Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01087
Subject:
XM_011243670.2
Aligned Length:
1548
Identities:
1107
Gaps:
315

Alignment

Query    1  ATGGCCGGGGCCATCGCTTCCCGCATGAGCTTCAGCTCTCTCAAGAGGAAGCAACCCAAGACGTTCACCGTGAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GATCGTCACCATGGACGCCGAGATGGAGTTCAATTGCGAGGTAAAGAAGCAGATTTTAGATGAAAAGATCTACT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCCCTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAGGCCAAGTATGGTGACTACGACCCCAGTGTT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CACAAGCGGGGATTTTTGGCCCAAGAGGAATTGCTTCCAAAAAGGGTAATAAATCTGTATCAGATGACTCCGGA  296
                                                                           |||||||||||
Sbjct    1  ---------------------------------------------------------------ATGACTCCGGA  11

Query  297  AATGTGGGAGGAGAGAATTACTGCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGGATGAAGCTGAAATGGAAT  370
            |||||||||||||||||||||.||||||||.||.||||||||.|||.|||||||||||||||||||||||||.|
Sbjct   12  AATGTGGGAGGAGAGAATTACGGCTTGGTATGCGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAATGGAGT  85

Query  371  ATCTGAAGATAGCTCAGGACCTGGAGATGTACGGTGTGAACTACTTTGCAATCCGGAATAAAAAGGGCACAGAG  444
            ||.||||||||||||||||||||||||||||.|||||||||||||||.||||||||||||||||||||||||||
Sbjct   86  ATTTGAAGATAGCTCAGGACCTGGAGATGTATGGTGTGAACTACTTTACAATCCGGAATAAAAAGGGCACAGAG  159

Query  445  CTGCTGCTTGGAGTGGATGCCCTGGGGCTTCACATTTATGACCCTGAGAACAGACTGACCCCCAAGATCTCCTT  518
            .|||||||||||||||||||.||.||||||||.||.|||||||||||||||||.||||||||||||||||||||
Sbjct  160  TTGCTGCTTGGAGTGGATGCTCTTGGGCTTCATATCTATGACCCTGAGAACAGGCTGACCCCCAAGATCTCCTT  233

Query  519  CCCGTGGAATGAAATCCGAAACATCTCGTACAGTGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTG  592
            |||.|||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  234  CCCATGGAATGAAATCCGAAACATCTCCTACAGCGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTG  307

Query  593  ATGTCTTCAAGTTTAACTCCTCAAAGCTTCGTGTTAATAAGCTGATTCTCCAGCTATGTATCGGGAACCATGAT  666
            ||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.
Sbjct  308  ATGTCTTCAAATTTAACTCCTCAAAGCTTCGTGTTAATAAGCTGATTCTTCAGCTATGTATTGGGAACCATGAC  381

Query  667  CTATTTATGAGGAGAAGGAAAGCCGATTCTTTGGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAGGAGAAGGC  740
            ||||||||||||.||.|||||||.||.|||||.||||||||||||||||||||||||||||||||.||||||||
Sbjct  382  CTATTTATGAGGCGACGGAAAGCTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAAGAGAAGGC  455

Query  741  TAGAAAGCAGATGGAGCGGCAGCGCCTCGCTCGAGAGAAGCAGATGAGGGAGGAGGCTGAACGCACGAGGGATG  814
            |||||||||||||||..|||||||.||.||||||||||||||||||.||||||||||.||.||.||.||.||||
Sbjct  456  TAGAAAGCAGATGGAAAGGCAGCGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGCCGAGCGTACAAGAGATG  529

Query  815  AGTTGGAGAGGAGGCTGCTGCAGATGAAAGAAGAAGCAACAATGGCCAACGAAGCACTGATGCGGTCTGAGGAG  888
            ||||.|||||||||||.|||||||||||||||||||||||.||||||||.|||||.||||||||.|||||||||
Sbjct  530  AGTTAGAGAGGAGGCTCCTGCAGATGAAAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCGCTCTGAGGAG  603

Query  889  ACAGCTGACCTGTTGGCTGAAAAGGCCCAGATCACCGAGGAGGAGGCAAAACTTCTGGCCCAGAAGGCCGCAGA  962
            ||||||||.|||||||||||||||||.||||||||.|||||||||||.||.|||.||||.||.|||||.|||||
Sbjct  604  ACAGCTGATCTGTTGGCTGAAAAGGCTCAGATCACAGAGGAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGA  677

Query  963  GGCTGAGCAGGAAATGCAGCGCATCAAGGCCACAGCGATTCGCACGGAGGAGGAGAAGCGCCTGATGGAGCAGA  1036
            |||||||||.||.||||||||.|||||||||||.||.|||||.||.||||||||||||||||||||||||||||
Sbjct  678  GGCTGAGCAAGAGATGCAGCGAATCAAGGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCCTGATGGAGCAGA  751

Query 1037  AGGTGCTGGAAGCCGAGGTGCTGGCACTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAAGAGGCAGATCAG  1110
            ||||||||||.||.||.|||||||||.||||||||||||||||||||||||||||||||||.|||||.||||||
Sbjct  752  AGGTGCTGGAGGCTGAAGTGCTGGCATTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAG  825

Query 1111  CTGAAGCAGGACCTGCAGGAAGCACGCGAGGCGGAGCGAAGAGCCAAGCAGAAGCTCCTGGAGATTGCCACCAA  1184
            .|.|||||.|||.||||.|||||..|.||.||.||||||||||||||||||||||||.|.||.||.||||||||
Sbjct  826  TTAAAGCAAGACTTGCAAGAAGCCAGAGAAGCAGAGCGAAGAGCCAAGCAGAAGCTCTTAGAAATCGCCACCAA  899

Query 1185  GCCCACGTACCCGCCCATGAACCCAATTCCAGCACCGTTGCCTCCTGACATACCAAGCTTCAACCTCATTGGTG  1258
            ||||||.||.||.||||||||||||||||||.||||..||||||||||||||||.||||||.||.|.||||.||
Sbjct  900  GCCCACCTATCCACCCATGAACCCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTG  973

Query 1259  ACAGCCTGTCTTTCGACTTCAAAGATACTGACATGAAGCGGCTTTCCATGGAGATAGAGAAAGAAAAAGTGGAA  1332
            |||||.||||.||.||||||||.|||||.|||||||||||.||||||||||||||||||||||||||||||||.
Sbjct  974  ACAGCTTGTCATTTGACTTCAAGGATACGGACATGAAGCGACTTTCCATGGAGATAGAGAAAGAAAAAGTGGAG  1047

Query 1333  TACATGGAAAAGAGCAAGCATCTGCAGGAGCAGCTCAATGAACTCAAGACAGAAATCGAGGCCTTGAAACTGAA  1406
            ||||||||.|||||||||||.|||||||||||||||||.||.||||||||.||.|||||||||||||||||.||
Sbjct 1048  TACATGGAGAAGAGCAAGCACCTGCAGGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAA  1121

Query 1407  AGAGAGGGAGACAGCTCTGGATATTCTGCACAATGAGAACTCCGACAGGGGTGG---CAGCAGCAAGCACAATA  1477
            ||||.|||||||.||..||||..|.||.||||..||||.|||.|||||.||.||   ||||||||||||.||||
Sbjct 1122  AGAGCGGGAGACGGCCTTGGACGTCCTACACAGCGAGAGCTCAGACAGAGGCGGCCCCAGCAGCAAGCATAATA  1195

Query 1478  CCATTAAAAAGCCTCAAG---CCC-----------AAGGCAGAAGACCTA----------TCTGCATT  1521
            ||||||||||| ||| ||   |||           ||..|.||||.||||          .||||.| 
Sbjct 1196  CCATTAAAAAG-CTC-AGTTTCCCCGTTGTTCTGAAATCCGGAAGTCCTACCCTAAGAAGCCTGCTT-  1260

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