Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04917
Subject:
NR_157409.2
Aligned Length:
3940
Identities:
418
Gaps:
3484

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTGACAGAAGCGTCAATTCCTGGGAGTAGTTCGTTGGTTTTCTTTCCCCTCATCCTTTTGCCTGCTCCCGGCG  74

Query    1  ----------------------ATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA  52
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGGGGTGGCTTTGATTTCGGCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACCTCAGAAGCACCAGA  148

Query   53  ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGAAAATTAATGCAAAACTTCATGAT  126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATACGTTTAGCTTCAAAAATGACAAGTTCGATAAAAGTGTGCAGACCAAGAAAATTAATGCAAAACTTCATGAT  222

Query  127  GGAGTATGTCAGCGCTGTAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACC  200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGAGTATGTCAGCGCTGTAAAGAAGTTCTTGAGTGGCGTGTAAAATACAGCAAATACAAACCATTATCAAAACC  296

Query  201  TAAAAAGTGTGTTAAATGTTTACAAAAGACAGTGAAGGATTCTTATCACATAATGTGCAGGCCATGTGCCTGTG  274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TAAAAAGTGTGTTAAATGTTTACAAAAGACAGTGAAGGATTCTTATCACATAATGTGCAGGCCATGTGCCTGTG  370

Query  275  AACTTGAAGTTTGCGCAAAATGTGGAAAGAAAGAAGACATTGTTATTCC--GTTGAATAAAGAAAC---AGAA-  342
            |||||||||||||||||||||||||||||||||||||||||||||||||  ||||      |||.|   |||| 
Sbjct  371  AACTTGAAGTTTGCGCAAAATGTGGAAAGAAAGAAGACATTGTTATTCCGAGTTG------GAAGCTTTAGAAG  438

Query  343  -------AAAATAGAACATACTGAAAATAATC-------TAAGTTCCAACC---ATAGAAGA------------  387
                   ||...||.|...||||       ||       |.||..||.|||   ||.||.||            
Sbjct  439  GAGTTTCAACTCAGGAGTCACTG-------TCCCTTGAGTGAGACCCCACCTGTATGGAGGAGCTGGTGATTCT  505

Query  388  --AGCTGCAGAAGAAATGAAGAA------------------------AGTGATG----ATGATTTAGATT----  427
              |.|||||....|.||.|.|.|                        ||||..|    |.|||.|.|..|    
Sbjct  506  ATATCTGCACTTAACATTATGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCAGGATCTTGGCTCACC  579

Query  428  ----------------TTGAT--ATTGATT---------------------TAG--AAGAC-ACAGGAGGAGAC  459
                            |||.|  |.|||||                     |||  ..||| |||||.|.|.||
Sbjct  580  ACAACCTCCGCCTCCCTTGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGACTACAGGCGCACAC  653

Query  460  CATCAAATG-------AAT-------------------------------------------------------  471
            ||.|  |||       |||                                                       
Sbjct  654  CACC--ATGCCCAGCTAATCTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCCGGTCTCGAA  725

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  726  CTCCTGACCTCATGATCTGCCTGCCTCAACCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCATCATGCCTGGC  799

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  800  CTAATTTGTATATTTCTAATGACTCATGATGTTGACTGAGCATCTTTTCTTTTCTTTTCTTTTTTTTTTTCCTT  873

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  874  GTTTTTTGAGATGGAGTCTTGCTCTATAGCCCGGGCTGGAGTGCAGTGGCACCATTTCAGCTCAATGCAACCTC  947

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct  948  TGCCTCCTAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACACACCACCATGC  1021

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1022  CCAGCTAATTTTTGTATTTTTAGTAGAAACAGGTTTTCACAATGTTGGCCAGGATGGTCTCCATCTACTGACCT  1095

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1096  TGTGATCCGCCCCCCTAGGCCTCCCAAAGTGCTGGGCTTACAGGCATGAGCCACTGCACCCAGCCGACTGAACA  1169

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1170  TCTTTTCATGTGTTTATTAGCCAATCCTATATCTTCACTGGTGAAATGTCTATTCAGATGTGTTGCCCATTTTA  1243

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1244  AAAATTGGGTTGTTTTCTTACCATTGAGTTATGAGTCTTTTATATATATTCTAGATACAAGTCCTTTATCAGAT  1317

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1318  ATAATTTGGAAATATTTTCTCGCTGTCTGTAATGTGTTATACATCAATTTTGAGATATCCTTCACATTAAGAAA  1391

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1392  CTAACGGTGTGGATAATAATCCTGGTATTGACAGAGGTTTGGACTCCTGAAGCCTGAAAGTCTATCTGCTGCCA  1465

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1466  CGCCTGGGCACATACTGCATCATTTACAAAACTGTAGAGCACCTGTTGTGTGTGCAGTTGTGATTTCTTATAGA  1539

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1540  TTTTTAGAATTGGAAGGCATGTAAAGAACACGTAATCTGGTACATTGCTTCAGTAGGTAAGTCAGTATGAACTT  1613

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1614  CTAAGAATTTTTGTTTTCTTCTGTATTGGGTCTATTGTGGGTATGTCCAACGTGACAGGGGAGGTAAGGGAAGT  1687

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1688  GGCATCCCCTGAGATAGTGACTGAAATGGCTTTCATCATCTTTAAGTCAAAGTGAGATGCCAGTAATAGGATAT  1761

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1762  ATGTATGTATGTACTTGTGTCTCTGTATGTATGTAAATAAACAAACATGCTGGAAGGAGGAGGTGATTCAATCA  1835

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1836  GGGACTTTGTGAAAGAAAAAAAGAATAACTGGACCTTCCTTTAATGATGAAAACTGTTTATACAGCAAACCATC  1909

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1910  AAAGCCAAAATGTGAATTTTGGTATTAGCCCGATTTTTCCTAAGAAACTGTTGATGTAACCACTGTAGTTGCAG  1983

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 1984  AGATCGTTTTGGTATATTCTAGACCCTCTTTGTTTTGTTCTGTTTGGGGTTTCTTCCCCCTCAAGTTGCTCTTG  2057

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2058  TCCACCACTAGACTGGCTGCCTTTTATTCCATAGCAGACAGTCCTTAAGTCTTTGCATATGTCCTTATTCAAAA  2131

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2132  ATTAATCTTCATCAGTTTTTTTCTGCAGAAAACAGTTTTTTAAATATCTTACATGAGAATGCTCTGCACCTGCA  2205

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2206  ATCTCTGGTTGATGCAGTTTCCTTTCTCTCTTCTCTGTTCCCATTGGTAGAATAAATCTGCTCCTTCTTAAATC  2279

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2280  CTGAGCTGAAAATGTCCACACTTCCCAGAAGTGTACTTTAGAATCACCTGTAACATGTATTTAAAATACAGATT  2353

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2354  CCCCAGCTCCACGGGCAAAGCTCTCCTGCCATGTGACACCCTGATACAGTTCAGGGAGCCACTAAGGCAGGCCA  2427

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2428  AAATGGCTCAGCAGGCAAAGGTCCAAGCTGCCAGGGTAGTGTGTCATTACAGCATGCTTAGCATAGCTAGGAGG  2501

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2502  ACAGGCTCACACCCAGCCCCACAGCTGTTGCGCTACAGACTCAGGCACAGGGCTGTCTAACTGGCAGATGTGGG  2575

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2576  CCACAACTGTTGGAGACAAGCCAGCCATATTTGGGAAAATCTTATTGTAAGGGGCAAGTGTGAGTGAGATTTAG  2649

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2650  GAGTCATGGGAAAATACACCAACACAGTAAATCTTGTGTTATAGGAGAGATGTGGAAGAAAGAGATAAACTACT  2723

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2724  GGCCAGGGTGTCTCCTGACTGGGTGACTTGCCACCACATGGGCCAGGCAGGTTGCGGCAGCTCTGCCTTTGGGA  2797

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2798  GGTGGCTGGAGGAGGGGAGGAGAGAGAGGCATGATGAAGACAGATGCACCCTTTCCTGAGCAGGGGTTAACATT  2871

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2872  CAGGGTGCCGAAAGGAATTCCACAGCCTGTTTCCCATCTCTCTTGTCCTCATCAAGTACTGGTCCTCGTGTATG  2945

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 2946  TGTTCTGCTTCCGCTTTCTCAGGATGTTTACGTTTTTGCAAATACGTTTATGGAAAAGAGTTACCTCACCCACC  3019

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3020  TCTCCAAACATCTATTTGTTTTACATTTTTATTGCGGGGGAGTGATCTCTTTACATAGCTTCAAATGGCATAAC  3093

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3094  ATTCAGCAGTATCCAAGCTTAGATATATCTGATGAGAGGAAAGTAATTGTGAGGCCTTTGTTCTAGTTACAACT  3167

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3168  TTGTCACTATCTGACTCCATGACTCCAGCAAATTGCTTCAACTGTCTGGCCTGCAGTTTTTTTCTTGCGTTAAA  3241

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3242  TAACAGACTTAGTCTAGATCGGTGGTTCTTATCATGTGGTTTCTGGACTAGCAGCATCAATATTACCTGGGAAA  3315

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3316  CTTGTTAGAAATGCAAATTCTTGGGCTCTGCCCTAGACCTACTGAAACATACTCTGTGGGCGGGGCCCAGCAAT  3389

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3390  CTGTGTTTGAAACGCGATTCTGATTATTTGACAAAAGTTTGCAAACCACTGGTCTAGATAAGTAGCTCTTAGCC  3463

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3464  TTGGCTGCACATTAAAATCATCTGGGCAACTTTTATAACCTACCAATCCTGGCCTCTTCCTCCAAAGATTCTGA  3537

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3538  CTTAAATGGTTTCAGATGGGGACCATTGTTATGCGGTTATAGCCGACGCCTAGGTGCTACCTGAGGTCTTCAAA  3611

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3612  GCTAAAGGTCAGTGTTTCCCAGCCGTAAATGCATACCTCTAGACCTGGCCTTCTCAAGCCACTAGGTGTTGCTA  3685

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3686  TAATAGAGAAGAAAAGGCATTTTCAGAACCGTCTTTGGATATGGATGAGGAGGAGGAAAATGTATTTCTTAGCT  3759

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3760  TCTGATAAGAGATTATTTTGTTATTTTAATCTGAGTGCAATTTGCTAAATATTCATTTGCAACTTGTTAAATTT  3833

Query  472  --------------------------------------------------------------------------  471
                                                                                      
Sbjct 3834  ATTCAAAGAAATTAAATGCCCATAAGTGACAGAAAGAATAAAGAATTGTGATATATATTTACAATAAAATACTC  3907

Query  472  ------------------  471
                              
Sbjct 3908  TTTAGCAATAAAAAGAAA  3925

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