Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02208
Subject:
NM_009787.2
Aligned Length:
1937
Identities:
1672
Gaps:
16

Alignment

Query    1  ATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAGCTGCTGGCCGTGGCGGGTGCCGA  74
            ||||.||.|||||||||.|..|||.|..|.||||||||||.||||...|||||||||||.|..|||.|.||||.
Sbjct    1  ATGAAGCTCCGGAAAGCTTGGCTGTTGGTCCTGCTCTTGGCGCTGACACAGCTGCTGGCTGCTGCGAGCGCCGG  74

Query   75  GG--GCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGAAGATGA  146
            .|  ||.|  ||||.|||.||||..|.|.|||||||||||.||||||.|||||||||||.|||||.||.|||||
Sbjct   75  AGATGCAC--ACGAAGATACTTCAGATACAGAAAATGCCACTGAGGAGGAAGAGGAGGAAGAGGAAGAGGATGA  146

Query  147  TGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACTTTGATA  220
            .|||            ||||||||||||||||||||||||||.||.|.||||.|||||||||..||||||||||
Sbjct  147  CGAT------------GACTTGGAAGTTAAGGAAGAAAATGGTGTTTGGGTCTTAAATGATGGGAACTTTGATA  208

Query  221  ATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAGTTTGCT  294
            |.|||||||||||||||||.||||||||.||||||||.|||||.||||||||||||||.|||||||||||||||
Sbjct  209  ACTTTGTGGCTGACAAAGATACAGTGCTACTGGAGTTCTATGCACCATGGTGTGGACACTGCAAGCAGTTTGCT  282

Query  295  CCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAAC  368
            ||.||||||||.||||||||||..|..||.||||||||.||||||||||||.||||.||.||||||||||||||
Sbjct  283  CCAGAATATGAGAAAATTGCCAGTACTTTGAAGGATAATGATCCTCCCATTGCTGTAGCGAAGATCGATGCAAC  356

Query  369  CTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGGGGCAGG  442
            ||||||.||..||||.|||||||..|||||||||||||||||||||||||||||||||||.||||||||.||||
Sbjct  357  CTCAGCATCCATGCTAGCCAGCAAATTTGATGTGAGTGGCTACCCCACCATCAAGATCCTGAAGAAGGGACAGG  430

Query  443  CTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGG  516
            |.||.|||||.||.||||||||.|||||||||||||||||||||||.|||||||||||.||||||||.||.|||
Sbjct  431  CCGTTGACTATGATGGCTCCAGGACCCAGGAAGAAATTGTTGCCAAAGTCAGAGAAGTTTCCCAGCCTGATTGG  504

Query  517  ACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCAT  590
            ||.||||||||.||||||||.|||...|||||.|||||.||||||||.||.|||||.|||.|||||||.||.||
Sbjct  505  ACACCTCCACCTGAAGTCACTCTTTCATTGACTAAAGATAACTTTGACGATGTTGTAAATAATGCAGACATTAT  578

Query  591  TCTGGTGGAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGG  664
            |.||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||.||.|||||||
Sbjct  579  TTTGGTGGAGTTCTATGCCCCGTGGTGTGGACACTGCAAGAAACTTGCCCCTGAGTATGAGAAAGCTGCCAAGG  652

Query  665  AGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGG  738
            |||||||||||||.|||||.|||||||||.|.||.||.||.||||||||||.|.|.|||||||||||.||||||
Sbjct  653  AGCTCAGCAAGCGCTCTCCCCCAATTCCCTTAGCCAAAGTGGACGCCACCGAACAGACAGACCTGGCTAAGAGG  726

Query  739  TTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGA  812
            |||||||||||||||||.||.||..|||||||||||||||||||||||||||.|||||||||.|||||||||||
Sbjct  727  TTTGATGTCTCTGGCTACCCGACTTTGAAAATTTTCCGCAAAGGAAGGCCTTTTGACTACAATGGCCCACGAGA  800

Query  813  AAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGG  886
            .||||||||.||.|||||.||||||||.||||||||.|||||||||||.||||||||.||||||||||||||||
Sbjct  801  GAAATATGGGATTGTTGACTACATGATTGAGCAGTCTGGGCCTCCCTCAAAGGAGATCCTGACCCTGAAGCAGG  874

Query  887  TCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTAC  960
            |||||||||||||||||||||||||.|||||..|||||||.|||.|||||.||||.||..|||||||.||||||
Sbjct  875  TCCAGGAGTTCCTGAAGGATGGAGATGATGTGGTCATCATTGGGCTCTTTCAGGGAGATGGTGACCCGGCCTAC  948

Query  961  CAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGC  1034
            ..|||.||.||||||||.||||||||||||||||||||||||||.||||||||||||||||||.|.||||||||
Sbjct  949  TTGCAGTATCAGGATGCTGCTAACAACCTGAGAGAAGATTACAAGTTTCACCACACTTTCAGCCCTGAAATAGC  1022

Query 1035  AAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCC  1108
            .||||||.||||||||||||.||||.|||||||..|.|..||.||||||||.|||||||||||||||||||||.
Sbjct 1023  CAAGTTCCTGAAAGTCTCCCTGGGGAAGTTGGTGCTGACACACCCTGAGAAGTTCCAGTCCAAGTATGAGCCCA  1096

Query 1109  GGAGCCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTG  1182
            ||..||||.|||||||.||.||||||||.||..|.|..||.|||||.|||||||..||..||||..|.|||.||
Sbjct 1097  GGTTCCACGTGATGGATGTTCAGGGCTCTACAGAAGCATCAGCCATTAAGGACTATGTAGTGAAACATGCCTTG  1170

Query 1183  CCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTACTA  1256
            ||||||||.|||||.||.|||...||.||.|||||||||||.||||.||..||||||||||||||.||.|||||
Sbjct 1171  CCCCTGGTGGGCCATCGTAAGACTTCTAATGATGCTAAGCGGTACAGCAAACGCCCCCTGGTGGTTGTATACTA  1244

Query 1257  CAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGG  1330
            |||||||||||||||||||||||||||||||||.||||||||||||||.|.|||||||||||||||||||||||
Sbjct 1245  CAGTGTGGACTTCAGCTTTGATTACAGAGCTGCTACTCAGTTTTGGCGTAACAAAGTCCTAGAGGTGGCCAAGG  1318

Query 1331  ACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGCTCAGC  1404
            |||||||||||||.|||||.||||||||.|||||.||.||||||||...||||||||||||||||||||||||.
Sbjct 1319  ACTTCCCTGAGTATACCTTCGCCATTGCTGACGAGGAAGACTATGCCACGGAGGTGAAGGACCTGGGGCTCAGT  1392

Query 1405  GAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTT  1478
            ||||||||.||||||||||||||.||||||||.||||||||.|||||||||||.||||||||||||||||||||
Sbjct 1393  GAGAGTGGAGAGGATGTCAATGCAGCCATCCTAGACGAGAGCGGGAAGAAGTTTGCCATGGAGCCAGAGGAGTT  1466

Query 1479  TGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGC  1552
            |||.||.|||||.|||||.||.||||||||.|||||.||||||||||||||.|||||||||||||||||.||||
Sbjct 1467  TGATTCAGACACTCTCCGGGAATTTGTCACAGCTTTTAAAAAAGGAAAACTAAAGCCAGTCATCAAATCACAGC  1540

Query 1553  CAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCC  1626
            ||||.||||||||||||||||||||.||||||||.||||||||||||||||||||..|||||||||||||||||
Sbjct 1541  CAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGATGCCATTGTGATGGACCCC  1614

Query 1627  AAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAG  1700
            ||.||||||||||||||.||.|||||.||.||.|||||.|||||||||||||||||||||||..|.||.|.|||
Sbjct 1615  AAAAAGGACGTCCTCATTGAATTCTATGCACCCTGGTGTGGGCACTGCAAGCAGCTAGAGCCTATCTATACCAG  1688

Query 1701  CCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAACGACGTCCCCA  1774
            |||.|.||||||.|||||||||||.||||.|||||||||||||||||||||.||.||||||||||||.||.|||
Sbjct 1689  CCTAGGCAAGAAATACAAGGGCCAGAAGGACCTGGTCATCGCCAAGATGGATGCTACTGCCAACGACATCACCA  1762

Query 1775  GCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAGTTAAA  1848
            .|||||..||||||||||||||||||||.||||||||.||.||.||||||||||||||||||||||||.|||||
Sbjct 1763  ACGACCAATATAAGGTGGAGGGCTTCCCTACCATCTATTTTGCTCCCAGTGGGGACAAAAAGAACCCAATTAAA  1836

Query 1849  TTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGGAC  1922
            |||||||||||..||||||||||||||||||||||||||||||||||.||||||||||||||...|||||||||
Sbjct 1837  TTTGAGGGTGGCAACAGAGATCTGGAGCATTTGAGCAAGTTTATAGATGAACATGCCACAAAGAGGAGCAGGAC  1910

Query 1923  CAAGGAAGAGCTT  1935
            |||||||||||||
Sbjct 1911  CAAGGAAGAGCTT  1923

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