Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05013
Subject:
XM_011509213.3
Aligned Length:
1312
Identities:
1181
Gaps:
116

Alignment

Query    1  ATGACCCATTGGTTTCATAGGAACCCATTAAAAGCCACAG-----CTCCTGTGTCTTTTAATTACTATGGTGTA  69
            |||.|...||||                  ||||    ||     |||..||||             |||.| .
Sbjct    1  ATGCCTGTTTGG------------------AAAG----AGGGGAACTCAAGTGT-------------TGGCG-C  38

Query   70  GT---CACTG-----GCCCTTCTGCTTCAAA-------------------AATATG------------------  98
            ||   |||.|     |||| .||||.||.||                   ||.|.|                  
Sbjct   39  GTGCGCACGGTCGCCGCCC-GCTGCCTCGAACGGGACTGGGCACGGGAGGAAGAGGCTGGGTGGTAAACAGGAA  111

Query   99  -----------------------------CAATGACTTGAGGTCATCCAGGGCACGACTCCTTGAACTGTTCAC  143
                                         ||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  112  GTGGGCGCTCAGAGCTCGGGGGCGGCGCTCAGTGACTTGAGGTCATCCAGGGCACGACTCCTTGAACTGTTCAC  185

Query  144  TGATTTGAGCTGTAATCCAGAAATGATGAAGAATGCAGCAGATTCATATTTCTCACTTTTACAAGGTTTCATAA  217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  186  TGATTTGAGCTGTAATCCAGAAATGATGAAGAATGCAGCAGATTCATATTTCTCACTTTTACAAGGTTTCATAA  259

Query  218  ATTCTTTGGATGAATCTACCCAAGAAAGCAAGTTACGATATATTCAAAATTTCAAGTGGACTGATACATTGCAA  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  260  ATTCTTTGGATGAATCTACCCAAGAAAGCAAGTTACGATATATTCAAAATTTCAAGTGGACTGATACATTGCAA  333

Query  292  GGACAGGTTCCAAGTGCCCAGCAGGATGCTGTTTTTGAATTAATTTCCATGGGATTTAATGTAGCTTTATGGTA  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  334  GGACAGGTTCCAAGTGCCCAGCAGGATGCTGTTTTTGAATTAATTTCCATGGGATTTAATGTAGCTTTATGGTA  407

Query  366  TACCAAATATGCTTCAAGACTGGCTGGAAAAGAAAATATAACAGAAGATGAAGCAAAAGAAGTTCATCGAAGCC  439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  408  TACCAAATATGCTTCAAGACTGGCTGGAAAAGAAAATATAACAGAAGATGAAGCAAAAGAAGTTCATCGAAGCC  481

Query  440  TAAAGATTGCAGCTGGGATTTTTAAACATTTAAAGGAAAGTCATCTCCCAAAACTCATTACACCTGCGGAAAAA  513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  482  TAAAGATTGCAGCTGGGATTTTTAAACATTTAAAGGAAAGTCATCTCCCAAAACTCATTACACCTGCGGAAAAA  555

Query  514  GGAAGAGATTTAGAGTCACGACTCATAGAAGCATACGTTATTCAATGTCAGGCTGAAGCTCAAGAAGTAACAAT  587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  556  GGAAGAGATTTAGAGTCACGACTCATAGAAGCATACGTTATTCAATGTCAGGCTGAAGCTCAAGAAGTAACAAT  629

Query  588  TGCTCGAGCAATTGAACTAAAACATGCTCCTGGACTAATTGCTGCACTGGCGTATGAAACAGCCAATTTCTATC  661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  630  TGCTCGAGCAATTGAACTAAAACATGCTCCTGGACTAATTGCTGCACTGGCGTATGAAACAGCCAATTTCTATC  703

Query  662  AAAAAGCTGATCATACTTTATCCAGTTTGGAGCCTGCATATTCTGCCAAATGGAGAAAATATCTTCACTTGAAG  735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  704  AAAAAGCTGATCATACTTTATCCAGTTTGGAGCCTGCATATTCTGCCAAATGGAGAAAATATCTTCACTTGAAG  777

Query  736  ATGTGTTTCTACACAGCTTATGCTTACTGTTACCATGGTGAGACTTTATTGGCTAGTGATAAATGCGGTGAAGC  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  778  ATGTGTTTCTACACAGCTTATGCTTACTGTTACCATGGTGAGACTTTATTGGCTAGTGATAAATGCGGTGAAGC  851

Query  810  AATCAGGTCTCTCCAAGAAGCAGAAAAATTGTATGCAAAGGCAGAAGCACTGTGTAAAGAATATGGAGAAACCA  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  852  AATCAGGTCTCTCCAAGAAGCAGAAAAATTGTATGCAAAGGCAGAAGCACTGTGTAAAGAATATGGAGAAACCA  925

Query  884  AAGGACCTGGACCAACAGTCAAACCTTCAGGACATCTGTTCTTTAGGAAACTTGGAAACCTTGTGAAGAACACC  957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  926  AAGGACCTGGACCAACAGTCAAACCTTCAGGACATCTGTTCTTTAGGAAACTTGGAAACCTTGTGAAGAACACC  999

Query  958  CTAGAAAAATGTCAGAGAGAAAATGGATTTATTTACTTTCAAAAAATTCCAACAGAAGCCCCACAGCTGGAACT  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000  CTAGAAAAATGTCAGAGAGAAAATGGATTTATTTACTTTCAAAAAATTCCAACAGAAGCCCCACAGCTGGAACT  1073

Query 1032  CAAAGCAAATTATGGTCTCGTAGAGCCTATACCTTTCGAATTTCCTCCTACAAGTGTTCAGTGGACACCAGAAA  1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074  CAAAGCAAATTATGGTCTCGTAGAGCCTATACCTTTCGAATTTCCTCCTACAAGTGTTCAGTGGACACCAGAAA  1147

Query 1106  CATTGGCTGCATTTGATCTCACCAAAAGACCCAAGGATGACAGTACTAAACCCAAACCAGAAGAAGAAGTGAAA  1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148  CATTGGCTGCATTTGATCTCACCAAAAGACCCAAGGATGACAGTACTAAACCCAAACCAGAAGAAGAAGTGAAA  1221

Query 1180  CCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCC  1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222  CCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTCC  1275

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