Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01600
Subject:
XM_006499070.1
Aligned Length:
2127
Identities:
1902
Gaps:
3

Alignment

Query    1  ATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTGAAAGGTTCCATGAATGATGGTCGACTGAGGTT  74
            ||||||||||||.||||||||||||||.|||..||||||||||||||.||||||||||||||..|.||..|.||
Sbjct    1  ATGGCAGAGACATTGGAGTTCAACGACATCTTCCAGGAGGTGAAAGGGTCCATGAATGATGGGAGGCTTCGATT  74

Query   75  GAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACATCCAGGCTGGGGAGTTAACAG  148
            ||||||||||||.||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||.||||
Sbjct   75  GAGCCGTCAGGGTATCATCTTTAAGAACAGCAAGACGGGCAAAGTGGACAACATCCAGGCTGGGGAGTTGACAG  148

Query  149  AAGGTATCTGGCGCCGTGTTGCTCTGGGCCATGGACTTAAACTGCTTACAAAGAATGGCCATGTCTACAAGTAT  222
            ||||.||||||||.||.||.||..|.||||||||.|||||||||||.|||||||||||.||||||||||||||.
Sbjct  149  AAGGCATCTGGCGTCGGGTAGCATTAGGCCATGGGCTTAAACTGCTCACAAAGAATGGGCATGTCTACAAGTAC  222

Query  223  GATGGCTTCCGAGAATCGGAGTTTGAGAAACTCTCTGATTTCTTCAAAACTCACTATCGCCTTGAGCTAATGGA  296
            |||||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  223  GATGGCTTCCGCGAATCGGAGTTTGAGAAACTCTCTGACTTCTTCAAAACTCACTATCGCCTTGAGCTAATGGA  296

Query  297  GAAGGACCTTTGTGTGAAGGGCTGGAACTGGGGGACAGTGAAATTTGGTGGGCAGCTGCTTTCCTTTGACATTG  370
            ||||||.||.||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.||||||||||
Sbjct  297  GAAGGATCTGTGTGTGAAGGGCTGGAACTGGGGGACAGTGAAGTTTGGAGGACAGCTGCTTTCTTTTGACATTG  370

Query  371  GTGACCAGCCAGTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTG  444
            ||||.||.||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct  371  GTGATCAACCAGTCTTTGAGATACCCCTAAGCAATGTGTCCCAGTGTACCACAGGCAAGAATGAGGTGACCCTG  444

Query  445  GAATTCCACCAAAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGA  518
            |||||||||||.||.||.||.||.||.||.|||||||||||||||||||||||.||.||.|||||.|||||.||
Sbjct  445  GAATTCCACCAGAATGACGATGCTGAAGTATCTCTCATGGAGGTGCGCTTCTATGTTCCTCCCACGCAGGAAGA  518

Query  519  TGGTGTGGACCCTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATG  592
            |||||||||||||||.||||||||||||||||||||..||||||||||.|||||.|||||||||||.|||||.|
Sbjct  519  TGGTGTGGACCCTGTGGAGGCCTTTGCCCAGAATGTTCTGTCAAAGGCAGATGTGATCCAGGCCACCGGAGACG  592

Query  593  CCATCTGCATCTTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTTATGACATTCGGATCTACCCCACCTTT  666
            |||||||||||||||||||||||||||||.||||||||||.|||||.||.||.||.|||||||||||.||||||
Sbjct  593  CCATCTGCATCTTCCGGGAGCTGCAGTGTTTGACTCCTCGCGGTCGATACGATATCCGGATCTACCCTACCTTT  666

Query  667  CTGCACCTGCATGGCAAGACCTTTGACTACAAGATCCCCTACACCACAGTACTGCGTCTGTTTTTGTTACCCCA  740
            ||.||||||||||||||||||||||||||||||||||||||.||.|||||.||.|||||.||..||.||||.||
Sbjct  667  CTACACCTGCATGGCAAGACCTTTGACTACAAGATCCCCTATACTACAGTTCTCCGTCTCTTCCTGCTACCACA  740

Query  741  CAAGGACCAGCGCCAGATGTTCTTTGTGATCAGCCTGGATCCCCCAATCAAGCAAGGCCAAACTCGCTACCACT  814
            ||||||.|||.|.|||||||||||||||||||||.|||||||.||.||||||||.|||||||||||.|||||||
Sbjct  741  CAAGGATCAGAGACAGATGTTCTTTGTGATCAGCTTGGATCCTCCCATCAAGCAGGGCCAAACTCGTTACCACT  814

Query  815  TCCTGATCCTCCTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATGAACGAGGAAGAAGTGGAGAAG  888
            |||||||||||||||||||||||||.||||||||.||.||||||||.||||||||.|||||||||||.||.|||
Sbjct  815  TCCTGATCCTCCTCTTCTCCAAGGATGAGGACATCTCCTTGACTCTCAACATGAATGAGGAAGAAGTAGAAAAG  888

Query  889  CGCTTTGAGGGTCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGTCAGCCGGGTCATGAAAGCACT  962
            |||||||||||.||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||
Sbjct  889  CGCTTTGAGGGGCGACTCACCAAGAACATGTCAGGATCCCTCTATGAAATGGTCAGTCGGGTCATGAAAGCACT  962

Query  963  GGTAAACCGCAAGATCACAGTGCCAGGCAACTTCCAAGGGCACTCAGGGGCCCAGTGCATTACCTGTTCCTACA  1036
            .||.|||||.||.||||||||.|||||||||||||||||||||||||||||||||||.||||||||.|||||.|
Sbjct  963  TGTCAACCGTAAAATCACAGTCCCAGGCAACTTCCAAGGGCACTCAGGGGCCCAGTGTATTACCTGCTCCTATA  1036

Query 1037  AGGCAAGCTCAGGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGC  1110
            ||||.|||||||||||.||.|||||.|||||||||||||||||||||||.||.|||||.|||||||||||||||
Sbjct 1037  AGGCCAGCTCAGGACTCCTGTACCCACTGGAGCGGGGCTTCATCTACGTGCATAAGCCCCCTGTGCACATCCGC  1110

Query 1111  TTCGATGAGATCTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTCCTTTGACTTTGAAATTGAGAC  1184
            ||.|||||||||||.||||||||||||||.|||||.|||||.||.|||||||||||.||||||||.||||||||
Sbjct 1111  TTTGATGAGATCTCTTTTGTCAACTTTGCCCGTGGCACCACGACCACTCGTTCCTTCGACTTTGAGATTGAGAC  1184

Query 1185  CAAGCAGGGCACTCAGTATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGGAAACTGTTTGATTTTGTCAACG  1258
            ||||||.|||||||||||||||||||||||||||||.|||||||||||.||.||.||.||.|||||||||||.|
Sbjct 1185  CAAGCAAGGCACTCAGTATACCTTCAGCAGCATTGAAAGGGAGGAGTATGGAAAGCTTTTCGATTTTGTCAATG  1258

Query 1259  CGAAAAAGCTCAACATCAAAAACCGAGGATTGAAAGAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCT  1332
            |||||||||||||||||||.|||.|||||.|||||||||||||.||||||.||||.||.||.||||||||||||
Sbjct 1259  CGAAAAAGCTCAACATCAAGAACAGAGGACTGAAAGAGGGCATTAACCCAGGCTATGACGATTATGCTGACTCT  1332

Query 1333  GATGAGGACCAGCATGATGCCTACTTGGAGAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGAATGCCAATGA  1406
            |||||.|||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1333  GATGAAGACCAGCATGATGCCTATTTGGAGAGGATGAAGGAGGAGGGCAAGATCCGGGAGGAGAATGCCAATGA  1406

Query 1407  CAGCAGCGATGACTCAGGAGAAGAAACCGATGAGTCATTCAACCCAGGTGAAGAGGAGGAAGATGTGGCAGAGG  1480
            |||||||||.||||||||||||||.||.||||||||.|||||.||.||||||||.||.||||||||||||||||
Sbjct 1407  CAGCAGCGACGACTCAGGAGAAGAGACTGATGAGTCCTTCAATCCTGGTGAAGAAGAAGAAGATGTGGCAGAGG  1480

Query 1481  AGTTTGACAGCAACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAA  1554
            |||||||||||||.||||||||||||||||||||.||||||||||||||||||||.||.||||||||.|||.||
Sbjct 1481  AGTTTGACAGCAATGCCTCTGCCAGCTCCTCCAGCAATGAGGGTGACAGTGACCGTGAAGAGAAGAAACGGGAA  1554

Query 1555  CAGCTCAAAAAGGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAAGAAGGGCAAAGA  1628
            ||||||||||.|||.||||||||||||||.||.||||||||||.||||.||...||||..||||||||.|||||
Sbjct 1555  CAGCTCAAAAGGGCTAAGATGGCCAAGGATCGAAAGAGCCGCAGGAAGTCTTCAGAGGCAAAGAAGGGTAAAGA  1628

Query 1629  CCCCAATGCCCCCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAG  1702
            .||.||.|||||.||||||||.||||||||.||||||||||||||.|||||.|||||.||||||||||||||.|
Sbjct 1629  TCCAAACGCCCCAAAGAGGCCTATGTCTGCGTACATGCTGTGGCTTAATGCAAGCCGCGAGAAGATCAAGTCGG  1702

Query 1703  ACCATCCTGGCATCAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGATCTGGAAGGGAATGTCCAAAGAGAAG  1776
            |.||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1703  ATCATCCTGGCATCAGTATCACAGATCTTTCCAAGAAGGCAGGGGAGATCTGGAAGGGAATGTCCAAAGAGAAG  1776

Query 1777  AAAGAGGAGTGGGATCGCAAGGCTGAGGATGCCAGGAGGGACTATGAAAAAGCCATGAAAGAATATGAAGGGGG  1850
            ||.|||||||||||.|||||||||||||||||.||||||||.|||||.||||||||||||||.||||||||.||
Sbjct 1777  AAGGAGGAGTGGGACCGCAAGGCTGAGGATGCTAGGAGGGAGTATGAGAAAGCCATGAAAGAGTATGAAGGAGG  1850

Query 1851  CCGAGGCGAGTCTTCTAAGAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCA  1924
            ..||||.||.||.|||||.|||||||||||.||||||||.|||||||||||.|.||||||||||||.||.||||
Sbjct 1851  AAGAGGGGACTCATCTAAAAGGGACAAGTCTAAGAAGAAAAAGAAAGTAAAAGCAAAGATGGAAAAAAAGTCCA  1924

Query 1925  CGCCCTCTAGGGGCTCATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTG  1998
            |.||.||..|||||||.|||||||||||.||.||.||||||.|.||.||.||||||||||||||||||||||||
Sbjct 1925  CTCCTTCCCGGGGCTCGTCATCCAAGTCTTCATCCAGGCAGTTGAGTGACAGCTTCAAGAGCAAAGAGTTTGTG  1998

Query 1999  TCTAGTGATGAGAGCTCTTCGGGAGAGAACAAGAGCAAAAAGAAGAGGAGGAGGAGCGAGGACTCTGAAGAAGA  2072
            ||.|||||||||||||||||.||.|||||||||||||||||||||||||||.||||||||||||||   |||||
Sbjct 1999  TCCAGTGATGAGAGCTCTTCAGGCGAGAACAAGAGCAAAAAGAAGAGGAGGCGGAGCGAGGACTCT---GAAGA  2069

Query 2073  AGAACTAGCCAGTACTCCCCCCAGCTCAGAGGACTCAGCGTCAGGATCCGATGAG  2127
            .||.|||||||||||.||.||.||||||||||||||.||.||.|||||.|||||.
Sbjct 2070  GGAGCTAGCCAGTACCCCTCCAAGCTCAGAGGACTCTGCCTCGGGATCTGATGAA  2124

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