Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02208
Subject:
NR_163908.1
Aligned Length:
2768
Identities:
1935
Gaps:
833

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGAGGCCGCGCTCCGCCC  74

Query    1  --------ATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAGCTGCTGGCCGTGGCG  66
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAGCTGCTGGCCGTGGCG  148

Query   67  GGTGCCGAGGGCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGA  140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGTGCCGAGGGCCCGGACGAGGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGA  222

Query  141  AGATGATGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACT  214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGATGATGATGAGGAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACT  296

Query  215  TTGATAATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAG  288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTGATAATTTTGTGGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAG  370

Query  289  TTTGCTCCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGA  362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTTGCTCCGGAATATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGA  444

Query  363  TGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGG  436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCAACCTCAGCGTCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGG  518

Query  437  GGCAGGCTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCC  510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGCAGGCTGTAGACTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCC  592

Query  511  GACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGA  584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GACTGGACGCCTCCACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGA  666

Query  585  TATCATTCTGGTGGAGTTTTATGCCCCAT-----GGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAA  653
            |||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TATCATTCTGGTGGAGTTTTATGCCCCATGGTAAGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAA  740

Query  654  GGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACC  727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGCCGCCAAGGAGCTCAGCAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACC  814

Query  728  TGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAAC  801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGCCAAGAGGTTTGATGTCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAAC  888

Query  802  GGCCCACGAGAAAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGAC  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGCCCACGAGAAAAATATGGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGAC  962

Query  876  CCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTG  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTG  1036

Query  950  ACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGC  1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACCCAGCCTACCAGCAATACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGC  1110

Query 1024  ACAGAAATAGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAA  1097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ACAGAAATAGCAAAGTTCTTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAA  1184

Query 1098  GTATGAGCCCCGGAGCCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGA  1171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GTATGAGCCCCGGAGCCACATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGA  1258

Query 1172  AGTACGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTG  1245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AGTACGCCCTGCCCCTGGTTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTG  1332

Query 1246  GTCGTCTACTACAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGA  1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTCGTCTACTACAGTGTGGACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGA  1406

Query 1320  GGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACC  1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGTGGCCAAGGACTTCCCTGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACC  1480

Query 1394  TGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAG  1467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TGGGGCTCAGCGAGAGTGGGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAG  1554

Query 1468  CCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCAT  1541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CCAGAGGAGTTTGACTCTGACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCAT  1628

Query 1542  CAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTG  1615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAAATCCCAGCCAGTGCCCAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTG  1702

Query 1616  TGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCC  1689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGATGGACCCCAAGAAGGACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCC  1776

Query 1690  GTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAA  1763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GTGTACAACAGCCTGGCCAAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAA  1850

Query 1764  CGACGTCCCCAGCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGA  1837
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CGACGTCCCCAGCGACCGCTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGA  1924

Query 1838  ACCCAGTTAAATTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAA  1911
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  ACCCAGTTAAATTTGAGGGTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAA  1998

Query 1912  CTGAGCAGGACCAAGGAAGAGCTT--------------------------------------------------  1935
            ||||||||||||||||||||||||                                                  
Sbjct 1999  CTGAGCAGGACCAAGGAAGAGCTTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGG  2072

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2073  CCCATGGTCGGGGCGTCCACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTTTTTTTTTTAA  2146

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2147  TTTTTTATACTTTGGTGTTTCACTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAGTTTAGTCCAG  2220

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2221  ATTTTTACAGAGGATACATCTATTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACCTTCTAATTTC  2294

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2295  TTTATTTCTCAAAGCAGATAATTCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTAAAATTCCTTT  2368

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2369  TCCAAATCATGTTGATTTTGCTCTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTA  2442

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2443  TGTGTTTCTGATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTC  2516

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2517  AGGCTGGGCATCGCCAGGCGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCA  2590

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2591  GGGTGGGCTCAGCTCCAGGGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAG  2664

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2665  AAAGGACCCTGGACCCAGAGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCAATGGAATAAA  2738

Query 1936  ------------------------------  1935
                                          
Sbjct 2739  ACACGATTAAAAACGTTAAGAACTGCGTTA  2768

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