Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04457
- Subject:
- XR_001754425.1
- Aligned Length:
- 2352
- Identities:
- 1195
- Gaps:
- 1157
Alignment
Query 1 ---------------------------ATGAGTGACGGAAACCCAGAGCTCCTGTCAACCAGCCAGACCTACAA 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTTGATGGTGACAGTGCCTACGTGGGGATGAGTGACGGAAACCCAGAGCTCCTGTCAACCAGCCAGACCTACAA 74
Query 48 CGGCCAGAGCGAGAACAACGAAGACTATGAGATCCCCCCGATAACACCTCCCAACCTCCCGGAGCCATCCCTCC 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGCCAGAGCGAGAACAACGAAGACTATGAGATCCCCCCGATAACACCTCCCAACCTCCCGGAGCCATCCCTCC 148
Query 122 TGCACCTGGGGGACCACGAAGCCAGCTACCACTCGCTGTGCCACGGCCTCACCCCCAACGGTCTGCTCCCTGCC 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCACCTGGGGGACCACGAAGCCAGCTACCACTCGCTGTGCCACGGCCTCACCCCCAACGGTCTGCTCCCTGCC 222
Query 196 TACTCCTATCAGGCCATGGACCTCCCAGCCATCATGGTGTCCAACATGCTAGCACAGGACAGCCACCTGCTGTC 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TACTCCTATCAGGCCATGGACCTCCCAGCCATCATGGTGTCCAACATGCTAGCACAGGACAGCCACCTGCTGTC 296
Query 270 GGGCCAGCTGCCCACGATCCAGGAGATGGTCCACTCGGAAGTGGCTGCCTATGACTCGGGCCGGCCCGGGCCCC 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGCCAGCTGCCCACGATCCAGGAGATGGTCCACTCGGAAGTGGCTGCCTATGACTCGGGCCGGCCCGGGCCCC 370
Query 344 TGCTGGGTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGATGGGC 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCTGGGTCGCCCGGCAATGCTGGCCAGCCACATGAGTGCCCTCAGCCAGTCCCAGCTCATCTCGCAGATGGGC 444
Query 418 ATCCGGAGCAGCATCGCCCACAGCTCCCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCTCTCCCTCCAGCTC 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCCGGAGCAGCATCGCCCACAGCTCCCCATCACCGCCGGGGAGCAAGTCAGCGACCCCCTCTCCCTCCAGCTC 518
Query 492 CACTCAGGAAGAGGAGTCGGAAGTGCATTTCAAGATCTCGGGAGAAAAGAGACCTTCAGCCGACCCAGGAAAAA 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTCAGGAAGAGGAGTCGGAAGTGCATTTCAAGATCTCGGGAGAAAAGAGACCTTCAGCCGACCCAGGAAAAA 592
Query 566 AGGCCAAGAACCCGAAGAAGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGCCTGTGTCGGCCTACGCACTC 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGCCAAGAACCCGAAGAAGAAGAAAAAGAAGGACCCCAATGAGCCGCAGAAGCCTGTGTCGGCCTACGCACTC 666
Query 640 TTCTTCAGAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGTCCAAAATCGT 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCTTCAGAGACACTCAGGCCGCCATCAAGGGTCAGAACCCCAGTGCCACTTTCGGTGACGTGTCCAAAATCGT 740
Query 714 GGCCTCCATGTGGGACAGCCTGGGAGAGGAACAGAAGCAGGCCTACAAGAGGAAGACAGAAGCAGCAAAGAAGG 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCCTCCATGTGGGACAGCCTGGGAGAGGAACAGAAGCAGGCCTACAAGAGGAAGACAGAAGCAGCAAAGAAGG 814
Query 788 AATATCTGAAGGCCCTGGCAGCCTACCGGGCTAGCCTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAG 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AATATCTGAAGGCCCTGGCAGCCTACCGGGCTAGCCTCGTCTCCAAGAGCTCCCCAGATCAAGGTGAGACCAAG 888
Query 862 AGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTC 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCACTCAGGCAAACCCACCAGCCAAAATGCTCCCACCCAAGCAGCCCATGTATGCCATGCCAGGCCTGGCCTC 962
Query 936 CTTCCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGGGGCCTCCCCTGCCAGCCTCGCCCGGACGCTGGGCT 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTTCCTGACGCCGTCGGACCTGCAGGCCTTCCGCAGTGGGGCCTCCCCTGCCAGCCTCGCCCGGACGCTGGGCT 1036
Query 1010 CCAAGTCTCTGCTGCCAGGCCTCAGTGCGTCCCCGCCGCCGCCACCCTCCTTCCCGCTCAGCCCCACACTGCAC 1083
||||||||||||||||||||||||
Sbjct 1037 CCAAGTCTCTGCTGCCAGGCCTCA-------------------------------------------------- 1060
Query 1084 CAGCAGCTGTCACTGCCCCCTCACGCCCAGGGCGCCCTCCTCAGTCCACCTGTTAGCATGTCCCCAGCCCCCCA 1157
Sbjct 1061 -------------------------------------------------------------------------- 1060
Query 1158 GCCCCCTGTCCTGCCCACCCCCATGGCACTCCAGGTGCAGCTGGCGATGAGCCCCTCACCTCCAGGGCCACAGG 1231
|
Sbjct 1061 -------------------------------------------------------------------------G 1061
Query 1232 ACTTCCCGCACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAACCCCACCAGCAGC 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1062 ACTTCCCGCACATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAACCCCACCAGCAGC 1135
Query 1306 GGGGACTGGGACAGCAGCTACCCCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGCTCCCCAGGGACAAATC 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GGGGACTGGGACAGCAGCTACCCCAGTGGGGAGTGTGGCATCAGCACCTGCAGCCTGCTCCCCAGGGACAAATC 1209
Query 1380 GCTCTACCTCACC------------------------------------------------------------- 1392
|||||||||||||
Sbjct 1210 GCTCTACCTCACCTAATCCCGCCTCCCTACCATCCCTGAGGCTCGCTGGAAGGCACTGCTCAGAGCCTGAAGGG 1283
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1284 CTGACAGCAGAAAAGAGGCCCTGGCCAGAGGCAGGGTGGCCCATCGGAGAGAGCAGTGACACACCCATTGCCCG 1357
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1358 GGGGCTGAGTCTCTTCCTCAACCTCCCACCAGACTCTGCAGAGGCAGCCCACTGCCCACCACCAGCCCAAAGAA 1431
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1432 CCTGCAGGAACCTTCCGCCCGCTGACCTGCTTGCTCCAGGGTAACTGTGGACCCTGTCCTCGCCCTGCGCACGG 1505
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1506 TACCCTATGTCTGGACACCCGGCCCCAGCTCCAGCCCCAGCCCAGGTGGGCCGCCCCTGGCGGGGTCGCTTACC 1579
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1580 AACGGACACCCACCCCAGATGCATGGGCCAGAGGGCCGGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGTG 1653
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1654 TGAACAAAAGATTACGAAACCTAGAAACTGTTGGTTCCGTGTAAGTAGTTGACTACGTGTTTTAGAACTGTGCT 1727
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1728 GAAGACATCTGTAAGACTATTTTGTGGGGGAAAAAAGTAGTTTCCTTTAAGGTAAAAAGCATTTTATATGATCC 1801
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1802 TTAGCACATTTTTAAGTTTTATCTTAAGGGAGACGCGCACAAAAGCGGCTGCCAAACCGTTTCGTCATCCTCAC 1875
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1876 AGCAAGGACCGGACGCTTGCTAGCCACCCCGGAGCACTGCTCTCCTTTTAATCATGTATTCATCTATTTTAAAT 1949
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 1950 TGCCGGCGACGACTTTTGTCTATTTATGAAGAAACCTTGAGAACGAAGTTACAGCTTATCCTACCGTGTGTGTG 2023
Query 1393 -------------------------------------------------------------------------- 1392
Sbjct 2024 GTTTTGGGGTTTCGTTTGGGTTTGGGTTCTTGACGTCGTTTGCAGCTGTTTCCTGGCCCTGGCGAGTGTCTGTC 2097
Query 1393 ---------------------------------------------------------- 1392
Sbjct 2098 TTGGTGCCCAGTGCTTCTCTCAAATCTCTTTATAATAAAACTTCTGAAAAGCTGAAAA 2155
