Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03803
Subject:
NM_001351028.2
Aligned Length:
1258
Identities:
337
Gaps:
905

Alignment

Query    1  ATGGCAGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACAC  74
            |||                  ||||..||...||||   |...|||||||||||||||||||||||||||||||
Sbjct    1  ATG------------------TGCGGCGTCCGCTGT---ATAAGGTATACCAAGCTTGGCTACGCAGGCAACAC  53

Query   75  TGAGCCCCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct   54  TGAGCCCCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCCCAAAGGA  127

Query  149  GAGTGTTGAGGGGAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  128  GAGTGTTGAGGGGAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACA  201

Query  223  AAGTGGCCGATACGACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  202  AAGTGGCCGATACGACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAA  275

Query  297  ATATCTTCGAGCTGAACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAG-A  369
            ||||||||||||||||||||||||||||||||||||||||                               | .
Sbjct  276  ATATCTTCGAGCTGAACCTGAGGACCATTATTTTTTAATG-------------------------------GTG  318

Query  370  GAGTATCTTGCAGAAATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGC---AGTGCT  440
            ||||.||                                     ||||    |||..|..|||||   |||||.
Sbjct  319  GAGTTTC-------------------------------------ACTC----TTGTCGCCCAGGCTGGAGTGCA  351

Query  441  GGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAG  514
            |    |||||                                                                
Sbjct  352  G----TGGCG----------------------------------------------------------------  357

Query  515  ATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCA  588
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  589  GGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACT  662
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  663  GGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATG  736
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  737  ATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGAC  810
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  811  GTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTC  884
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  885  CATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAGAATGTCG  958
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query  959  TACTCTCAGGAGGCTCCACCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGATTTGAAGAGAGTGGTGGAT  1032
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query 1033  GCTAGGCTGAGGCTCAGCGAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTGTGGAGGTCCAGGTGGTCAC  1106
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query 1107  GCATCACATGCAGCGCTACGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACTCCCGAGTTCTTTCAGGTCT  1180
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

Query 1181  GCCACACCAAGAAGGACTATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCC  1254
                                                                                      
Sbjct  358  --------------------------------------------------------------------------  357

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