Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_03844
- Subject:
- XM_024447623.1
- Aligned Length:
- 3229
- Identities:
- 1049
- Gaps:
- 2159
Alignment
Query 1 ATGGGCTCCAGGATCAAGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGACAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGACTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTCGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTGTAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAAGAC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTCCAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCTGAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGATAC 592
||| ||| .|
Sbjct 1 ----------------------------------------------------ATG--GTA------------GC 8
Query 593 TCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC 666
||| || .|.|.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9 TCA-CA---CCTGTAATCTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATGTAC 78
Query 667 TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 79 TGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCTCAT 152
Query 741 AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 AGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGGACA 226
Query 815 CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 CCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAACAGG 300
Query 889 CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTTCGG 374
Query 963 TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 TAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCCACT 448
Query 1037 ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 449 ACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGATGGT 522
Query 1111 CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 523 CGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTACGC 596
Query 1185 TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTGTAA 670
Query 1259 AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 AGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAAGAG 744
Query 1333 GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 745 GTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCCAAA 818
Query 1407 GACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCACT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 GACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCCACT 892
Query 1481 TTGGACAG------------------------------------------------------GTGCGCCCACCT 1500
|||||||| ||||||||||||
Sbjct 893 TTGGACAGCTGCAGAGACTGCGTCCCACCCGACCGCCTCCCAAGATACAGCGCTCGAGGCCCGTGCGCCCACCT 966
Query 1501 CGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGCCCTGA 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 CGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGGAGGACGTCTGTGCCGAGCCCTGA 1040
Query 1575 GCA------AAACACCATTGCAACACCA-GC-----TACACTCC----ACATCCTACAGA-----AAAGCATTA 1627
||| ||| .||.||||.||||.| || |.|.|||| || |||| |.|| ||.|
Sbjct 1041 GCACCTGGTAAA-GCCCTTGCGACACTATGCGGTCTTCCTCTCCGAAGAC-TCCT-CTGATGATGAATG----- 1106
Query 1628 CCCATTTTGCGGCCA-AGTTCCCGA-------------CGAGAGGCTGGACCTCTTCATCAC------------ 1675
||| ||||..| ||..||||| |||||| |.|.|||.||.|
Sbjct 1107 -CCA----GCGGGAAGAGGGCCCGAGCTCTGGCTTCACCGAGAG------CTTTTTCTTCTCCGCTCCCTTTGA 1169
Query 1676 AT------------------------------------------------------------------------ 1677
||
Sbjct 1170 ATGGCCGCAGCCGTATCGGACACTCAGGGAGTCAGACAGCGCGGAAGGCGACGAGGCAGAGAGTCCAGAGCAGC 1243
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1244 AAGTGCGGAAGTCCACAGGCCCTGTCCCAGCTCCCCCTGACCGGGCTGCCAGCATCGACCTTCTGGAAGACGTC 1317
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1318 TTCAGCAACCTGGACATGGAGGCCGCACTGCAGCCACTGGGCCAGGCCAAGAGCTTAGAGGACCTTCGTGCCCC 1391
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1392 CAAAGACCTGAGGGAGCAGCCAGGGACCTTTGACTATCAGAGGCTGGATCTGGGCGGGAGTGAGAGGAGCCGCG 1465
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1466 GGGTGACAGTGGCCTTGAAGCTTACCCACCCGTACAACAAGCTCTGGAGCCTGGGCCAGGACGACATGGCCATC 1539
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1540 CCCAGCAAGCCCCCAGCTGCCTCCCCTGAGAAGCCCTCAGCCCTGCTCGGAAACTCCCTGGCCCTGCCTCGAAG 1613
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1614 GCCCCAGAACCGGGACAGCATCCTGAACCCCAGTGACAAGGAGGAGGTGCCCACCCCTACTCTGGGCAGCATCA 1687
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1688 CCATCCCCCGGCCCCAAGGCAGGAAGACCCCAGAGCTGGGCATCGTGCCTCCACCGCCCATTCCCCGCCCGGCC 1761
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1762 AAGCTCCAGGCTGCCGGCGCCGCACTTGGTGACGTCTCAGAGCGGCTGCAGACGGATCGGGACAGGCGAGCTGC 1835
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1836 CCTGAGTCCAGGGCTCCTGCCTGGTGTTGTCCCCCAAGGCCCCACTGAACTGCTCCAGCCGCTCAGCCCTGGCC 1909
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1910 CCGGGGCTGCAGGCACGAGCAGTGACGCCCTGCTCGCCCTCCTGGACCCGCTCAGCACAGCCTGGTCAGGCAGC 1983
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 1984 ACCCTCCCGTCACGCCCCGCCACCCCGAATGTAGCCACCCCATTCACCCCCCAATTCAGCTTCCCCCCTGCAGG 2057
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2058 GACACCCACCCCATTCCCACAGCCACCACTCAACCCCTTTGTCCCATCCATGCCAGCAGCCCCACCCACCCTGC 2131
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2132 CCCTGGTCTCCACACCAGCCGGGCCTTTCGGGGCCCCTCCAGCTTCCCTGGGGCCGGCTTTTGCGTCCGGCCTC 2205
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2206 CTGCTGTCCAGTGCTGGCTTCTGTGCCCCTCACAGGTCTCAGCCCAACCTCTCCGCCCTCTCCATGCCCAACCT 2279
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2280 CTTTGGCCAGATGCCCATGGGCACCCACACGAGCCCCCTACAGCCGCTGGGTCCCCCAGCAGTTGCCCCGTCGA 2353
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2354 GGATCCGAACGTTGCCCCTGGCCCGCTCAAGTGCCAGGGCTGCTGAGACCAAGCAGGGGCTGGCCCTGAGGCCT 2427
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2428 GGAGACCCCCCGCTTCTGCCTCCCAGGCCCCCTCAAGGCCTGGAGCCAACACTGCAGCCCTCTGCTCCTCAACA 2501
Query 1678 -------------------------------------------------------------------------- 1677
Sbjct 2502 GGCCAGAGACCCCTTTGAGGATTTGTTACAGAAAACCAAGCAAGACGTGAGCCCGAGTCCGGCCCTGGCCCCGG 2575
Query 1678 ----------------------------------------------- 1677
Sbjct 2576 CCCCAGACTCGGTGGAGCAGCTCAGGAAGCAGTGGGAGACCTTCGAG 2622
