Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03844
Subject:
XR_929830.3
Aligned Length:
2895
Identities:
1673
Gaps:
1218

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAACAGCTGAGATTACAGGGCGGCCCCCTCCCCGGGTTTACGGAGAGCCCCTGAAAATGGTCCTTCAACTGTGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAGGGGAGTGGGAAAGCCCCGGAAGCACCTCCCCATGTTTGGGCATGTTTGGGGCGCCCCTGAAAGTTGGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGTCCGGAGAGGTTGCAGCCTGGCCGCTTGAGGCCTGCGGCCCCCACAGAAGTCGCGTGAGGTTCTTAGAGGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGGCCGCTCATGGTGTGGCCACCTAAGGTGTGGATGGCCGGGGAGGAAGGCCTGTCTCTCTATTTCCCCCCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTATCTGTGAAAATCTCCACGCAGCAAGGTCCAAAGGCTGTGAAGGAGGATACCTCTGTGTTGTAACCGAGCAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGCTCTTGATAATCGTTGGAAAGGCTTTGTAACTCAATCTGGCGAATTCCCTCACTCATTCATTCACCTGGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCCGGTGGAGGGTTAGCTTTCCGGGGAAATTGTTGATACATGTAACTTCAGAATCCACTGAAACATTGTTGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGTCCTTGTAGACTTAGAAGTTGACTTTGGAAAGTGCAACTCTTAAGCGGTCCAATTTGGGTGTGTGGCTTTCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACTCTATCTCCCCTCCCAGCCAGGTCCTCTTGTGGCCTCTCCCTTCCTCTGCCCCAGAACTGGAGATGTTTTAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCTAATTACTAACAAATGTTCACTTTTTCCTCTGTGACTAATAGAATTGTTTAAGGGCATTAAAAAGCAAAGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGACAGCATAGGCTTTTCTGTAAAACAACTTTCCTAGGACACTTTAAACCCTCTTACAAGAAAGTTTGTGGAAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTGTTTATTTCAGCATTTTGAGAATTGTACTAGGGAAGTTTGAAAGGAGAAGGGCCTTAAGGGTGAAACTAATA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTATTCAAACATTGCATCTCATGTCCAGGTGATGCCCGTGCAGTGTGACCCTTGCCCAGCCTTGCAGTCCCCC  962

Query    1  -------------------------------------ATGGGCTCCAG----------------GATCAA----  17
                                                 |||.|||.|||                |.|.||    
Sbjct  963  GTGTGGTTAGGCTTCTCATTTACAAAATATGTATGAGATGCGCTGCAGCAGCCTTGAGACATCTGCTGAATGAA  1036

Query   18  --------------------GCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGAC  71
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACTAGAAAAGTTTGCTTATGGCAGAATCCAGAGACCACATTTGAAGTATATGTTGAAGTGGCCTATCCCAGGAC  1110

Query   72  AGGTGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGA  145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGGTGGCACTCTTTCAGATCCTGAGGTGCAGAGGCAATTCCCGGAGGACTACAGTGACCAGGAAGTTCTACAGA  1184

Query  146  CTTTGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTC  219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTTTGACCAAGTTTTGTTTCCCCTTCTATGTGGACAGCCTCACAGTTAGCCAAGTTGGCCAGAACTTCACATTC  1258

Query  220  GTGCTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTG  293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GTGCTCACTGACATTGACAGCAAACAGAGATTCGGGTTCTGCCGCTTATCTTCAGGAGCGAAGAGCTGCTTCTG  1332

Query  294  TATCTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAA  367
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TATCTTAAGCTATCTCCCCTGGTTCGAGGTATTTTATAAGCTGCTTAACATCCTGGCAGATTACACGACAAAAA  1406

Query  368  GACAGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTC  441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GACAGGAAAATCAGTGGAATGAGCTTCTTGAAACTCTGCACAAACTTCCCATCCCTGACCCAGGAGTGTCTGTC  1480

Query  442  CATCTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCT  515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CATCTCAGCGTGCATTCTTATTTTACTGTGCCTGATACCAGAGAACTTCCCAGCATACCTGAGAATAGAAATCT  1554

Query  516  GACAGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGA  589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GACAGAATATTTTGTGGCTGTGGATGTTAACAACATGTTGCATCTGTACGCCAGTATGCTGTACGAACGCCGGA  1628

Query  590  TACTCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATG  663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TACTCATCATTTGCAGCAAACTCAGCACTCTGACTGCCTGCATCCACGGGTCTGCGGCGATGCTCTACCCCATG  1702

Query  664  TACTGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCT  737
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TACTGGCAGCACGTGTACATCCCCGTGCTGCCGCCGCATCTGCTGGACTACTGCTGTGCTCCCATGCCCTACCT  1776

Query  738  CATAGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGG  811
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CATAGGAATCCATTTAAGTTTAATGGAGAAAGTCAGAAACATGGCCCTGGATGATGTCGTGATCCTGAATGTGG  1850

Query  812  ACACCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAAC  885
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ACACCAACACCCTGGAAACCCCCTTCGATGACCTCCAGAGCCTCCCAAACGACGTGATCTCTTCCCTGAAGAAC  1924

Query  886  AGGCTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTT  959
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AGGCTGAAAAAGGTCTCCACAACCACTGGGGATGGTGTGGCCAGAGCGTTCCTCAAGGCCCAGGCTGCTTTCTT  1998

Query  960  CGGTAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCC  1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CGGTAGCTACCGAAACGCTCTGAAAATCGAGCCGGAGGAGCCGATCACTTTCTGTGAGGAAGCCTTCGTGTCCC  2072

Query 1034  ACTACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGAT  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  ACTACCGCTCCGGAGCCATGAGGCAGTTCCTGCAGAACGCCACACAGCTGCAGCTCTTCAAGCAGTTTATTGAT  2146

Query 1108  GGTCGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTA  1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  GGTCGATTAGATCTTCTCAATTCCGGCGAAGGTTTCAGTGATGTTTTTGAAGAGGAAATCAACATGGGCGAGTA  2220

Query 1182  CGCTGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTG  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CGCTGGCAGTGACAAACTGTACCATCAGTGGCTCTCCACTGTCCGGAAAGGAAGTGGAGCAATTCTGAATACTG  2294

Query 1256  TAAAGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAA  1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TAAAGACCAAAGCAAATCCGGCCATGAAGACTGTCTACAAGTTCGCAAAAGATCATGCAAAAATGGGAATAAAA  2368

Query 1330  GAGGTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCC  1403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  GAGGTGAAAAACCGCTTGAAGCAAAAGGACATTGCCGAGAATGGCTGCGCCCCCACCCCAGAAGAGCAGCTGCC  2442

Query 1404  AAAGACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCC  1477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  AAAGACTGCACCGTCCCCACTGGTGGAGGCCAAGGACCCCAAGCTCCGAGAAGACCGGCGGCCAATCACAGTCC  2516

Query 1478  ACTTTGGACAGGTGCGCCCACCTCGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGG  1551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  ACTTTGGACAGGTGCGCCCACCTCGTCCACATGTTGTTAAGAGACCAAAGAGCAACATCGCAGTGGAAGGCCGG  2590

Query 1552  AGGACGTCTGTGCCGAGCCCTGAGCAAAACACCATTGCAACACCAGCTACACTCCACATCCTACAGAAAAGCAT  1625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  AGGACGTCTGTGCCGAGCCCTGAGCAAAACACCATTGCAACACCAGCTACACTCCACATCCTACAGAAAAGCAT  2664

Query 1626  TACCCATTTTGCGGCCAAGTTCCCGACGAGAGGCTGGACCTCTTCATCACAT----------------------  1677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 2665  TACCCATTTTGCGGCCAAGTTCCCGACGAGAGGCTGGACCTCTTCATCACATTGACTTACGCCGTTGCTTTTCC  2738

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2739  AGACTGGGCAGAGGGGCTGACTTCGCAGTGTGTGCCAAAGAGCCGGTGTCTGATAATCCCATTTTCCTGCTTAT  2812

Query 1678  --------------------------------------------------------------------------  1677
                                                                                      
Sbjct 2813  CACCTGAACTGTGCCGCAGCCGTATCGGACACTCAGGGAGTCAGACAGCGCGGAAGGCGACGAGGCAGAGAGTC  2886

Query 1678  ---------  1677
                     
Sbjct 2887  CAGAGCAGC  2895

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