Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03390
Subject:
XR_926258.3
Aligned Length:
4782
Identities:
728
Gaps:
4038

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCTTTTAAGAGCTCGTTGATTCCTCTGCAAGGTGGTGCAGCATCCTCTGTCCCTTCATTCATTTCAGATCTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAGGTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AATCCAAAATGAGAGGACGTATGAGGTTCCAGACCAGCCAGAAGAAAATGAAAGTCCCCATTATGATGATGTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGAGTACTTAAGGCCAGAAAATGATTTATATGCCACTCAGCTGAATACCCATGAGTATGATTTTGTGTCAGTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TATACCATTAAGGGTGAAGAGACCAGCTTGGCCTCTGTCCAGTCAGAAGACAGAGGCTACCTCCTGCCTGATGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GATATACTCTGAACTCCAGGAGGCTCATCCAGGTGAGCCCCAGGAGGACAGGGGCATCTCAATGGAAGGGTTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGTGATGAAGGAAGATCTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTTCTCTACCACCAAGTATTCCTGCTATTCTGATGC  592

Query    1  -------ATGACAGACTCGGCGACAGCTAACGGGGACGACAGGGACCCCGAGATCGAGCTCTTTGTGAAGGCTG  67
                   .||..|||...||.|..||||         .|||.|.||||.|||||..|.||||||||||||||||
Sbjct  593  TGAAGGTTTGGAAGAAAAGGAGGGAGCT---------CACATGAACCCTGAGATTTACCTCTTTGTGAAGGCTG  657

Query   68  GAATCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTC  141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  658  GAATCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGAAAGGAGTC  731

Query  142  GTGTTCAATGTCACCACTGTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCACGCACCC  215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  732  GTGTTCAATGTCACCACTGTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCACGCACCC  805

Query  216  GCCCTTCCTGACCTTCAACGGGGACGTGAAGACAGACGTCAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGA  289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  806  GCCCTTCCTGACCTTCAACGGGGACGTGAAGACAGACGTCAATAAGATCGAGGAGTTCCTGGAGGAGACCTTGA  879

Query  290  CCCCTGAAAAGTACCCCAAACTGGCTGCAAAACACCGGGAATCCAACACAGCGGGCATCGACATCTTTTCCAAG  363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  880  CCCCTGAAAAGTACCCCAAACTGGCTGCAAAACACCGGGAATCCAACACAGCGGGCATCGACATCTTTTCCAAG  953

Query  364  TTTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAA  437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  954  TTTTCTGCCTACATCAAAAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAA  1027

Query  438  GAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGACAAGGGGT  511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028  GAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGACAAGGGGT  1101

Query  512  CCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTC  585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102  CCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGACTGCAATCTGTTGCCCAAGCTCCATGTGGTC  1175

Query  586  AAGATTGTGGCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAA  659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176  AAGATTGTGGCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAA  1249

Query  660  CGCCTATGCCCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCG  733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1250  CGCCTATGCCCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCG  1323

Query  734  CCAAACGCCTCAGCCGATCC------------------------------------------------------  753
            ||||||||||||||||||||                                                      
Sbjct 1324  CCAAACGCCTCAGCCGATCCTGAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCACTCCCCT  1397

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1398  AAGACTCCAGCTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCATCTTGCT  1471

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1472  GGTATCATGGGAACTCCAGCCTGCTATCTTTCATGAAGTTTCATCTCCTAAAAAGCTTACCCAGCCTGAGCTTG  1545

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1546  GGGACCTGTGCAGAGGAAACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGAGAAAAT  1619

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1620  CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAG  1693

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1694  TGCTGGAAAGCCCCTGGACTTGGCTCATTTCTCAGCAAGGGCAGGATAGCACGGGTCCTTTCCATAGAAATATC  1767

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1768  AACAAATTCTAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGGATCTCTGAAGAAAAAAAGTAACCCATTG  1841

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1842  ATCAAATCAGAGGAGAGGAAGCAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAACTTTCTCAGTAGGACACT  1915

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1916  TTATAAGCCTGAGAAAGCTTTGAAAAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCAGGT  1989

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1990  CCCCCTGGAAATTGTGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGGAAAGAGTCCTTTTTTACTGTAGGG  2063

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2064  AAAAGCCCCAAACTGGCCTCCTGGGGGATGAGGGCTGAAATGATCCCGAAGGCCTTTTAATTAGTGTGAAATCC  2137

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2138  TGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAG  2211

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2212  ACCCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCC  2285

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2286  TCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGTTCAGAATTCAGCA  2359

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2360  ACTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAATCAATATTGCTGTTTCTAGATGTCCCTTCTGTGGTTG  2433

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2434  AGCTAGTTTTACAGAGATAAATATATTAAGACAAGGAGGTGGGGGTGTTATATGATCAATGATAGCCATTTGAA  2507

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2508  AGAGAGGGAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAATTCAGAAATTTCTTTATATTTCAGCACTGGA  2581

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2582  TTATCATATAATGCAAGTGACTATGGACTAAGAGTTAGTTATGGTGTCTTATGACTAGATTTATTATGGTATAT  2655

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2656  TAAAGTAACAATAATATTAATATTACCTTCCTTTTTTTTTTTGTTTCAAAAGAGATCTTTCTCCAGATGCTTCA  2729

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2730  GCCTGTCTGGCCTTCTTATCATATGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCC  2803

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2804  CAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAACTATACAGCTATAGGGTAGGAGGCT  2877

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2878  TCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGGATGTATTTG  2951

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2952  TGTTGAGATCTTATTTTATTTTGTATTTATTTATCTTCTTTGACTTGCACAGCACTATTGGGGGTGGGGGAAGC  3025

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3026  AGGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCACTGTCTAGTCAGC  3099

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3100  AATGCCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTAAGATTTTAATAACTGTAAAAAGTAAGCTGGA  3173

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3174  TAAGTAAAATCATGATGGATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAAAGTCAAATGCTTGATAAATT  3247

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3248  CAGAGTCACAGATGTGAGCATAGCTATATTCTTTTAAACGAGAGGTAGAGTGACCTAGCACTAAGCAAATGAGC  3321

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3322  TGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTATCTTGGGAAATGGC  3395

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3396  CCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCA  3469

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3470  AGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCACAGTTCTGTGC  3543

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3544  CCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGATAGGTCATGCCTGAAATAGA  3617

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3618  TCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAA  3691

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3692  GCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCACTGTGAGAGTGTGTGTCTAAAATTAAATTAAACTAGAAGC  3765

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3766  AGCAGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCAC  3839

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3840  GGTGAATCAAGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATGTTAACTCATGGTTAAAACTAAGTACAATG  3913

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3914  ATTCCCAAGGGATCACTTTCTTATTTTTTTAAATGACATTAAGGAGAATCTTAAGAAAGCATCAGAGAAAGACA  3987

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 3988  TGTGCATGTGAAGCACCCTGATTCTGATGTTAGGAAAACTTAAGCGAACAGGACCTGCTGCACACAGCCCCATT  4061

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4062  GTCTTCTATCCATTTCTCTTTATCATTCAAATCAAGCAACATGTGCCCTCCTCATCAACACACATTCTTCCCCT  4135

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4136  TTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAATTATGTATGATCCAAAGTGTGCAT  4209

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4210  AATTTCATTTAACGTTAAAGAAATAGATCCAATTCCTTTCTTGCAACCAAAAATAAATAAAATACGTTGCCTCA  4283

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4284  ATATAAGGTTTGGGCTATTCTGTGTTTCTATAGAAGCAATCTGTTTTTGGTAAAATGTACTTTTAAGGATCCAG  4357

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4358  TCATCTGAAGTATTTTATGTAGAGTTAGAGATTTCACAATATTGACTATACATATATTTAAAATATAAATTATC  4431

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4432  CAGCTGATGTTTGAATTTGTCTTACTTTCCTGGCCACCTCGTTGTCCTATTTTATAAGCTGGGGAGTTAACTAG  4505

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4506  CTTAACAAAAGATGCTTAGCTTTTGTAAAAGAACAAGTGTTTCATTTTACAAAGACACTCCAAATGATAGTTAC  4579

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4580  TTGATTTTCTCGAGACCTTTAACTATGGTGATGAATAACAGGACTTGCTTTCAAGCCTTAATAAATGTAAAATG  4653

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 4654  CCTTTTAATGAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGTGTTCCAGTCTTGA  4727

Query  754  ----------------------------------------------  753
                                                          
Sbjct 4728  TTGGTATTGACTGATTCAAATAAAGTTGGTTTATTTTCAAATATTA  4773

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