Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04128
Subject:
XR_001747967.2
Aligned Length:
2502
Identities:
1852
Gaps:
648

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCGGCGGACACCGTTTGCCAGCCAAAGCTATGTCTGCGCGCTCACCGACTTCATAGGGTGCCGAATTCTTTTT  74

Query    1  --------------ATGGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACG  60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCCCCAGGCTTGCCATGGCTAGTCGAGGGGCTCGGCAGCGCCTGAAGGGCAGCGGGGCCAGCAGTGGGGATACG  148

Query   61  GCCCCGGCTGCGGACAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTT  134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCCCCGGCTGCGGACAAGCTGCGGGAGCTGCTGGGCAGCCGAGAGGCGGGCGGCGCGGAGCACCGGACCGAGTT  222

Query  135  ATCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGT  208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTGGGAACAAAGCAGGACAAGTCTGGGCACCTGAAGGATCTACTGCTTTCAAGTGTCTGCTTTCAGCAAGGT  296

Query  209  TATGTGCTGCTCTCCTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAACACACTACCTC  282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TATGTGCTGCTCTCCTGAGCAACATCTCTGACTGTGATGAAACATTCAACTACTGGGAGCCAACACACTACCTC  370

Query  283  ATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCT  356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATCTATGGGGAAGGGTTTCAGACTTGGGAATATTCCCCAGCATATGCCATTCGCTCCTATGCTTACCTGTTGCT  444

Query  357  TCATGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGAT  430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCATGCCTGGCCAGCTGCATTTCATGCAAGAATTCTACAAACTAATAAGATTCTTGTGTTTTACTTTTTGCGAT  518

Query  431  GTCTTCTGGCTTTTGTGAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCAC  504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GTCTTCTGGCTTTTGTGAGCTGTATTTGTGAACTTTACTTTTACAAGGCTGTGTGCAAGAAGTTTGGGTTGCAC  592

Query  505  GTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAG  578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGAGTCGAATGATGCTAGCCTTCTTGGTTCTCAGCACTGGCATGTTTTGCTCATCATCAGCATTCCTTCCTAG  666

Query  579  TAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGG  652
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TAGCTTCTGTATGTACACTACGTTGATAGCCATGACTGGATGGTATATGGACAAGACTTCCATTGCTGTGCTGG  740

Query  653  GAGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTG  726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAGTAGCAGCTGGGGCTATCTTAGGCTGGCCATTCAGTGCAGCTCTTGGTTTACCCATTGCCTTTGATTTGCTG  814

Query  727  GTCATGAAACACAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGT  800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTCATGAAACACAGGTGGAAGAGTTTCTTTCATTGGTCGCTGATGGCCCTCATACTATTTCTGGTGCCTGTGGT  888

Query  801  GGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTC  874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGTCATTGACAGCTACTATTATGGGAAGTTGGTGATTGCACCACTCAACATTGTTTTGTATAATGTCTTTACTC  962

Query  875  CTCATGGACCTGATCTTTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTA  948
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTCATGGACCTGATCTTTATGGTACAGAACCCTGGTATTTCTATTTAATTAATGGATTTCTGAATTTCAATGTA  1036

Query  949  GCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCA  1022
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCCTTTGCTTTGGCTCTCCTAGTCCTACCACTGACTTCTCTTATGGAATACCTGCTGCAGAGATTTCATGTTCA  1110

Query 1023  GAATTTAGGCCACCCGTATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTC  1096
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAATTTAGGCCACCCGTATTGGCTTACCTTGGCTCCAATGTATATTTGGTTTATAATTTTCTTCATCCAGCCTC  1184

Query 1097  ACAAAGAGGAGAGATTTCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTT  1170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ACAAAGAGGAGAGATTTCTTTTCCCTGTGTATCCACTTATATGTCTCTGTGGCGCTGTGGCTCTCTCTGCACTT  1258

Query 1171  CAGCACAGTTTTCTGTACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGT  1244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CAGCACAGTTTTCTGTACTTCCAGAAATGTTACCACTTTGTGTTTCAACGATATCGCCTGGAGCACTATACTGT  1332

Query 1245  GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGT  1318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GACATCGAATTGGCTGGCATTAGGAACTGTCTTCCTGTTTGGGCTCTTGTCATTTTCTCGCTCTGTGGCACTGT  1406

Query 1319  TCAGAGGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACT  1392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCAGAGGATATCACGGGCCCCTTGATTTGTATCCAGAATTTTACCGAATTGCTACAGACCCAACCATCCACACT  1480

Query 1393  GTCCCAGAAGGCAGACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCC  1466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GTCCCAGAAGGCAGACCTGTGAATGTCTGTGTGGGAAAAGAGTGGTATCGATTTCCCAGCAGCTTCCTTCTTCC  1554

Query 1467  TGACAATTGGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTC  1540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGACAATTGGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGTTACCAAAACCTTTTGCAGAAGGACCTC  1628

Query 1541  TGGCCACCCGGATTGTTCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGT  1614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TGGCCACCCGGATTGTTCCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATATTGATATCAGT  1702

Query 1615  AAATGCCATTATTTAGTGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGA  1688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AAATGCCATTATTTAGTGGATTTGGACACCATGAGAGAAACACCCCGGGAGCCAAAATATTCATCCAATAAAGA  1776

Query 1689  AGAATGGATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCATTCTATG  1762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AGAATGGATCAGCTTGGCCTATAGACCATTCCTTGATGCTTCTAGATCTTCAAAGCTGCTGCGGGCATTCTATG  1850

Query 1763  TCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATC  1836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TCCCCTTCCTGTCAGATCAGTATACAGTGTACGTAAACTACACCATCCTCAAACCCCGGAAAGCAAAGCAAATC  1924

Query 1837  AGGAAGAAAAGTGGAGGT--------------------------------------------------------  1854
            ||||||||||||||||..                                                        
Sbjct 1925  AGGAAGAAAAGTGGAGACCGGAGAAGAGCAGAACCAACTTACAGGAAGAATTGAAAATCCTGGTACTGGATGGC  1998

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 1999  TGTGATAAGCTGTTCTCCACACTCTGGCCTGGCATCTGAGAACTAGCAAGCCTCTCTTAGGCCATATGGGCTTC  2072

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2073  TCCACCAAAGCTGTTTGGCAGCTCCTAGCAGACCTTCTTATTGAAATCCTCATGCTGAAAATGAACACAGCCTA  2146

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2147  GTTGCCAACCCACATGTCCTTTTCACCTCCAGCAAGACTAAGCTTCTTTAAAGCACTTCACAGGACTAGGACCC  2220

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2221  TGTCCTGGAGCTATCTCAGGAAAAAGGTGATCTAGCTAACAGGTAGCTAGAGTTGAACACCACTGCTCTGGATA  2294

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2295  AAGACTGAGAGACTAACAATCACACCAAAAAATCAAAGGTAATTAAACAGGCAACATATTTGGTGTCCTTTTCT  2368

Query 1855  --------------------------------------------------------------------------  1854
                                                                                      
Sbjct 2369  AATTGTGACTCCTGGTTACCCAGGCCTTCATCTAGGCCTCTTCCCCACCACAGACCTATTTCTCTGTCTACTCC  2442

Query 1855  ------------------------------------------------------------  1854
                                                                        
Sbjct 2443  AGCCCATCAAACCTTACCTGCCCTCTCTCCCATTCCCTCTGGGCCCTGCTTTCTGGGAAA  2502

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