Nucleotide Global Alignment

Description

Query:
ccsbBroad304_01978
Subject:
NM_032099.1
Aligned Length:
2491
Identities:
2058
Gaps:
119

Alignment

Query    1  ATGGGGAGCGGCGCCGGGGAGCTGGGCCGGGCTGAGAGGCTGCCAGTGCTCTTTCTCTTCCTGCTGTCTTTGTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGAGCGGCGCCGGGGAGCTGGGCCGGGCTGAGAGGCTGCCAGTGCTCTTTCTCTTCCTGCTGTCTTTGTT  74

Query   75  CTGCCCGGCGCTCTGTGAGCAGATCCGCTACAGGATTCCCGAGGAAATGCCCAAGGGCTCCGTAGTGGGGAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTGCCCGGCGCTCTGTGAGCAGATCCGCTACAGGATTCCCGAGGAAATGCCCAAGGGCTCCGTAGTGGGGAACC  148

Query  149  TCGCCACGGACCTGGGGTTCAGCGTCCAGGAGTTACCGACTCGAAAACTGCGCGTCAGTTCGGAGAAGCCTTAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCGCCACGGACCTGGGGTTCAGCGTCCAGGAGTTACCGACTCGAAAACTGCGCGTCAGTTCGGAGAAGCCTTAC  222

Query  223  TTCACCGTGAGCGCAGAGAGCGGGGAGTTGCTTGTGAGCAGCAGGCTAGACAGGGAGGAGATATGCGGGAAGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTCACCGTGAGCGCAGAGAGCGGGGAGTTGCTTGTGAGCAGCAGGCTAGACAGGGAGGAGATATGCGGGAAGAA  296

Query  297  GCCAGCTTGTGCTCTGGAATTTGAGGCTGTTGCTGAAAATCCACTGAACTTTTATCACGTGAATGTGGAGATCG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCAGCTTGTGCTCTGGAATTTGAGGCTGTTGCTGAAAATCCACTGAACTTTTATCACGTGAATGTGGAGATCG  370

Query  371  AGGACATTAATGACCACACGCCAAAATTCACGCAAAATTCCTTTGAGCTGCAAATAAGTGAGTCTGCACAGCCT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGACATTAATGACCACACGCCAAAATTCACGCAAAATTCCTTTGAGCTGCAAATAAGTGAGTCTGCACAGCCT  444

Query  445  GGCACACGATTTATATTAGGATCTGCCCATGATGCGGATATTGG--TAGCAACACACTGCAGAATTACCAACTC  516
            ||||||.||||||||.|||.|...||..|.|||||.||||||||  ||  |||.|.||||||||.||..|||||
Sbjct  445  GGCACAAGATTTATACTAGAAGTAGCAGAAGATGCAGATATTGGCTTA--AACTCTCTGCAGAAGTATAAACTC  516

Query  517  ------AGTCCCAGTGATCATTTCTCACTGATAAATAAAGAGAAATCA-GATGGCAGTAAATACCCTGAGATGG  583
                  |..||.||      |||||||.|.||||.|||.|||||| || |||||.|||||||||||.||..|||
Sbjct  517  TCTCTTAACCCAAG------TTTCTCATTAATAATTAAGGAGAAA-CAGGATGGTAGTAAATACCCGGAACTGG  583

Query  584  TATTGAAGACACCTTTGGACAGAGAAAAGCAGAAATCCTACCA--CTTGACT-TTGACTGCCTTGGACTTTGGA  654
            .|.||.|||.|.|.||.|||.|.|||.|.||||   ..|||||  .||.|.| .||||||||||||||..||||
Sbjct  584  CACTGGAGAAAACCTTAGACCGGGAACAACAGA---GTTACCATCGTTTAGTCCTGACTGCCTTGGACGGTGGA  654

Query  655  GCTCCACCCCTAAGCAGCACTGCAC--AGATACACGTTCTA-GTGACTGATGCCAATGATAATGCTCCAGTGTT  725
            ..|||||||||||||.||||  |||  ||.| |..|.||.| ||.||.||.||||||||||||.|.||.||.||
Sbjct  655  CATCCACCCCTAAGCGGCAC--CACTGAGCT-CCGGATCCAGGTAACCGACGCCAATGATAATCCCCCGGTATT  725

Query  726  CAGTCAAGACGTATACAGGGTGAGCCTTTCAGAAAACGTGTACCCGGGGACCACGGTGCTACAGGTGACTGCCA  799
            ||..|.||||||.|||||.||.||||||...|||||||||...||.||.|||||.|||.|.||.|||.|.||||
Sbjct  726  CAACCGAGACGTGTACAGAGTCAGCCTTCGGGAAAACGTGCCACCAGGCACCACTGTGTTGCAAGTGTCAGCCA  799

Query  800  CGGACCAGGATGAGGGTGTCAATGCCGAGATTACTTTCTCTTTCAGTGAAGCTAGCCAGATCACC---CAA---  867
            |.|||||.||.|||||..||||..|.||.|||||||..||.||        |||  ||||  |||   |||   
Sbjct  800  CTGACCAAGACGAGGGCATCAACTCAGAAATTACTTATTCCTT--------CTA--CAGA--ACCGGGCAAATC  861

Query  868  TTTGACCTGAACTCTAACACCGGGGAAATTACTGTTTTAAATACATTAGATTTTGAAGAAGTCAAAGAATATTC  941
            |||...|||||.||.||.|.|||.||||||||...|..|||.|.|.|.|||||||||||...|||.||||||||
Sbjct  862  TTTAGTCTGAATTCAAAGAGCGGAGAAATTACCACTCAAAAGAAACTGGATTTTGAAGAGACCAAGGAATATTC  935

Query  942  CATAGTTTTGGAAGCAAGGGACGGTGGAGGAATGATTGCGCAATGCACAGTGGAGGTAGAAGTCAT-----AGA  1010
            .||.|||.|.||||..|||||.|||||.|||.||.||||.|||||.|||||.||     ||.|.||     |||
Sbjct  936  AATGGTTGTAGAAGGGAGGGATGGTGGTGGACTGGTTGCACAATGTACAGTTGA-----AATTAATATTCAAGA  1004

Query 1011  TGAAAATGACAACGCCCCAGAAGTGATATTCCAGTCTCTACCCAACCTAATTATGGAGGACGCCGAGCTGGGAA  1084
            ||||||||||||...|||||||||.|.||||||.|||||||...|..|.|||.||||..||||.|.||..||||
Sbjct 1005  TGAAAATGACAATAGCCCAGAAGTTACATTCCATTCTCTACTTGAAATGATTCTGGAAAACGCGGTGCCTGGAA  1078

Query 1085  CACATATTGCTTTGCTCAAAGTCCGTGACAAGGATTCCAGACACAATGGAGAAGTGACTTGTAAATTGGAAGGT  1158
            |||..|||||||||.|||||.|.|.||||.|.|||||..|..|.|||||.||.||.|.||||.||||..||||.
Sbjct 1079  CACTAATTGCTTTGATCAAAATACATGACCAAGATTCTGGGGAAAATGGGGAGGTTAATTGTCAATTACAAGGC  1152

Query 1159  GATGTTCCATTTAAAATATTAACTTCTTCAAGAAACACGTATAAATTAGTGACAGATG----CTGTTCTAGACC  1228
            ||.||.||.|||||.||..|..||||.||.|.|||..|||||||.||.||.|||||||    |    |||||||
Sbjct 1153  GAAGTCCCTTTTAAGATTATCTCTTCATCCAAAAATTCGTATAAGTTGGTAACAGATGGAACC----CTAGACC  1222

Query 1229  GCGAGCAGAATCCAGAGTACAATATAACCGTTACGGCAACAGATCGGGGCAAGCCTCCCCTCTCCTCCAGTTCC  1302
            |.|||||.|..||.|||||||||.|.|||.|.||.||.|||||..||||||||||.||||||||||||||....
Sbjct 1223  GAGAGCAAACCCCGGAGTACAATGTCACCATCACAGCCACAGACAGGGGCAAGCCGCCCCTCTCCTCCAGCATA  1296

Query 1303  AGCATCACCCTGCACATTGGTGATGTAAATGACAACGCTCCGGTTTTCTCA-CAGTCTTCCTATATAGTCCACG  1375
            |||.|||.|||.||.||..|.||.||.||.||.||||||||||||||| || |||.|.|||||..|||||...|
Sbjct 1297  AGCGTCATCCTACATATCAGAGACGTCAACGATAACGCTCCGGTTTTC-CACCAGGCGTCCTACTTAGTCAGTG  1369

Query 1376  TGGCCGAGAACAACCCGCCTGGAGCCTCTATTTCACAAGTCAGGGCTTCTGATCCGGACTTGGGGCCCAACGGC  1449
            |..||||.||||||||.|||||.|||||.||..|.||||||.|.||.||.||.|.||||||||||...||||||
Sbjct 1370  TACCCGAAAACAACCCTCCTGGGGCCTCCATCGCGCAAGTCTGCGCCTCGGACCTGGACTTGGGGTTGAACGGC  1443

Query 1450  CAAGTCTCTTACTGCATCATGGCCAGTGACCTGGAGCAGCGGGAGCTGTCATCCTACGTGTCCATAAGCGCGGA  1523
            ||||||||.||||..|||||||||||.|||||.||||..|.||..|||.|.||.|||||||||||.||||||.|
Sbjct 1444  CAAGTCTCCTACTCTATCATGGCCAGCGACCTAGAGCCTCTGGCACTGGCCTCTTACGTGTCCATGAGCGCGCA  1517

Query 1524  GAGCGGGGTGGTGTTCGCGCAGCGCGCCTTCGACCACGAGCAGCTGCGCGCCTTCGAACTCACACTGCAGGCCC  1597
            .||.||||||||||||||||||||||||||.|||.||||||||||||||.||||||||||||||||.|||||||
Sbjct 1518  AAGTGGGGTGGTGTTCGCGCAGCGCGCCTTTGACTACGAGCAGCTGCGCACCTTCGAACTCACACTACAGGCCC  1591

Query 1598  GCGACCAGGGCTCGCCAGCGCTCAGCGCGAACGTGAGCCTGCGCGTGTTAGTGGACGACCGCAACGACAATGCG  1671
            ||||||||||||||||.|||||||||||.||||||||||||||||||||.||||.||||||.||||||||.||.
Sbjct 1592  GCGACCAGGGCTCGCCTGCGCTCAGCGCAAACGTGAGCCTGCGCGTGTTGGTGGGCGACCGAAACGACAACGCA  1665

Query 1672  CCACGGGTGCTGTACCCCGCGCTGGGTCCCGACGGCTCTGCGCTCTTCGATATGGTGCCGCACGCTGCAGAGCC  1745
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1666  CCGCGGGTGCTGTACCCCGCGCTGGGTCCCGACGGCTCTGCGCTCTTCGATATGGTGCCGCGCGCTGCAGAGCC  1739

Query 1746  TGGCTACTTGGTGACCAAGGTAGTGGCGGTGGACGCAGACTCAGGACACAACGCCTGGCTGTCCTACCACGTGC  1819
            .||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740  CGGCTACCTGGTGACCAAGGTAGTGGCCGTGGACGCAGACTCAGGACACAACGCCTGGCTGTCCTACCACGTGC  1813

Query 1820  TGCAGGCTAGCGAGCCCGGGCTCTTCAGCCTGGGGCTGCGCACGGGCGAAGTGCGCACAGCGCGTGCCTTAGGC  1893
            |||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||.|||
Sbjct 1814  TGCAGGCTAGCGAGCCCGGGCTCTTCAGCCTGGGGCTGCGCACAGGAGAGGTGCGCACAGCGCGTGCCTTGGGC  1887

Query 1894  GACAGGGACGCCGTCCGCCAGCGCCTTCTGGTCGCCGTGCGTGACGGTGGACAGCCACCACTCTCGGCCACTGC  1967
            |||||||||||.|.||||||||||||.|||||.||.||||||||.|||||||||||.||||||||.|||||.||
Sbjct 1888  GACAGGGACGCGGCCCGCCAGCGCCTGCTGGTTGCTGTGCGTGATGGTGGACAGCCGCCACTCTCCGCCACCGC  1961

Query 1968  CACGTTGCACCTGGTCTTCGCCGACAGCTTGCAGGAGGTGCTGCCGGATATCACTGACCGCCCCGACCCCTCTG  2041
            ||||.|||||.|||||||.||.|||||||||||||||||||||||||||||||||||||||||.|..|||||||
Sbjct 1962  CACGCTGCACTTGGTCTTTGCTGACAGCTTGCAGGAGGTGCTGCCGGATATCACTGACCGCCCTGTACCCTCTG  2035

Query 2042  ACCTCCAGGCTGAGCTGCAGTTTTACCTAGTGGTGGCCTTGGCCTTGATCTCAGTGCTCTTCCTCGTGGCCATG  2115
            |||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 2036  ACCCCCAGGCTGAGCTGCAGTTTTACCTAGTGGTGGCCTTGGCCTTGATCTCAGTGCTCTTCCTCCTGGCCGTG  2109

Query 2116  ATTCTGGCCATTGCCTTGCGCCTGCGACGCTCCTCCAGCCCCGCCTCCTGGAGCTGCTTCCAGCCTGGTCTCTG  2189
            |||||||||.|||||||||||||||||||||||||||||||.|||.||||||||||||||||.|||||||||||
Sbjct 2110  ATTCTGGCCGTTGCCTTGCGCCTGCGACGCTCCTCCAGCCCTGCCGCCTGGAGCTGCTTCCAACCTGGTCTCTG  2183

Query 2190  TGTTAAATCCGAATCCGTGGTTCCCCCCAACTACAGCGAGGGGACTTTGCCTTATTCCTACAATCTATGTGTTG  2263
            |||.||.||.|.|.|.||||||||||||||||||||..|||||||||||||||||||||||||.||||||||||
Sbjct 2184  TGTCAAGTCTGGACCTGTGGTTCCCCCCAACTACAGTCAGGGGACTTTGCCTTATTCCTACAACCTATGTGTTG  2257

Query 2264  CACATACAGGAAAGACGGAGTTTAATTTCCTAAAATGTAGTGAGCAGTTGAGTTCAGGACAAGACATACTTTGC  2337
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.
Sbjct 2258  CACATACAGGAAAGACGGAGTTTAATTTCCTAAAATGTAGTGAGCAATTGAGTTCAGGACAAGACATACTTTGT  2331

Query 2338  GGTGATTCATCTGGGGCCTTATTTCCACTTTGTAATTCCAGTGAATTGACTTCCCATC------AGGTGAGTTT  2405
            |||||||||||||||||||||||||||||||||||||||||.||.|.|||||||||||      .|||||||||
Sbjct 2332  GGTGATTCATCTGGGGCCTTATTTCCACTTTGTAATTCCAGCGAGTCGACTTCCCATCCTGAGTTGGTGAGTTT  2405

Query 2406  CCTT---------------------------------------------  2409
            |.||                                             
Sbjct 2406  CATTTATGTCTATTCTTTTTCATTACCCACCCAATTTTCTGTATTTACA  2454

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