Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02248
Subject:
NM_172281.2
Aligned Length:
3009
Identities:
2622
Gaps:
12

Alignment

Query    1  ATGTCTGGGC-CAGGCAACAAACGCGCCGCCGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCGTG  73
            ||||||||.| || |||||||.||||||||||||||||||||||||||.|||||.||.||||||.|||..||.|
Sbjct    1  ATGTCTGGCCTCA-GCAACAAGCGCGCCGCCGGCGACGGGGGCTCAGGACCCCCAGAGAAGAAGATGAACCGCG  73

Query   74  AGGAGAAGACCACCACGACTCTTATCGAGCCCATTCGTCTTGGAGGCATCTCTTCCACGGAGGAGATGGA--CC  145
            |||||||||||||.||.|||||.|||||.|||||||||||.||.|||||.||||||||||||||||||||  ||
Sbjct   74  AGGAGAAGACCACGACCACTCTAATCGAACCCATTCGTCTCGGCGGCATTTCTTCCACGGAGGAGATGGATTCC  147

Query  146  TGAAGGTACTACAGTTCAAGAACAAGAAACTGGCAGAGCGGCTGGAACAACGGCAGGCTTGTGAAGATGAACTC  219
              ||||||||.|||||||||||||||||.|||||.||||||.||||.||.|||||.||.||.||.|||||.|||
Sbjct  148  --AAGGTACTGCAGTTCAAGAACAAGAAGCTGGCGGAGCGGTTGGAGCAGCGGCAAGCCTGCGAGGATGAGCTC  219

Query  220  CGAGAACGAATTGAGAAGTTGGAGAAGCGGCAGGCCACAGATGATGCCACACTCCTCATCGTCAATCGCTACTG  293
            ||.||..||||||||||.|||||||||.||||||||||.||||||||||||||||||||||||||.||||||||
Sbjct  220  CGGGAGAGAATTGAGAAATTGGAGAAGAGGCAGGCCACTGATGATGCCACACTCCTCATCGTCAACCGCTACTG  293

Query  294  GGCCCAGCTGGATGAAACTGTGGAAGCCCTTCTCCGATGCCATGAGAGCCAGGGGGAGCTGTCTTCAGCGCCTG  367
            |||||||||||||||||||||.||||||||.||||..|||.|.||||.||||.||||.||||||||||.|.|.|
Sbjct  294  GGCCCAGCTGGATGAAACTGTAGAAGCCCTCCTCCAGTGCTACGAGAACCAGAGGGAACTGTCTTCAGGGACAG  367

Query  368  AGGCACCTGGGACCCAGGAGGGGCCAACATGTGATGGGACTCCTCTCCCAGAGCCGGGGACATCAGAGCTGAGA  441
            |||..||||||..|||.|||||.|..||..||||||.||..||||..|||||.||.|||||||||||.|||||.
Sbjct  368  AGGTGCCTGGGTGCCAAGAGGGCCTGACCCGTGATGTGATCCCTCGACCAGACCCAGGGACATCAGATCTGAGG  441

Query  442  GACCCCTTGCTGATGCAGCTGCGGCCCCCTCTCAGTGAGCCGGCCTTGGCTTTTGTGGTGGCACTGGGTGCCAG  515
            ||.||..|||...|||||.|.||..|||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  442  GAACCGCTGCCAGTGCAGTTTCGAGCCCCTCTCAGTGAGCCGGCCTTGGCTTTTGTGGTGGCACTGGGCGCCAG  515

Query  516  CAGCAGTGAGGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTGGTAG  589
            ||||.|||||||.|||||||||.|||||||.||.||.|||||.|||||||||||.||.||||||||.|||||.|
Sbjct  516  CAGCTGTGAGGAAGTGGAGCTGCAGCTGCAGGGTCGGATGGAATTCTCCAAGGCTGCCGTGTCTCGGGTGGTCG  589

Query  590  AGGCCTCAGACCGCCTACAGCGCCGGGTGGAGGAACTCTGTCAGCGAGTGTACAGCCGAGGGGACAGTGA-GCC  662
            |||||||.||||||||.||.||.|.||||||.|||||||||||||||||.||||||||.||||||||||| |||
Sbjct  590  AGGCCTCGGACCGCCTGCAACGGCAGGTGGAAGAACTCTGTCAGCGAGTATACAGCCGGGGGGACAGTGAGGCC  663

Query  663  CCTCAGTGAGGCGGCTCAGGCACACACCCGAGAGCTGGGCCGTGAGAACCGGCGACTGCAGGACTTGGCCACTC  736
            ||| .|.||||.|||.|.||..|.||||||.|||||.|||.|.||||||||..|.||.||||||||||||||||
Sbjct  664  CCT-GGGGAGGTGGCACGGGTGCGCACCCGGGAGCTAGGCAGAGAGAACCGTAGGCTACAGGACTTGGCCACTC  736

Query  737  AGCTGCAGGAGAAACACCACCGCATCTCATTGGAGTACTCCGAGCTCCAGGATAAAGTGACATCGGCAGAGACC  810
            |||||||.||||||||||||||||||||.|||||||||||.||||||||.|||||||||||||||.||||||||
Sbjct  737  AGCTGCAAGAGAAACACCACCGCATCTCGTTGGAGTACTCTGAGCTCCAAGATAAAGTGACATCGACAGAGACC  810

Query  811  AAGGTGCTGGAGATGGAGACAACAGTGGAGGACTTGCAGTGGGACATCGAGAAGCTGCGGAAGCGAGAGCAAAA  884
            |||||.||.|||||||||||.||||||||||||.|||||||||||||.|||||||||||.||||||||.||.||
Sbjct  811  AAGGTCCTAGAGATGGAGACCACAGTGGAGGACCTGCAGTGGGACATTGAGAAGCTGCGCAAGCGAGAACAGAA  884

Query  885  GCTCAATAAGCACCTGGCAGAGGCCTTAGAGCAGCTTAACTCTGGCTACTATGTATCTGGGAGCTCCTCAGGCT  958
            |||||||||||||.|||||||||||||.||||||||.|||||.|||||||||||.||||||||||||.||||||
Sbjct  885  GCTCAATAAGCACTTGGCAGAGGCCTTGGAGCAGCTCAACTCCGGCTACTATGTGTCTGGGAGCTCCACAGGCT  958

Query  959  TCCAGGGGGGCCAGATCACACTCAGCATGCAGAAGTTTGAGATGCTGAATGCAGAGTTAGAGGAAAACCAGGAA  1032
            |.|||||.||||||||.|||||||||||||||||||||||||||.|||||||||||.|.||.|||||.||||||
Sbjct  959  TTCAGGGAGGCCAGATTACACTCAGCATGCAGAAGTTTGAGATGTTGAATGCAGAGCTGGAAGAAAATCAGGAA  1032

Query 1033  CTGGCCAACAGCCGTATGGCAGAGCTGGAGAAACTGCAGGCCGAACTTCAGGGGGCTGTGCGGACCAATGAGCG  1106
            .|||||||.|||||.|||||||||||||||||.||||||||.||.||||||||.||.||.||||||||||||||
Sbjct 1033  TTGGCCAATAGCCGAATGGCAGAGCTGGAGAAGCTGCAGGCGGAGCTTCAGGGAGCCGTTCGGACCAATGAGCG  1106

Query 1107  CCTCAAGGTGGCCCTGCGGAGCCTTCCTGAGGAGGTAGTGCGGGAGACGGGGGAGTACCGCATGCTGCAGGCCC  1180
            .|||||||||||||||||.|||||||||||||||||.||.||.|||||.|||||||||||||||||||||||.|
Sbjct 1107  TCTCAAGGTGGCCCTGCGTAGCCTTCCTGAGGAGGTCGTTCGTGAGACAGGGGAGTACCGCATGCTGCAGGCAC  1180

Query 1181  AATTCTCACTGCTCTACAACGAGTCTCTGCAAGTGAAGACCCAGCTAGACGAGGCTCGGGGCCTGCTGCTGGCC  1254
            |.|||||.|||||||||||.||||||.|||||||||||||||||||.||.|||||.|||||..|||||||||||
Sbjct 1181  AGTTCTCCCTGCTCTACAATGAGTCTTTGCAAGTGAAGACCCAGCTCGATGAGGCCCGGGGGTTGCTGCTGGCC  1254

Query 1255  ACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGAGCGACGAGCTGGGGCTGCAGAAGAAGCTACGCAC  1328
            .|.||||||||||||.||.|||||||.||.||.||||||||.||.||..|||||||||||||||||||.|||||
Sbjct 1255  TCCAAGAACTCCCACTTGAGACACATTGAACATATGGAGAGTGATGAATTGGGGCTGCAGAAGAAGCTGCGCAC  1328

Query 1329  AGAGGTCATTCAGCTGGAGGACACGCTGGCCCAGGTACGCAAGGAGTATGAGATGCTGCGCATCGAGTTTGAGC  1402
            |||.||.||.||||||||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||.|
Sbjct 1329  AGAAGTTATCCAGCTGGAAGACACCCTGGCCCAGGTACGCAAGGAGTACGAGATGCTGCGCATCGAGTTTGAAC  1402

Query 1403  AGAATCTGGCGGCCAACGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCCACCTGATTAGTAGTCTTCAAAAC  1476
            ||||.||.|||||||||||||||||.|||||.||||||||.||.|||||||||||||||||.||.||.||.|||
Sbjct 1403  AGAACCTTGCGGCCAACGAGCAGGCTGGGCCTATCAACCGGGAAATGCGCCACCTGATTAGCAGCCTCCAGAAC  1476

Query 1477  CACAACCACCAGCTAAAAGGGGACGCCCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGATTGGCAA  1550
            |||||.||||||||||||||.||.||||||||||||||||||||.||||||||||||||.|||||||||||.||
Sbjct 1477  CACAATCACCAGCTAAAAGGAGATGCCCAGCGATACAAGCGGAAACTTCGAGAAGTACAGGCTGAGATTGGTAA  1550

Query 1551  GCTCCGGGCCCAGGCCAGTGGCTCTGCCCACTCCACCCCCAACCTGGGCCACCCAGAGGATTCTGGCGTCAGTG  1624
            .||||||||.||||||||.||||||.||||||.||..||||.||||.||||||||||.||..|||||.|||.||
Sbjct 1551  ACTCCGGGCACAGGCCAGCGGCTCTTCCCACTGCATTCCCACCCTGAGCCACCCAGATGACCCTGGCCTCAATG  1624

Query 1625  CCCCAGCCCCAGGGAAAGAGGAGGGTGGGCCAGGCCCTGTCAGTACCCCCGACAACAGAAAGGAGATGGCTCCA  1698
            |||..|||||||||||.||.||..|||||||||||||||...|||||||.|||..||..||||||||||||..|
Sbjct 1625  CCCTTGCCCCAGGGAAGGAAGATAGTGGGCCAGGCCCTGGAGGTACCCCTGACTGCAAGAAGGAGATGGCTTTA  1698

Query 1699  GTGCCTGGCACCACCACTACTACCACTTCAGTGAAGAAGGAGGAGCTGGTCCCCTCTGAAGAGGACTTCCAGGG  1772
            .||.||||..|||||.||.||||..||||..|.|||||.||||||||||||.||||||||||.|||..|||||.
Sbjct 1699  TTGGCTGGAGCCACCTCTGCTACTTCTTCCATAAAGAAAGAGGAGCTGGTCTCCTCTGAAGATGACGCCCAGGC  1772

Query 1773  TATAACCCCTGGGGCCCAGGGCCCTT--CCTCCCGGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCG  1844
            ..|||||||||...|||||||  |||  |||||.||||.|||||||||||||||||.||||||||.||.|||||
Sbjct 1773  CCTAACCCCTGTAACCCAGGG--CTTGCCCTCCAGGGGTCGAGAACCTGAGGCCAGACCCAAGCGAGAACTTCG  1844

Query 1845  GGAACGGGAAGGTCCCAGCCTAGGACCTCCACCTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAGAAGGCCA  1918
            ||||||||||||.||.|||||||||||.|||||||.||||||..||||.||||||||||||||.||.|||||||
Sbjct 1845  GGAACGGGAAGGGCCTAGCCTAGGACCCCCACCTGCAGCCTCAACTCTGTCAAGGGCTGATCGAGAAAAGGCCA  1918

Query 1919  AGGTGGAAGAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAGAGCTCAAGAAGGCCCAGGAG  1992
            |||||||||||.||||..||||||||||.|||||.|||||.||||||||||||||||||||||||||.|||||.
Sbjct 1919  AGGTGGAAGAAGCCAAAAGGAAGGAATCGGAACTGCTCAAAGGTCTCCGAGCAGAGCTCAAGAAGGCTCAGGAA  1992

Query 1993  AGCCAGAAGGAGATGAAACTGCTGCTGGATATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATAAGGTGCAGCT  2066
            |||||||||||||||||.|||||.|||||.||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 1993  AGCCAGAAGGAGATGAAGCTGCTCCTGGACATGTACAAGTCAGCACCCAAGGAGCAGCGGGACAAGGTGCAGCT  2066

Query 2067  CATGGCAGCGGAACGCAAGGCTAAGGCCGAGGTTGATGAGCTGCGGAGCCGCATCCGGGAATTGGAGGAGAGGG  2140
            |||||||||.||.||||||||.|||||.|||||.||||||||.||||||||||||||.||..||||.||..|.|
Sbjct 2067  CATGGCAGCTGAGCGCAAGGCCAAGGCTGAGGTGGATGAGCTTCGGAGCCGCATCCGAGAGCTGGAAGAACGAG  2140

Query 2141  ATCGAAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCGGCGCATTCGGCAGGCAGAGGAGCAGATAGAA  2214
            |.|||||.||.|||||||||||.||||||||.||||||||||||||.||.|||||||||||.||||||||.|||
Sbjct 2141  ACCGAAGAGAAAGCAAGAAGATTGCGGATGAAGATGCCCTGCGGCGGATCCGGCAGGCAGAAGAGCAGATTGAA  2214

Query 2215  CACCTGCAGCGCAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGCTCTGCTCTCAGAGATGGATGTGACAGGTCA  2288
            |||.||||.|||||..||||||||||||||||||||||||||||..||||.||.|||||||||||.||||||||
Sbjct 2215  CACTTGCAACGCAAATTGGGTGCCACCAAGCAGGAGGAGGAGGCGTTGCTGTCGGAGATGGATGTAACAGGTCA  2288

Query 2289  GGCTTTTGAGGACATGCAGGAACAGAACGGGCGGCTGCTACAGCAGTTGCGGGAAAAGGATGATGCCAACTTTA  2362
            |||||||||.|||||||||||.||.|||||||||||.||.||||||||.||||||||||||||.||||||||.|
Sbjct 2289  GGCTTTTGAAGACATGCAGGAGCAAAACGGGCGGCTACTTCAGCAGTTACGGGAAAAGGATGACGCCAACTTCA  2362

Query 2363  AGCTAATGTCAGAGCGGATCAAGGCCAACCAGATTCACAAGCTGCTGCGGGAGGAGAAGGATGAGTTGGGCGAG  2436
            ||||.|||||.|||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct 2363  AGCTCATGTCGGAGCGGATCAAGGCCAACCAGATTCACAAGCTGCTCCGAGAGGAGAAGGATGAGTTGGGCGAG  2436

Query 2437  CAGGTCCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCTGCTGACTGTGCAGAAGCTGGAGGAGAAGGAGCGAGC  2510
            |||||.||||||||.|||||||||||||||||||||||||||||.||.||||||||.||||||||||||||.||
Sbjct 2437  CAGGTTCTTGGCCTTAAGTCCCAGGTGGATGCCCAGCTGCTGACCGTACAGAAGCTTGAGGAGAAGGAGCGGGC  2510

Query 2511  CTTGCAGGGCAGCCTCGGGGGTGTGGAGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAACAAGCGGA  2584
            ..|||||||||||||||||||||||||.||||||.||||.|||||||||||.||.||||||||.||.|||.|.|
Sbjct 2511  TCTGCAGGGCAGCCTCGGGGGTGTGGAAAAGGAGTTGACTCTGCGCAGCCAGGCTCTGGAGCTTAATAAGAGAA  2584

Query 2585  AGGCTGTAGAAGCCGCCCAGCTGGCCGAGGACCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGAG  2658
            |||||||||||||.||||||.||||.||||||||||||||||||.|||||||.|||||||||||.||.||.|||
Sbjct 2585  AGGCTGTAGAAGCAGCCCAGTTGGCTGAGGACCTGAAGGTGCAGTTGGAGCATGTGCAGACTCGACTTCGAGAG  2658

Query 2659  ATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCTCGTGAGAAAGAGAGCTTCAACCTCAAGAGGGCTCAGGAGGA  2732
            ||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||||||||||||||||||||
Sbjct 2659  ATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCCCGGGAGAAGGAGAGCTTCAACCTCAAGAGGGCTCAGGAGGA  2732

Query 2733  CATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGAGGAAGGTGGAGGTCTACGCAGATGCCGACGAAATCCTCC  2806
            |||.||.|||||.|||||.||.||.||.||.|||.||||.||||||||.||.||||||||.|||||.|||||.|
Sbjct 2733  CATTTCCCGGCTTCGGCGAAAACTAGAGAAACAGCGGAAAGTGGAGGTTTATGCAGATGCTGACGAGATCCTGC  2806

Query 2807  AGGAGGAGATCAAGGAGTACAAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCTT  2880
            |||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct 2807  AGGAGGAGATCAAGGAGTACAAGGCCCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCCGTGCTT  2880

Query 2881  ACCAAGTGCTTCCACGTTTTCTGCTTCGAGTGCGTGCGGGGCCGCTATGAGGCCCGCCAGAGGAAGTGCCCCAA  2954
            ||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||.||.|||||
Sbjct 2881  ACCAAGTGCTTCCACGTTTTCTGCTTTGAATGTGTGCGGGGCCGCTATGAGGCCCGCCAGAGGAAATGTCCCAA  2954

Query 2955  GTGCAACGCGGCCTTTGGTGCCCACGACTTCCATCGTATCTACATCAGC  3003
            |||||||||.|||||||||||||||||||||||.|||.|.|||||||||
Sbjct 2955  GTGCAACGCAGCCTTTGGTGCCCACGACTTCCACCGTGTGTACATCAGC  3003

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