Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02754
Subject:
XR_001737078.1
Aligned Length:
2765
Identities:
2346
Gaps:
419

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTTCTATAGCAACCACCCCAGGTCCACGCCTAGACGGCGAGTGGCAAGGGTCAAAATAGATTCGCCCAGTAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCCCTCGACCTGTTCGGTCCTCGCCTTCAGTGCGATAGACCTTTAAGCGTCACGTGACTCCCCTCGGGCTTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCCTCCTCTTTCCCCTCCCCAGGCCCAGGCGAGCGCTGGTGTGGACGGGAAGCTCCCGGCCCGGCGAACTAAC  222

Query    1  -------------------------------------------------------------ATGGAAGTGAGAA  13
                                                                         |||||||||||||
Sbjct  223  TGGAGCACGGAGCTGCAGCCGGTTGGGCCGGTGTACTTTCCCGCTCTGGAAAGGAAGAGAAATGGAAGTGAGAA  296

Query   14  AGTTGAGCATTTCCTGGCAGTTCTTGATAGTTCTGGTTCTGATCCTGCAAATTCTGTCTGCGTTGGATTTTGAC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGTTGAGCATTTCCTGGCAGTTCTTGATAGTTCTGGTTCTGATCCTGCAAATTCTGTCTGCGTTGGATTTTGAC  370

Query   88  CCATACAGAGTCCTAGGGGTCAGCCGAACAGCCAGTCAGGCTGATATTAAAAAGGCTTATAAGAAGCTCGCCCG  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCATACAGAGTCCTAGGGGTCAGCCGAACAGCCAGTCAGGCTGATATTAAAAAGGCTTATAAGAAGCTCGCCCG  444

Query  162  GGAATGGCATCCTGACAAAAACAAAGATCCTGGAGCAGAAGACAAGTTCATTCAAATCAGTAAGGCTTACGAGA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGAATGGCATCCTGACAAAAACAAAGATCCTGGAGCAGAAGACAAGTTCATTCAAATCAGTAAGGCTTACGAGA  518

Query  236  TTCTTTCAAATGAAGAAAAGAGATCAAATTATGATCAATATGGAGACGCTGGAGAGAACCAGGGCTACCAGAAG  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCTTTCAAATGAAGAAAAGAGATCAAATTATGATCAATATGGAGACGCTGGAGAGAACCAGGGCTACCAGAAG  592

Query  310  CAGCAACAGCAGCGAGAGTATCGCTTCCGCCATTTCCATGAAAATTTTTATTTTGATGAATCCTTTTTTCACTT  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAGCAACAGCAGCGAGAGTATCGCTTCCGCCATTTCCATGAAAATTTTTATTTTGATGAATCCTTTTTTCACTT  666

Query  384  CCCTTTTAATTCTGAACGGCGGGACTCAATTGACGAAAAGTATTTATTGCACTTTTCACATTATGTGAATGAAG  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCCTTTTAATTCTGAACGGCGGGACTCAATTGACGAAAAGTATTTATTGCACTTTTCACATTATGTGAATGAAG  740

Query  458  TGGTTCCAGATAGCTTCAAGAAACCCTACCTCATCAAGATCACCTCCGATTGGTGCTTTAGCTGCATTCATATC  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGTTCCAGATAGCTTCAAGAAACCCTACCTCATCAAGATCACCTCCGATTGGTGCTTTAGCTGCATTCATATC  814

Query  532  GAGCCTGTGTGGAAAGAAGTCATTCAAGAACTGGAAGAATTGGGTGTAGGAATTGGCGTGGTCCATGCTGGGTA  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAGCCTGTGTGGAAAGAAGTCATTCAAGAACTGGAAGAATTGGGTGTAGGAATTGGCGTGGTCCATGCTGGGTA  888

Query  606  TGAGAGACGCCTGGCCCATCACCTAGGGGCACACAGCACGCCCTCTATCCTAGGAATCATTAACGGGAAAATCT  679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGAGAGACGCCTGGCCCATCACCTAGGGGCACACAGCACGCCCTCTATCCTAGGAATCATTAACGGGAAAATCT  962

Query  680  CCTTCTTCCACAATGCAGTTGTCCGTGAAAATCTGCGACAATTTGTAGAAAGTCTTCTTCCAGGGAACTTGGTG  753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTTCTTCCACAATGCAGTTGTCCGTGAAAATCTGCGACAATTTGTAGAAAGTCTTCTTCCAGGGAACTTGGTG  1036

Query  754  GAGAAAGTTACAAATAAAAATTACGTCAGATTCCTCTCTGGCTGGCAGCAAGAGAATAAGCCTCATGTCCTTCT  827
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAGAAAGTTACAAATAAAAATTACGTCAGATTCCTCTCTGGCTGGCAGCAAGAGAATAAGCCTCATGTCCTTCT  1110

Query  828  GTTTGACCAAACGCCCATTGTGCCACTGTTATACAAGTTGACTGCCTTTGCATACAAAGATTATTTATCATTTG  901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTTTGACCAAACGCCCATTGTGCCACTGTTATACAAGTTGACTGCCTTTGCATACAAAGATTATTTATCATTTG  1184

Query  902  GATATGTATATGTGGGTTTGAGAGGGACGGAAGAGATGACAAGGCGGTACAACATCAATATCTACGCCCCTACC  975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GATATGTATATGTGGGTTTGAGAGGGACGGAAGAGATGACAAGGCGGTACAACATCAATATCTACGCCCCTACC  1258

Query  976  CTCTTGGTCTTTAAAGAACATATAAACAGGCCTGCCGATGTTATCCAGGCCCGAGGTATGAAGAAGCAAATCAT  1049
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTCTTGGTCTTTAAAGAACATATAAACAGGCCTGCCGATGTTATCCAGGCCCGAGGTATGAAGAAGCAAATCAT  1332

Query 1050  TGACGACTTCATCACCCGAAACAAATATCTATTGGCAGCCAGGCTCACCAGCCAGAAGTTGTTCCATGAACTCT  1123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TGACGACTTCATCACCCGAAACAAATATCTATTGGCAGCCAGGCTCACCAGCCAGAAGTTGTTCCATGAACTCT  1406

Query 1124  GCCCTGTGAAACGGTCGCATCGACAGAGGAAGTACTGTGTGGTTTTATTGACTGCTGAGACTACCAAGTTGAGC  1197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCCCTGTGAAACGGTCGCATCGACAGAGGAAGTACTGTGTGGTTTTATTGACTGCTGAGACTACCAAGTTGAGC  1480

Query 1198  AAACCCTTTGAGGCTTTCCTGTCCTTTGCCCTGGCAAACACTCAAGACACAGTGAGATTTGTGCATGTCTACAG  1271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAACCCTTTGAGGCTTTCCTGTCCTTTGCCCTGGCAAACACTCAAGACACAGTGAGATTTGTGCATGTCTACAG  1554

Query 1272  CAATCGGCAGCAGGAGTTTGCCGACACCTTACTACCAGACAGTGAGGCGTTTCAAGGGAAATCAGCGGTGTCTA  1345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAATCGGCAGCAGGAGTTTGCCGACACCTTACTACCAGACAGTGAGGCGTTTCAAGGGAAATCAGCGGTGTCTA  1628

Query 1346  TTTTAGAAAGGCGCAACACAGCAGGAAGGGTGGTGTATAAAACCCTGGAAGACCCTTGGATTGGGAGTGAGAGT  1419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TTTTAGAAAGGCGCAACACAGCAGGAAGGGTGGTGTATAAAACCCTGGAAGACCCTTGGATTGGGAGTGAGAGT  1702

Query 1420  GACAAATTTATCCTCTTGGGCTATCTCGACCAGCTGCGTAAAGATCCAGCTCTTCTGTCCTCTGAAGCAGTGCT  1493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GACAAATTTATCCTCTTGGGCTATCTCGACCAGCTGCGTAAAGATCCAGCTCTTCTGTCCTCTGAAGCAGTGCT  1776

Query 1494  TCCTGACCTGACCGATGAACTTGCCCCTGTTTTTCTCCTTCGATGGTTCTACTCTGCTTCTGACTACATCTCAG  1567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCCTGACCTGACCGATGAACTTGCCCCTGTTTTTCTCCTTCGATGGTTCTACTCTGCTTCTGACTACATCTCAG  1850

Query 1568  ACTGCTGGGATAGCATTTTTCACAACAACTGGAGGGAAATGATGCCCCTGCTGTCCCTGATCTTCTCTGCCCTC  1641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ACTGCTGGGATAGCATTTTTCACAACAACTGGAGGGAAATGATGCCCCTGCTGTCCCTGATCTTCTCTGCCCTC  1924

Query 1642  TTCATCCTCTTCGGCACTGTCATCGTTCAGGCTTTCAGCGACTCTAATGATGAGCGAGAGTCAAGCCCTCCAGA  1715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TTCATCCTCTTCGGCACTGTCATCGTTCAGGCTTTCAGCGACTCTAATGATGAGCGAGAGTCAAGCCCTCCAGA  1998

Query 1716  AAAAGAGGAAGCCCAAGAGAAGACTGGGAAAACTGAGCCAAGCTTCACCAAAGAAAACAGCAG-----------  1778
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct 1999  AAAAGAGGAAGCCCAAGAGAAGACTGGGAAAACTGAGCCAAGCTTCACCAAAGAAAACAGCAGGTTTCTCTAAC  2072

Query 1779  --------------------------------------------------------------------------  1778
                                                                                      
Sbjct 2073  AAAACACCAGACTCACCTCCCCGGCACCTGCCCCCCAGATCCTGTCATCTGATAACGCAGCATTGGAACATAGA  2146

Query 1779  ----------------------------------CAAGATTCCTAAAAAAGGCTTTGTGGAGGTAACTGAACTC  1818
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GTGTAGAGAAGAACTCTCATGCACCTCCTCCCATCAAGATTCCTAAAAAAGGCTTTGTGGAGGTAACTGAACTC  2220

Query 1819  ACAGATGTAACATACACCAGTAACTTGGTACGTCTGAGGCCAGGCCACATGAATGTGGTCCTCATCCTGTCGAA  1892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  ACAGATGTAACATACACCAGTAACTTGGTACGTCTGAGGCCAGGCCACATGAATGTGGTCCTCATCCTGTCGAA  2294

Query 1893  TTCTACCAAGACCAGCCTACTACAGAAATTTGCTTTGGAGGTCTACACATTTACTGGGAGCAGCTGCCTACACT  1966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TTCTACCAAGACCAGCCTACTACAGAAATTTGCTTTGGAGGTCTACACATTTACTGGGAGCAGCTGCCTACACT  2368

Query 1967  TCTCCTTCCTGAGTCTAGATAAACACAGAGAATGGCTAGAATACTTACTAGAATTTGCTCAAGATGCAGCTCCA  2040
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  TCTCCTTCCTGAGTCTAGATAAACACAGAGAATGGCTAGAATACTTACTAGAATTTGCTCAAGATGCAGCTCCA  2442

Query 2041  ATCCCAAACCAATATGATAAGCATTTCATGGAGCGTGACTACACTGGTTATGTACTGGCTCTGAATGGCCACAA  2114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  ATCCCAAACCAATATGATAAGCATTTCATGGAGCGTGACTACACTGGTTATGTACTGGCTCTGAATGGCCACAA  2516

Query 2115  GAAATACTTCTGCCTCTTCAAGCCCCAAAAGACAGTCGAAGAGGAGGAAGCCATAGGGTCGTGCAGTGATGTTG  2188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  GAAATACTTCTGCCTCTTCAAGCCCCAAAAGACAGTCGAAGAGGAGGAAGCCATAGGGTCGTGCAGTGATGTTG  2590

Query 2189  ACTCTTCCCTCTACCTGGGTGAATCTCGAGGGAAACCTTCCTGTGGCCTTGGATCCAGGCCCATCAAAGGAAAG  2262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  ACTCTTCCCTCTACCTGGGTGAATCTCGAGGGAAACCTTCCTGTGGCCTTGGATCCAGGCCCATCAAAGGAAAG  2664

Query 2263  TTGAGCAAGCTCTCTTTATGGATGGAACGCCTGCTGGAGGGCTCCTTACAGAGGTTTTATATCCCATCATGGCC  2336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  TTGAGCAAGCTCTCTTTATGGATGGAACGCCTGCTGGAGGGCTCCTTACAGAGGTTTTATATCCCATCATGGCC  2738

Query 2337  TGAACTAGAC-----------------  2346
            ||||||||||                 
Sbjct 2739  TGAACTAGACTGAGAGGATTTTCCAAA  2765

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