Nucleotide Global Alignment

Description

Query:
ccsbBroad304_02802
Subject:
NR_027513.3
Aligned Length:
3515
Identities:
903
Gaps:
2612

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG  74

Query    1  ----------------------ATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT  52
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT  148

Query   53  TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG  126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG  222

Query  127  ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAATGAGGCAGCTGTGACTGTGTCAAGGGAAGC  200
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  223  ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCA-------------------------------  265

Query  201  CACGACTCTGACCATAGTCTTCTCTCAGCTTCCACTGCCGTCTCCACAGGAAACCCAGAAGTTCTGTGAACAAG  274
                                                             |||||||||||||||||||||||||
Sbjct  266  -------------------------------------------------GAAACCCAGAAGTTCTGTGAACAAG  290

Query  275  TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAG  348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  291  TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAG------------------  346

Query  349  CTGGTACGGGGCGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAAC  422
                                                                                      
Sbjct  347  --------------------------------------------------------------------------  346

Query  423  TCAGAGCCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATAC  496
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  347  -----GCCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATAC  415

Query  497  CAAGAGATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAA  570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  416  CAAGAGATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAA  489

Query  571  ATGGAGCAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAA  644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  490  ATGGAGCAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAA  563

Query  645  CCACAATCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGC  718
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  564  CCACAATCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGC  637

Query  719  TCATAATCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAG  792
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  638  TCATAATCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAG  711

Query  793  AATGGGAAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGA  866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  712  AATGGGAAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGA  785

Query  867  TGATTTGGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTG  940
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  786  TGATTTGGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTG  859

Query  941  TTTTAAAGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTA  1014
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  860  TTTTAAAGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTA  933

Query 1015  CTTATTAATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTA--------  1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  934  CTTATTAATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTT  1007

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1008  CAGGCTCATTTGTACTCTCTTCCCCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAG  1081

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1082  AATGCTTGCTGGATTGAAAGGGAGTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAG  1155

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1156  GCCAGATTGACACCTATTTATAAACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATT  1229

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1230  TCTCATTCCTGAGTCATTTCTCAGAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGT  1303

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1304  TTTCATTGTAAAGATGTTGATGGTCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGT  1377

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1378  TTCTTTTTACCAGAAATACAGTGGATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTG  1451

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1452  ATTCTAATCAGAAGTATATTTAGAACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTT  1525

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1526  CACCATGTTATATATTATTATCAGCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATAT  1599

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1600  TGGCATTGAGCTCATTTGTTAGGTTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGT  1673

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1674  CCTTGGTTACGTGTGTCCCCAAATGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATT  1747

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1748  TTATGTAATTTTAAGGGCCTTTTCAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAG  1821

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1822  TCTAGAAGACTGCATATTGGAAAGCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTA  1895

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1896  TGCATGTCCTACAGGTCTCCGCCACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGC  1969

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 1970  CTTTCTGCTGTCTTTAGGTATAATCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGG  2043

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2044  TTGAAATTCCTTAAGCCAAATGAGTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCAT  2117

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2118  GAAGGGAAGGAACTAAAATCAAACTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGT  2191

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2192  ACAACAGTCTAGTTCTTTTATCCTTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCA  2265

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2266  AATTCATGTTATTAACATCAGACTTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACC  2339

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2340  TCTAGCTGAATTATTCTCTCAGGTCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATG  2413

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2414  ATCAGGGAAAGCACTGATCAATGTAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCC  2487

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2488  CCAAGCTGGAGTGCAGTGGCACACTCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCTCAAGCAATTCTCTGG  2561

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2562  CTTCAGCCTCTCAAGTAGCTGGGACTACAGATGCACACCACCATGTCCAGCTAATTTTTGTATTTTTAGTAGAG  2635

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2636  ATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCA  2709

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2710  AAGTGCTGGGATTACAGATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCC  2783

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2784  ATTTTGGGATAATATCCCACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAA  2857

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2858  GTTAATGAATGTATTAATGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTA  2931

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 2932  AAGGTATCTGAGCACCTTTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAA  3005

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 3006  CCCTGCAAACCTCATGCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTC  3079

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 3080  ATGAATGGCTTCGTTCCATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCT  3153

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 3154  GGCTGTTAAAACGAGGCTGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTC  3227

Query 1081  --------------------------------------------------------------------------  1080
                                                                                      
Sbjct 3228  ACGTTGCCTCCCTTCATCTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAG  3301

Query 1081  -------------------------------------  1080
                                                 
Sbjct 3302  AGCCGTGAGCCAAATAAAGCTCTTTTCTTTTAAACTA  3338

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