Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01600
Subject:
XM_024448665.1
Aligned Length:
2412
Identities:
2127
Gaps:
285

Alignment

Query    1  ATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTGAAAGGTTCCATGAATGATGGTCGACTGAGGTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCAGAGACACTGGAGTTCAACGACGTCTATCAGGAGGTGAAAGGTTCCATGAATGATGGTCGACTGAGGTT  74

Query   75  GAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACATCCAGGCTGGGGAGTTAACAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAGCCGTCAGGGCATCATCTTCAAGAATAGCAAGACAGGCAAAGTGGACAACATCCAGGCTGGGGAGTTAACAG  148

Query  149  AAGGTATCTGGCGCCGTGTTGCTCTGGGCCATGGACTTAAACTGCTTACAAAGAATGGCCATGTCTACAAGTAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAGGTATCTGGCGCCGTGTTGCTCTGGGCCATGGACTTAAACTGCTTACAAAGAATGGCCATGTCTACAAGTAT  222

Query  223  GATGGCTTCCGAGAATCGGAGTTTGAGAAACTCTCTGATTTCTTCAAAACTCACTATCGCCTTGAGCTAATGGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATGGCTTCCGAGAATCGGAGTTTGAGAAACTCTCTGATTTCTTCAAAACTCACTATCGCCTTGAGCTAATGGA  296

Query  297  GAAGGACCTTTGTGTGAAGGGCTGGAACTGGGGGACAGTGAAATTTGGT-------------------------  345
            |||||||||||||||||||||||||||||||||||||||||||||||||                         
Sbjct  297  GAAGGACCTTTGTGTGAAGGGCTGGAACTGGGGGACAGTGAAATTTGGTGGTGAGTCCTGGGGAAGACTGAGGT  370

Query  346  --------------------------------------------------------------------------  345
                                                                                      
Sbjct  371  TTGGGGAGGAAGATAGGGTGAAGGGTTTCAGCCTTTTACTTGTTTTGCTCTTTTCCCTCTGCCACTGTCTCTGG  444

Query  346  --------------------------------------------------------------------------  345
                                                                                      
Sbjct  445  TTTCCTATCTATTTGCATGTTCATCATGTGTTTATTGAGTACCTACAGTATACTGCCTGGGGTTGGGGTTATAG  518

Query  346  --------------------------------------------------------------------------  345
                                                                                      
Sbjct  519  TCTAAACAGACTAACCGCAGTATCCTGTCTCTGTGGAACTCAGTTTGGTGGGAATATTGCTTATGCAGACTTAA  592

Query  346  --------------------------------------GGGCAGCTGCTTTCCTTTGACATTGGTGACCAGCCA  381
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct  593  GGGGAGGAGCTTGTGGCTGGATAAGCCCTTTCCTCACAGGGCAGCTGCTTTCCTTTGACATTGGTGACCAGCCA  666

Query  382  GTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATTCCACCA  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTCTTTGAGATACCCCTCAGCAATGTGTCCCAGTGCACCACAGGCAAGAATGAGGTGACACTGGAATTCCACCA  740

Query  456  AAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGGACC  529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAACGATGACGCAGAGGTGTCTCTCATGGAGGTGCGCTTCTACGTCCCACCCACCCAGGAGGATGGTGTGGACC  814

Query  530  CTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATC  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTGTTGAGGCCTTTGCCCAGAATGTGTTGTCAAAGGCGGATGTAATCCAGGCCACGGGAGATGCCATCTGCATC  888

Query  604  TTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTTATGACATTCGGATCTACCCCACCTTTCTGCACCTGCA  677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTCCGGGAGCTGCAGTGTCTGACTCCTCGTGGTCGTTATGACATTCGGATCTACCCCACCTTTCTGCACCTGCA  962

Query  678  TGGCAAGACCTTTGACTACAAGATCCCCTACACCACAGTACTGCGTCTGTTTTTGTTACCCCACAAGGACCAGC  751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGGCAAGACCTTTGACTACAAGATCCCCTACACCACAGTACTGCGTCTGTTTTTGTTACCCCACAAGGACCAGC  1036

Query  752  GCCAGATGTTCTTTGTGATCAGCCTGGATCCCCCAATCAAGCAAGGCCAAACTCGCTACCACTTCCTGATCCTC  825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCCAGATGTTCTTTGTGATCAGCCTGGATCCCCCAATCAAGCAAGGCCAAACTCGCTACCACTTCCTGATCCTC  1110

Query  826  CTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATGAACGAGGAAGAAGTGGAGAAGCGCTTTGAGGG  899
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CTCTTCTCCAAGGACGAGGACATTTCGTTGACTCTGAACATGAACGAGGAAGAAGTGGAGAAGCGCTTTGAGGG  1184

Query  900  TCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGTCAGCCGGGTCATGAAAGCACTGGTAAACCGCA  973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCGGCTCACCAAGAACATGTCAGGATCCCTCTATGAGATGGTCAGCCGGGTCATGAAAGCACTGGTAAACCGCA  1258

Query  974  AGATCACAGTGCCAGGCAACTTCCAAGGGCACTCAGGGGCCCAGTGCATTACCTGTTCCTACAAGGCAAGCTCA  1047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGATCACAGTGCCAGGCAACTTCCAAGGGCACTCAGGGGCCCAGTGCATTACCTGTTCCTACAAGGCAAGCTCA  1332

Query 1048  GGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGCTTCGATGAGAT  1121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGACTGCTCTACCCGCTGGAGCGGGGCTTCATCTACGTCCACAAGCCACCTGTGCACATCCGCTTCGATGAGAT  1406

Query 1122  CTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTCCTTTGACTTTGAAATTGAGACCAAGCAGGGCA  1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CTCCTTTGTCAACTTTGCTCGTGGTACCACTACTACTCGTTCCTTTGACTTTGAAATTGAGACCAAGCAGGGCA  1480

Query 1196  CTCAGTATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGGAAACTGTTTGATTTTGTCAACGCGAAAAAGCTC  1269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTCAGTATACCTTCAGCAGCATTGAGAGGGAGGAGTACGGGAAACTGTTTGATTTTGTCAACGCGAAAAAGCTC  1554

Query 1270  AACATCAAAAACCGAGGATTGAAAGAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCA  1343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AACATCAAAAACCGAGGATTGAAAGAGGGCATGAACCCAAGCTACGATGAATATGCTGACTCTGATGAGGACCA  1628

Query 1344  GCATGATGCCTACTTGGAGAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGAATGCCAATGACAGCAGCGATG  1417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCATGATGCCTACTTGGAGAGGATGAAGGAGGAAGGCAAGATCCGGGAGGAGAATGCCAATGACAGCAGCGATG  1702

Query 1418  ACTCAGGAGAAGAAACCGATGAGTCATTCAACCCAGGTGAAGAGGAGGAAGATGTGGCAGAGGAGTTTGACAGC  1491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACTCAGGAGAAGAAACCGATGAGTCATTCAACCCAGGTGAAGAGGAGGAAGATGTGGCAGAGGAGTTTGACAGC  1776

Query 1492  AACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAA  1565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AACGCCTCTGCCAGCTCCTCCAGTAATGAGGGTGACAGTGACCGGGATGAGAAGAAGCGGAAACAGCTCAAAAA  1850

Query 1566  GGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAAGAAGGGCAAAGACCCCAATGCCC  1639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GGCCAAGATGGCCAAGGACCGCAAGAGCCGCAAGAAGCCTGTGGAGGTGAAGAAGGGCAAAGACCCCAATGCCC  1924

Query 1640  CCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGC  1713
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CCAAGAGGCCCATGTCTGCATACATGCTGTGGCTCAATGCCAGCCGAGAGAAGATCAAGTCAGACCATCCTGGC  1998

Query 1714  ATCAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGATCTGGAAGGGAATGTCCAAAGAGAAGAAAGAGGAGTG  1787
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  ATCAGCATCACGGATCTTTCCAAGAAGGCAGGCGAGATCTGGAAGGGAATGTCCAAAGAGAAGAAAGAGGAGTG  2072

Query 1788  GGATCGCAAGGCTGAGGATGCCAGGAGGGACTATGAAAAAGCCATGAAAGAATATGAAGGGGGCCGAGGCGAGT  1861
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GGATCGCAAGGCTGAGGATGCCAGGAGGGACTATGAAAAAGCCATGAAAGAATATGAAGGGGGCCGAGGCGAGT  2146

Query 1862  CTTCTAAGAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCACGCCCTCTAGG  1935
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CTTCTAAGAGGGACAAGTCAAAGAAGAAGAAGAAAGTAAAGGTAAAGATGGAAAAGAAATCCACGCCCTCTAGG  2220

Query 1936  GGCTCATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTCTAGTGATGA  2009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GGCTCATCATCCAAGTCGTCCTCAAGGCAGCTAAGCGAGAGCTTCAAGAGCAAAGAGTTTGTGTCTAGTGATGA  2294

Query 2010  GAGCTCTTCGGGAGAGAACAAGAGCAAAAAGAAGAGGAGGAGGAGCGAGGACTCTGAAGAAGAAGAACTAGCCA  2083
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GAGCTCTTCGGGAGAGAACAAGAGCAAAAAGAAGAGGAGGAGGAGCGAGGACTCTGAAGAAGAAGAACTAGCCA  2368

Query 2084  GTACTCCCCCCAGCTCAGAGGACTCAGCGTCAGGATCCGATGAG  2127
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GTACTCCCCCCAGCTCAGAGGACTCAGCGTCAGGATCCGATGAG  2412

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