Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03844
- Subject:
- XM_011239087.1
- Aligned Length:
- 3239
- Identities:
- 1299
- Gaps:
- 1783
Alignment
Query 1 ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG 74
||||.||||||||.|||||.||||||||
Sbjct 1 ----------------------------------------------ATGTGGAAGTGGCTTATCCTAGGACAGG 28
Query 75 TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT 148
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 29 TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCAGAGGACTACAGTGACC------------------ 84
Query 149 TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG 222
Sbjct 85 -------------------------------------------------------------------------- 84
Query 223 CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT 296
Sbjct 85 -------------------------------------------------------------------------- 84
Query 297 CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC 370
|||||.||||||||||||||||||||.||||||||.|||||||||.||||||||||||||||.|||.|||
Sbjct 85 ----AGCTACCTCCCCTGGTTCGAGGTATTCTATAAGCTCCTTAACATCTTGGCAGATTACACGACGAAACGAC 154
Query 371 AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT 444
||||||.||||||||||||.|||||||||||||||||||.|||||||||||||||.||.|||||||||||.||.
Sbjct 155 AGGAAAGTCAGTGGAATGAACTTCTTGAAACTCTGCACAGACTTCCCATCCCTGATCCTGGAGTGTCTGTTCAC 228
Query 445 CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC 518
|||||.|||||||||||.||.|||||||||||||.||||||.||||||||||||||||||||||||||||||||
Sbjct 229 CTCAGTGTGCATTCTTACTTCACTGTGCCTGATAGCAGAGAGCTTCCCAGCATACCTGAGAATAGAAATCTGAC 302
Query 519 AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC 592
||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.|
Sbjct 303 AGAATATTTTGTGGCTGTGGATGTGAACAACATGTTGCATCTGTACGCCAGCATGCTGTATGAACGCCGGATCC 376
Query 593 TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC 666
|||||||.||||||||.|||||.||..||||.||||||||||||||.||.||.||.|||||||||||.||||||
Sbjct 377 TCATCATCTGCAGCAAGCTCAGTACATTGACGGCCTGCATCCACGGCTCAGCTGCCATGCTCTACCCTATGTAC 450
Query 667 TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT 740
||||||||.|||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 451 TGGCAGCATGTGTACATCCCTGTGCTGCCCCCACATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT 524
Query 741 AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA 814
|||||||||||||||||||||||||||.|||||.|||||||||||.||||||||.||||||.||||.|||||||
Sbjct 525 AGGAATCCATTTAAGTTTAATGGAGAAGGTCAGGAACATGGCCCTCGATGATGTTGTGATCTTGAACGTGGACA 598
Query 815 CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG 888
|||||||||||||||||||.||.|||||||||||||||||||||||.||.||||||||.|||||||||||||||
Sbjct 599 CCAACACCCTGGAAACCCCTTTTGATGACCTCCAGAGCCTCCCAAATGATGTGATCTCCTCCCTGAAGAACAGG 672
Query 889 CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG 962
|||||.||||||||.||||||||.||.|||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct 673 CTGAAGAAGGTCTCTACAACCACAGGTGATGGGGTGGCCAGAGCCTTCCTCAAGGCCCAGGCTGCTTTCTTTGG 746
Query 963 TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT 1036
.||||||||.||.||.||||||||.|||||.||.||.||.|||||||||.|||||||||||||.||.|||||||
Sbjct 747 CAGCTACCGGAATGCACTGAAAATTGAGCCAGAAGAACCCATCACTTTCAGTGAGGAAGCCTTTGTATCCCACT 820
Query 1037 ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT 1110
|||||||.||||||||||..||||||||.|||||.|||||||||.||||||||||||||||||||||.|||||.
Sbjct 821 ACCGCTCTGGAGCCATGAAACAGTTCCTACAGAATGCCACACAGTTGCAGCTCTTCAAGCAGTTTATCGATGGC 894
Query 1111 CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC 1184
|||.||||.||||||||||||||.|||||||||||.|||||.|||||.|||||||||||||||||.|||||.||
Sbjct 895 CGACTAGACCTTCTCAATTCCGGTGAAGGTTTCAGCGATGTCTTTGAGGAGGAAATCAACATGGGAGAGTATGC 968
Query 1185 TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA 1258
.||||||||.||||||||||||||||||||.|||||.|||.|||||||||||||.||.||||||||||||||||
Sbjct 969 CGGCAGTGATAAACTGTACCATCAGTGGCTGTCCACAGTCAGGAAAGGAAGTGGTGCGATTCTGAATACTGTAA 1042
Query 1259 AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG 1332
|.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1043 AAACAAAAGCTAACCCAGCCATGAAGACTGTCTACAAGTTTGCAAAAGATCATGCAAAAATGGGAATAAAGGAG 1116
Query 1333 GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA 1406
|||||||||||||||||||||||||||||..|.|||||.|||||.|...||.|..|||||||.|..||||||||
Sbjct 1117 GTGAAAAACCGCTTGAAGCAAAAGGACATCACGGAGAACGGCTGTGTGTCCTCTGCAGAAGATCCACTGCCAAA 1190
Query 1407 GACTGCA--CCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCA 1478
||| || ||.|||||||.||..|||.||.|||||||||..||.||||||||||||.|.||||||||||||||
Sbjct 1191 GAC--CATGCCATCCCCACAGGCAGAGACCCAGGACCCCAGACTTCGAGAAGACCGGAGACCAATCACAGTCCA 1262
Query 1479 CTTTGGACAG---------------------------------------------------------GTGCGCC 1495
||||||.||| ||.||.|
Sbjct 1263 CTTTGGGCAGCAACAAAGACTTCATCCCACTCGGCCGCCGCCTCCCAAGATCCAGCGCTCAAGGCCCGTACGGC 1336
Query 1496 CACCTCGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGC 1569
|.||||||||||||||.||.|.||||||.||||||||||||.|.|||||||||.|||||||.|||||..|.|||
Sbjct 1337 CTCCTCGTCCACATGTCGTCAGGAGACCCAAGAGCAACATCACTGTGGAAGGCAGGAGGACATCTGTCTCAAGC 1410
Query 1570 CCTGAGCA------AAACACCATTGCAACACCA-GCT--------------ACACTCCAC--AT--------CC 1612
|||||||| ||| .||.||||.||||.| ||| |.|||||.| || ||
Sbjct 1411 CCTGAGCACCTGGTAAA-GCCCTTGCGACACTATGCTGTCTTCCTCTCTGAAGACTCCTCTGATGAGGAATGCC 1483
Query 1613 TAC----AGA-----------------------AAAGCATT-----------ACCCATTTTG--CGGCCA-AG- 1644
.|| ||| |||||.|| .||| |||| .||||| ||
Sbjct 1484 GACGGGAAGAGGCCCCCAGCACTGGCTTCACTGAAAGCCTTCTCTTCTCTGCTCCC--TTTGAATGGCCACAGC 1555
Query 1645 --TTCCCGA-------------------------------------CGAGAG---------GCT---------- 1660
|.||.|| |||||| |||
Sbjct 1556 CATACCGGACATTGAAAGAATCAGACAGCGCAGAAGGTGATGAGACCGAGAGTCCAGAGCAGCTAGTTCGAGAA 1629
Query 1661 ------GGACCT----CTTCATCACAT----------------------------------------------- 1677
|||||| ||.|..|||.|
Sbjct 1630 CCCTGGGGACCTACCCCTGCTCCACCTGACCGAGCTGCCAGCATTGACCTTCTAGAAGATGTCTTCAGCAGCCT 1703
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1704 AGACGTGGAGGCACCACTGCAGCCGCTGGGCCAAGCCAAGAGCCTGGAGGATCTCCGGGCCCCCAAAGACTTGC 1777
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1778 GGGAACAGCCAGGGAGCTTTGATTACCAGAGACTGGACCTGTGCAGAAGTGAGAGGGGCCTTAGCATGGCTGCA 1851
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1852 GCCTTGAAGCTTGCTCATCCATATACTAAGCTCTGGAGTCTGGGTCAGGACGACATGGCCATCCCCAGCAAGCC 1925
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1926 CTCCATAACCTCCCCTGAGAAGCCCTCAGCTCTGCTTGGTACTTCCCCAGCCCTGCCTCTCAGACCCCAGAACC 1999
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2000 AGGAGGGCATCCTGAGCCCCAGCATCAAGGAGGAGACTCCCATCCCAACTCCGGGCAGCATCACCATTCCCAGG 2073
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2074 CCACAAGGCAGAAAGACCCCTGAGCTGGGCATCGTGCCTCCACCACCCACTGCCCGGCCAGCCAAGCTCCAGGC 2147
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2148 TGCTGGCGGCCCACTTGGTGACTTCTCTTCAGAGCCACTGCAGATGGACCGGGAAAGACAAGCCGCTCTGAGTC 2221
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2222 CAGCCCTCCTGTCAGGGCTGCTCCCCAGAGCTGTCCCCCAAGGTCCCACAGAACTTCTGCAGCCACCCAGCCCA 2295
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2296 GCCCCAGGAGCTGCAGGCACAGGCAGCGATGCCCTGCTCGCTCTCCTGGATCCACTTAACACAGCCTGGTCAGG 2369
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2370 CAGCACCATCCCATCACATCCTGCTACCCCCAGTGCAGCCACCCCATTCATCCCTCAGCTCAGCTTCCCCCCAA 2443
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2444 CAGTGACACCCACCCCTTTTGTACAGACACCACTCAATCCCTTTGTCCCATCTGTGCCAGTAGTACCACCCTCC 2517
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2518 ATGCCCCTGAGCTCTACACCAGCCAGGCCTTTTGGGACCCCTCCAGCATCCCTAGGGCCAGCATATGCACCTAG 2591
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2592 CATTCTATTGTCTAGTTCTGGCTTCTATGCCCCTCACAGGTCTCAGCCCAACCTCTCTGCTCTCTCCATGCCCA 2665
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2666 ACCTCTTTGGCCAGATCCCAATGGGTGCCCACACTAGTCCCCTGCAGCCACTTGGCCCCCCAGCCGTTGCCCCC 2739
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2740 TCCAGGATCCGAACATTGCCTCTGGCCCGCTCAAGTGCCAGGGCTGCTGAGGCCAAGCAGGGGTTGGCCCTGAG 2813
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2814 GCCTGGTGAATCCCCACTGTTGCCTCCCAGACCGCCCCAGAGCCTACAGCCAACCCCGCAGCCCTCTGTTCCTA 2887
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2888 CACAGGCCAGAGACCCCTTTGAGGATTTGCTGCGAAAAACCAAGCAAGATGTGAGCCCAAGCCCAGCCCCGGCC 2961
Query 1678 --------------------------------------------------------- 1677
Sbjct 2962 CTGGCCCCAGCCTCCACCTCCGTGGAGCAGCTCCGCAGACAGTGGGAGACCTTTGAG 3018
