Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02510
Subject:
XR_001782114.1
Aligned Length:
1993
Identities:
730
Gaps:
1171

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGAGGCTACCGGGCGTGGGGCGGGCCGGAGCTCGCCGTTGCCGTGGTTACCCAGAGGCACGTGCGCAGTCCCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGCGGCCGGGGGAAGCTGCTCCGCGCGCGCTGCCGGAGGAAGCGCCGCCGGGTCCGCTCTGCTCTGGGTCCGG  148

Query    1  -------ATGGATTCAATGCCTGAGCCCGCGTCCCGCTG--TCTTCTGCTTCTTCCCTTGCTGCTGCTGCT---  62
                   |||||.||.|||.||||||.||||.|||||||  ||||.|     ||||.||||||||||||||   
Sbjct  149  CTGGGCCATGGAGTCCATGTCTGAGCTCGCGCCCCGCTGCCTCTTAT-----TTCCTTTGCTGCTGCTGCTTCC  217

Query   63  GCTGCTGCTGCTGCCGGCCCCGGAGCTGGGCCCGAGCCAGGCCGGAGCTGAGGAGAACGACTGGGTTCGCCTGC  136
            |||||||||.||.||.||||||.||||.||||||||.|..|||||.||||||||||.|||||||||.||..|||
Sbjct  218  GCTGCTGCTCCTTCCTGCCCCGAAGCTAGGCCCGAGTCCCGCCGGGGCTGAGGAGACCGACTGGGTGCGATTGC  291

Query  137  CCAGCAAATGCGAAGTGTGTAAATATGTTGCTGTGGAGCTGAAGTCAGCCTTTGAGGAAACCGGCAAGACCAAG  210
            |||||||||||||||||||.||.|||||||||||||||||||||||.||.|||||||||||.||.|||||||||
Sbjct  292  CCAGCAAATGCGAAGTGTGCAAGTATGTTGCTGTGGAGCTGAAGTCGGCTTTTGAGGAAACGGGAAAGACCAAG  365

Query  211  GAGGTGATTGGCACGGGCTATGGCATCCTGGACCAGAAGGCCTCTGGAGTCAAATACACCAAGTC---------  275
            ||.|||||||.|||.||||||||||||||||||..|||||.||||||||||||.|||||||||||         
Sbjct  366  GAAGTGATTGACACCGGCTATGGCATCCTGGACGGGAAGGGCTCTGGAGTCAAGTACACCAAGTCCATTTCAGA  439

Query  276  -------------------------------------------------GGACTTGCGGTTAATCGAAGTCACT  300
                                                             ||||||.||||||||.|||||||||
Sbjct  440  GACCCCAGGCCAGATGACCTATCTTCCTTCCAGCTCTGCCTTCCCATTGGGACTTACGGTTAATTGAAGTCACT  513

Query  301  GAGACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAGGAGAGGACCGGCAGCAATCGATTTGCCAAGGG  374
            ||||||||||||||||||||.|||||.||.||||||||||||||||||||.||||||||.||.|||||||||||
Sbjct  514  GAGACCATTTGCAAGAGGCTTCTGGACTACAGCCTGCACAAGGAGAGGACTGGCAGCAACCGGTTTGCCAAGGG  587

Query  375  CATGTCAGAGACCTTTGAGACATTACACAACCTGGTACACAAAGGGGTCAAGGTGGTGATGGACATCCCCTATG  448
            .|||||.||||||||||||||..|.||||||||.||.||||||||||||||||||||||||||.||||||||||
Sbjct  588  TATGTCGGAGACCTTTGAGACGCTGCACAACCTAGTCCACAAAGGGGTCAAGGTGGTGATGGATATCCCCTATG  661

Query  449  AGCTGTGGAACGAGACTTCTGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGATGTGCTGGTGGAAGAGTTTGAG  522
            ||||||||||||||||.||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct  662  AGCTGTGGAACGAGACCTCAGCAGAGGTGGCTGACCTCAAGAAGCAGTGTGACGTGCTGGTGGAAGAGTTTGAA  735

Query  523  GAGGTGATCGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGCGCCAACCACGTGCT  596
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  736  GAGGTGATTGAGGACTGGTACAGGAACCACCAGGAGGAAGACCTGACTGAATTCCTCTGTGCCAACCACGTGCT  809

Query  597  GAAGGGAAAAGACACCAGTTGCCTGGCAGAGCAGTGGTCCGGCAAGAAGGGAGACACAGCTGCCCTGGGAGGGA  670
            |||||||||.|||||.||||||||.|||||||.||||||.|||||||||||.||||.|||..||||||||||||
Sbjct  810  GAAGGGAAAGGACACGAGTTGCCTAGCAGAGCGGTGGTCTGGCAAGAAGGGGGACATAGCCTCCCTGGGAGGGA  883

Query  671  AGAAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGGCGGCAGGAGTAGCAGCAGCAAACAAAGGAAGGAG  744
            ||||.||||||||||||.|||||.|.|.||||      |||..|...|||.||||||||||.||.||||||||.
Sbjct  884  AGAAATCCAAGAAGAAGCGCAGCGGAGTCAAG------GGCTCCTCCAGTGGCAGCAGCAAGCAGAGGAAGGAA  951

Query  745  CTGGGTGGCCTTGAGGGA-GACCCCAGCCCCGAGGAGGATGAGGGCATCCAGAAGGCATCCCCTCTCACACACA  817
            |||||.|||| ||.|||| ||..|||.|.||||||||||.|||||..|.|||||||||||.||.|||.||||||
Sbjct  952  CTGGGGGGCC-TGGGGGAGGATGCCAACGCCGAGGAGGAGGAGGGTGTGCAGAAGGCATCGCCCCTCCCACACA  1024

Query  818  GCCCCCCTGATGAGCTC---------------------------------------------------------  834
            ||||||||||||||||.                                                         
Sbjct 1025  GCCCCCCTGATGAGCTGTGAGCCCAGCTTAGTGTCCTTGAATCAAGACCCCTGACTTCAGAGCTTGGGACACGC  1098

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1099  ACAGCGCAGCGCAGCGCAGCTCCAGCAAGGACAGCTGCTGTCCAGCATCAGGTCTCCTCCCTTGGCTGTGCCCC  1172

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1173  TTTCCTTCCCTTGAACAACAGCAAGAGGTGGAAGGATCTGGGGTGCTGGGAGACGGCACCCCAAAGGGAAGAGG  1246

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1247  AGGAGGAGCAGAAGGCAGCTCTCTTTCTACACAGTCCCCCTCACGAGCTCCGGGGTCCACCCAGCATCCCCAGG  1320

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1321  CTGAGATCCAGGCTCCTGACATGGAAGCTGAAGAGCATGAGGCACATAAGATGCTCACCAGCGCCCCCTTCAGC  1394

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1395  CAGGAAGGACTCCGTGCAGCCTCAGCAGCCAGGCCTGCCTCTTCCTTCCACCAAGCATTCTCTTCTGCTGGTCC  1468

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1469  TTGTCGGATGGTAAATTCGAGAACTTCCAGGACAAACTCGGGTGTGGCACAAAGGGGCTGGACGCCAGAGCCAG  1542

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1543  AGCCACGCCAGAGACTGCAGAGAGGGCACCTGACCTAACCCCCCTGGAAAGCCAATCTGCAGTTCCCGTGTCCA  1616

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1617  CCCACTCCTCCTGAGGACGCCTCATGCTCTGCCCAGCCCTTCTCCCAGGGCTACCAGAGTAAACACCTTTTGGC  1690

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1691  CTTTCGGTTTGGTTCCTGGGTCCTCATCAGCCTCCAGAGTGTCCCCTCATCGATCTTTTTTGCCTTTGTCCCCC  1764

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1765  AATCCCAGGGGCTGGAAGGCCATCACCATCATTGGAGGCTTAACCTGTCAGTTACTAGGAGGTGCTGGGAGCGC  1838

Query  835  --------------------------------------------------------------------------  834
                                                                                      
Sbjct 1839  CCGGGGTTGGTTTGGGGTAATCACTCACTGGCTCTCAGCCTTCTAACACTGCAGCCCCTTAATACAGTTCCTTC  1912

Query  835  ---------------------------------------------------------------------  834
                                                                                 
Sbjct 1913  TGTTGTGGTGACTCCCACGCCCCCACACACACACCATAAAATTATTTCGATGCTGTTTCATAACTGTAA  1981

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