Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04156
Subject:
NM_024908.4
Aligned Length:
1878
Identities:
1686
Gaps:
192

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGGACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAAAATCAAAACATCGCTTATGTGTCTCTGAGACCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCT  148

Query    1  --------------------------------------------ATGTGCCCCAAATCCCTATCAGAAAAGAAT  30
                                                        ||||||||||||||||||||||||||||||
Sbjct  149  ATCTTGCCCCCTTTTCACTCAGTAATTACCAGCTAGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAAT  222

Query   31  TCTAACAATGAAGTGGCGTGTAAGAAGACTAAAATAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAA  104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCTAACAATGAAGTGGCGTGTAAGAAGACTAAAATAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAA  296

Query  105  AAACACATCTTCCAAGGCAGAATCCACGCTGCAAAATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTAC  178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAACACATCTTCCAAGGCAGAATCCACGCTGCAAAATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTAC  370

Query  179  AACCCAAGAGAACGGCAGATGCGATGAATCTCAGTGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAA  252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACCCAAGAGAACGGCAGATGCGATGAATCTCAGTGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAA  444

Query  253  GATACCACACCATCCCTGGATTTTTCGGGATTGTCACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAA  326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GATACCACACCATCCCTGGATTTTTCGGGATTGTCACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAA  518

Query  327  CGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAGTCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGC  400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAGTCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGC  592

Query  401  CTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGAAAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAA  474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGAAAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAA  666

Query  475  GTTGATCCTTCGGGAGTTTCATTACCAGCAGCTCCAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTT  548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTTGATCCTTCGGGAGTTTCATTACCAGCAGCTCCAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTT  740

Query  549  ACCTCCTGGGCCTTTAGAAATGACTTCTGAAAATCAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACA  622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCTCCTGGGCCTTTAGAAATGACTTCTGAAAATCAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACA  814

Query  623  CATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAACACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCC  696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAACACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCC  888

Query  697  AATTTAAATGGCATGGTCATTAGTGAAGATACCGTTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCT  770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AATTTAAATGGCATGGTCATTAGTGAAGATACCGTTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCT  962

Query  771  CCATCCATCAGAAACTAGAACTTTGGTAGCAGTTGGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCC  844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCATCCATCAGAAACTAGAACTTTGGTAGCAGTTGGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCC  1036

Query  845  AGCAACCTAAAGAAGATGGAGTTTATGTTTTTCATCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCC  918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGCAACCTAAAGAAGATGGAGTTTATGTTTTTCATCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCC  1110

Query  919  GCCAATCCGGCCCACATACTGTCACTGAGCTATGATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTT  992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GCCAATCCGGCCCACATACTGTCACTGAGCTATGATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTT  1184

Query  993  TGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTTTCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAA  1066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTTTCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAA  1258

Query 1067  TAGTAGGACACTGGGATGGAAATATGTCACTGGTGGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACC  1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TAGTAGGACACTGGGATGGAAATATGTCACTGGTGGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACC  1332

Query 1141  AGTTCTTCTATGGGAAAAATAAGAACTGTTCATGTCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATT  1214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AGTTCTTCTATGGGAAAAATAAGAACTGTTCATGTCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATT  1406

Query 1215  GAGGGATACTCATATTTATGATGCAAGGCGATTGAATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAAC  1288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GAGGGATACTCATATTTATGATGCAAGGCGATTGAATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAAC  1480

Query 1289  ATACAAAGAGCATTGCTTCCGCCTATTTTTCACCTCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGT  1362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATACAAAGAGCATTGCTTCCGCCTATTTTTCACCTCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGT  1554

Query 1363  AATCTGAGAATTTTTGACAGCAGCTGTATATCTTCTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTT  1436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AATCTGAGAATTTTTGACAGCAGCTGTATATCTTCTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTT  1628

Query 1437  CACTGGGCGATGGCTGACCAGGTTCCAAGCCATGTGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCA  1510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CACTGGGCGATGGCTGACCAGGTTCCAAGCCATGTGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCA  1702

Query 1511  TGGCCCATCCACGACGGGTAGAAATCTTCCATGAGACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTT  1584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGGCCCATCCACGACGGGTAGAAATCTTCCATGAGACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTT  1776

Query 1585  GTCTCTGTGTGTTCCATCAATGCCATGCACCCAACTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGAT  1658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GTCTCTGTGTGTTCCATCAATGCCATGCACCCAACTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGAT  1850

Query 1659  ACATGTTTTTATGAATGAAAAAAGCTGC  1686
            ||||||||||||||||||||||||||||
Sbjct 1851  ACATGTTTTTATGAATGAAAAAAGCTGC  1878

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