Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01087
Subject:
XM_017314334.1
Aligned Length:
1674
Identities:
1359
Gaps:
162

Alignment

Query    1  ATGGCCGGGGCCATCGCTTCCCGCATGAGCTTCAGCTCTCTCAAGAGGAAGCAACCCAAGACGTTCACCGTGAG  74
            ||||||||.|||||||||||.|||||||||||||||||.||||||||||||||.||||||||.|||||.|||.|
Sbjct    1  ATGGCCGGAGCCATCGCTTCTCGCATGAGCTTCAGCTCACTCAAGAGGAAGCAGCCCAAGACATTCACGGTGCG  74

Query   75  GATCGTCACCATGGACGCCGAGATGGAGTTCAATTGCG------------------------------------  112
            |||||||||||||||||||||||||||||||||.||||                                    
Sbjct   75  GATCGTCACCATGGACGCCGAGATGGAGTTCAACTGCGAGATGAAATGGAAGGGGAAGGACCTGTTTGATTTGG  148

Query  113  --------------------------------------------------------------------------  112
                                                                                      
Sbjct  149  TGTGCCGGACACTGGGGCTTCGGGAAACCTGGTTCTTTGGACTGCAGTATACAATCAAGGACACGGTGGCCTGG  222

Query  113  ----------------AGGTAAAGAAGCAGATTTTAGATGAAAAGATCTACTGCCCTCCTGAGGCTTCTGTGCT  170
                            ||||.||||||||||||||.|||||||||.|||||||||||||.|||||.||.|||||
Sbjct  223  CTCAAAATGGACAAGAAGGTGAAGAAGCAGATTTTGGATGAAAAGGTCTACTGCCCTCCCGAGGCGTCCGTGCT  296

Query  171  CCTGGCTTCTTACGCCGTCCAGGCCAAGTATGGTGACTACGACCCCAGTGTTCACAAGCGGGGATTTTTGGCCC  244
            |.||||.||.||.||.|||||||||||||||||.|||||.||||||..|||.|||||||||||||||||.||||
Sbjct  297  CTTGGCGTCATATGCTGTCCAGGCCAAGTATGGCGACTATGACCCCTCTGTGCACAAGCGGGGATTTTTAGCCC  370

Query  245  AAGAGGAATTGCTTCCAAAAAGGGTAATAAATCTGTATCAGATGACTCCGGAAATGTGGGAGGAGAGAATTACT  318
            |||||||||||||.||.||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.
Sbjct  371  AAGAGGAATTGCTCCCGAAAAGGGTGATAAATCTCTATCAGATGACTCCGGAAATGTGGGAGGAGAGAATTACG  444

Query  319  GCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGGATGAAGCTGAAATGGAATATCTGAAGATAGCTCAGGACCT  392
            ||||||||.||.||||||||.|||.|||||||||||||||||||||||||.|||.|||||||||||||||||||
Sbjct  445  GCTTGGTATGCGGAGCACCGGGGCAGAGCCAGGGATGAAGCTGAAATGGAGTATTTGAAGATAGCTCAGGACCT  518

Query  393  GGAGATGTACGGTGTGAACTACTTTGCAATCCGGAATAAAAAGGGCACAGAGCTGCTGCTTGGAGTGGATGCCC  466
            |||||||||.|||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||.|
Sbjct  519  GGAGATGTATGGTGTGAACTACTTTACAATCCGGAATAAAAAGGGCACAGAGTTGCTGCTTGGAGTGGATGCTC  592

Query  467  TGGGGCTTCACATTTATGACCCTGAGAACAGACTGACCCCCAAGATCTCCTTCCCGTGGAATGAAATCCGAAAC  540
            |.||||||||.||.|||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||
Sbjct  593  TTGGGCTTCATATCTATGACCCTGAGAACAGGCTGACCCCCAAGATCTCCTTCCCATGGAATGAAATCCGAAAC  666

Query  541  ATCTCGTACAGTGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTGATGTCTTCAAGTTTAACTCCTC  614
            |||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  667  ATCTCCTACAGCGACAAGGAGTTTACTATTAAACCACTGGATAAGAAAATTGATGTCTTCAAATTTAACTCCTC  740

Query  615  AAAGCTTCGTGTTAATAAGCTGATTCTCCAGCTATGTATCGGGAACCATGATCTATTTATGAGGAGAAGGAAAG  688
            |||||||||||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||.||.||||||
Sbjct  741  AAAGCTTCGTGTTAATAAGCTGATTCTTCAGCTATGTATTGGGAACCATGACCTATTTATGAGGCGACGGAAAG  814

Query  689  CCGATTCTTTGGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAGGAGAAGGCTAGAAAGCAGATGGAGCGGCAG  762
            |.||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||..|||||
Sbjct  815  CTGACTCTTTAGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAAGAGAAGGCTAGAAAGCAGATGGAAAGGCAG  888

Query  763  CGCCTCGCTCGAGAGAAGCAGATGAGGGAGGAGGCTGAACGCACGAGGGATGAGTTGGAGAGGAGGCTGCTGCA  836
            ||.||.||||||||||||||||||.||||||||||.||.||.||.||.||||||||.|||||||||||.|||||
Sbjct  889  CGGCTGGCTCGAGAGAAGCAGATGCGGGAGGAGGCCGAGCGTACAAGAGATGAGTTAGAGAGGAGGCTCCTGCA  962

Query  837  GATGAAAGAAGAAGCAACAATGGCCAACGAAGCACTGATGCGGTCTGAGGAGACAGCTGACCTGTTGGCTGAAA  910
            ||||||||||||||||||.||||||||.|||||.||||||||.|||||||||||||||||.|||||||||||||
Sbjct  963  GATGAAAGAAGAAGCAACGATGGCCAATGAAGCTCTGATGCGCTCTGAGGAGACAGCTGATCTGTTGGCTGAAA  1036

Query  911  AGGCCCAGATCACCGAGGAGGAGGCAAAACTTCTGGCCCAGAAGGCCGCAGAGGCTGAGCAGGAAATGCAGCGC  984
            ||||.||||||||.|||||||||||.||.|||.||||.||.|||||.||||||||||||||.||.||||||||.
Sbjct 1037  AGGCTCAGATCACAGAGGAGGAGGCCAAGCTTTTGGCACAAAAGGCTGCAGAGGCTGAGCAAGAGATGCAGCGA  1110

Query  985  ATCAAGGCCACAGCGATTCGCACGGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAAGCCGAGGTGCT  1058
            |||||||||||.||.|||||.||.||||||||||||||||||||||||||||||||||||||.||.||.|||||
Sbjct 1111  ATCAAGGCCACGGCCATTCGGACAGAGGAGGAGAAGCGCCTGATGGAGCAGAAGGTGCTGGAGGCTGAAGTGCT  1184

Query 1059  GGCACTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAAGAGGCAGATCAGCTGAAGCAGGACCTGCAGGAAG  1132
            ||||.||||||||||||||||||||||||||||||||||.|||||.||||||.|.|||||.|||.||||.||||
Sbjct 1185  GGCATTGAAGATGGCTGAGGAGTCAGAGAGGAGGGCCAAGGAGGCTGATCAGTTAAAGCAAGACTTGCAAGAAG  1258

Query 1133  CACGCGAGGCGGAGCGAAGAGCCAAGCAGAAGCTCCTGGAGATTGCCACCAAGCCCACGTACCCGCCCATGAAC  1206
            |..|.||.||.||||||||||||||||||||||||.|.||.||.||||||||||||||.||.||.|||||||||
Sbjct 1259  CCAGAGAAGCAGAGCGAAGAGCCAAGCAGAAGCTCTTAGAAATCGCCACCAAGCCCACCTATCCACCCATGAAC  1332

Query 1207  CCAATTCCAGCACCGTTGCCTCCTGACATACCAAGCTTCAACCTCATTGGTGACAGCCTGTCTTTCGACTTCAA  1280
            |||||||||.||||..||||||||||||||||.||||||.||.|.||||.|||||||.||||.||.||||||||
Sbjct 1333  CCAATTCCACCACCACTGCCTCCTGACATACCGAGCTTCGACATTATTGCTGACAGCTTGTCATTTGACTTCAA  1406

Query 1281  AGATACTGACATGAAGCGGCTTTCCATGGAGATAGAGAAAGAAAAAGTGGAATACATGGAAAAGAGCAAGCATC  1354
            .|||||.|||||||||||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|
Sbjct 1407  GGATACGGACATGAAGCGACTTTCCATGGAGATAGAGAAAGAAAAAGTGGAGTACATGGAGAAGAGCAAGCACC  1480

Query 1355  TGCAGGAGCAGCTCAATGAACTCAAGACAGAAATCGAGGCCTTGAAACTGAAAGAGAGGGAGACAGCTCTGGAT  1428
            ||||||||||||||||.||.||||||||.||.|||||||||||||||||.||||||.|||||||.||..||||.
Sbjct 1481  TGCAGGAGCAGCTCAACGAGCTCAAGACGGAGATCGAGGCCTTGAAACTCAAAGAGCGGGAGACGGCCTTGGAC  1554

Query 1429  ATTCTGCACAATGAGAACTCCGACAGGGGTGG---CAGCAGCAAGCACAATACCATTAAAAAGCCTCA------  1493
            .|.||.||||..||||.|||.|||||.||.||   ||||||||||||.||||||||||||||| ||||      
Sbjct 1555  GTCCTACACAGCGAGAGCTCAGACAGAGGCGGCCCCAGCAGCAAGCATAATACCATTAAAAAG-CTCACTCTGC  1627

Query 1494  --AGC-CCAAGGC---------------AGAAGACCTATCTGCATT  1521
              ||| |||||.|               .|||||.||.        
Sbjct 1628  AGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAGAACTC--------  1665

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