Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_02802
- Subject:
- XR_429445.2
- Aligned Length:
- 1873
- Identities:
- 1000
- Gaps:
- 873
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAAATGAATGAATGATGAATAAGAAAGACGGTGAGCCTGAGGCTTGCTTGTGTAGCCTGGCCTAAGGGGCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGGCGTGGCCTGTCCTGGCCTCTGAGAGTGGGATGGTTGGTGCTGTACCTCAGGGGACAGGGCGGGGCGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAGGCGGGGCCAGGCCTGGTCTCTGATAACGGGATGGGTGGTGCTGGACCTCGGGCGGGGCCGGGCCTCGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGGAGGAGGCAGGGCAGGGCCTCTGGGACGGGGCTGGACGGCTTGTTGACGGAAACGAGCCCTTGACGCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTGCGGCCTTCGGC 370
Query 1 -----------ATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTTTGGAGCAGCTC 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTTTGGAGCAGCTC 444
Query 64 CGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAGACCACCGAGGA 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAGACCACCGAGGA 518
Query 138 GTTTAATCGAGAGATGTTCTGGAGAAGACTCAATGAGGCAGCTGTGACTGTGTCAAGGGAAGCCACGACTCTGA 211
||||||||||||||||||||||||||||||||
Sbjct 519 GTTTAATCGAGAGATGTTCTGGAGAAGACTCA------------------------------------------ 550
Query 212 CCATAGTCTTCTCTCAGCTTCCACTGCCGTCTCCACAGGAAACCCAGAAGTTCTGTGAACAAGTCCATGCTGCC 285
||||||||||||||||||||||||||||||||||||
Sbjct 551 --------------------------------------GAAACCCAGAAGTTCTGTGAACAAGTCCATGCTGCC 586
Query 286 ATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAGCTGGTACGGGG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 ATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAGCTGGTACGGGG 660
Query 360 CGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAACTCAGAGCCCTG 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAACTCAGAGCCCTG 734
Query 434 AGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAGATAAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAGATAAC 808
Query 508 AAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAGCAGGC 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 AAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAGCAGGC 882
Query 582 TGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAATCATG 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 TGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAATCATG 956
Query 656 AGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAATCCCA 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 AGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAATCCCA 1030
Query 730 TGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGGAAGAA 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGGAAGAA 1104
Query 804 GGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTTGGCTC 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 GGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTTGGCTC 1178
Query 878 TGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAAT------------------------------ 921
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 TGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATGAACCTTAGTCATTTCTGCTTTATATTTTG 1252
Query 922 ---------------------------TCTGCGAAACTTGTATCTGTTTTAAAGAAGGCACTTGAAATTACAAA 968
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 AGCTATCAGCATTTGGGACCAATTCAGTCTGCGAAACTTGTATCTGTTTTAAAGAAGGCACTTGAAATTACAAA 1326
Query 969 AGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATTAATGCCATTGATCATTGCATGA 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 AGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATTAATGCCATTGATCATTGCATGA 1400
Query 1043 ATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTA------------------------------------ 1080
||||||||||||||||||||||||||||||||||||||
Sbjct 1401 ATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTTCAGGCTCATTTGTACTCTCTTCCCCTCT 1474
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1475 CATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAGAATGCTTGCTGGATTGAAAGGGAGTGCC 1548
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1549 TATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAGGCCAGATTGACACCTATTTATAAACCAT 1622
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1623 ATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATTTCTCATTCCTGAGTCATTTCTCAGAGAT 1696
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1697 TCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGTTTTCATTGTAAAGATGTTGATGGTCTCA 1770
Query 1081 ----------------------- 1080
Sbjct 1771 ATAAAATGCTAACTTGCCAGTGA 1793
