||||.||||||||..|.
Sbjct  998  CATCAGTGTCGCCAGGAGCTTCAAAAACAAGCAGCCGGAGGAGCAGTATGAGCGCAGAAGAAACGGAGCATGCG  1071

Query 1237  TGT  1239
            |||
Sbjct 1072  TGT  1074

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