Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04128
Subject:
NM_001077690.1
Aligned Length:
1854
Identities:
1833
Gaps:
21

Alignment

Query    1  ATGGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCCCGGCTGCGGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACGGCCCCGGCTGCGGA  74

Query   75  CAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTTATCTGGGAACAAAG  148

Query  149  CAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGTTATGTGCTGCTCTC  222

Query  223  CTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAACACACTACCTCATCTATGGGGAAGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAACACACTACCTCATCTATGGGGAAGG  296

Query  297  GTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCTTCATGCCTGGCCAG  370

Query  371  CTGCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTGCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGATGTCTTCTGGCTTTT  444

Query  445  GTGAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCACGTGAGTCGAATGAT  518

Query  519  GCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAGTAGCTTCTGTATGT  592

Query  593  ACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGGGAGTAGCAGCTGGG  666

Query  667  GCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTGGTCATGAAACACAG  740

Query  741  GTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAGCT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGTGGTCATTGACAGCT  814

Query  815  ACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTCCTCATGGACCTGAT  888

Query  889  CTTTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTGGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTTTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTAGCCTTTGCTTTGGC  962

Query  963  TCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCACC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCAGAATTTAGGCCACC  1036

Query 1037  CGTATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGAGA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CGTATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTCACAAAGAGGAGAGA  1110

Query 1111  TTTCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTTCAGCACAGTTTTCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1111  TTTCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTT--------------  1170

Query 1185  GTACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAATTGGC  1258
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171  -------CAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGTGACATCGAATTGGC  1237

Query 1259  TGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATCAC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238  TGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGTTCAGAGGATATCAC  1311

Query 1333  GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312  GGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACTGTCCCAGAAGGCAG  1385

Query 1407  ACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386  ACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCCTGACAATTGGCAGC  1459

Query 1481  TTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGATT  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460  TTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTCTGGCCACCCGGATT  1533

Query 1555  GTTCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGTAAATGCCATTATTT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1534  GTTCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGTAAATGCCATTATTT  1607

Query 1629  AGTGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGAAGAATGGATCAGCT  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608  AGTGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGAAGAATGGATCAGCT  1681

Query 1703  TGGCCTATAGACCATTCCTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCA  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682  TGGCCTATAGACCATTCCTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCATTCTATGTCCCCTTCCTGTCA  1755

Query 1777  GATCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGG  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756  GATCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATCAGGAAGAAAAGTGG  1829

Query 1851  AGGT  1854
            ||||
Sbjct 1830  AGGT  1833

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