Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05013
Subject:
XR_389720.3
Aligned Length:
3431
Identities:
1044
Gaps:
2214

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCGGCGCCTTCCTTGTCTCGCTGGAGGACTCCGTCCCACCTTCCCTTTCCTTCAGCAGGAAGAGTGGCCTTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGACTCTGAGGTCCCCGCCATCCAACCAGAGTCTCAGCTTTGCTTTGCAGAAGTCTAATCTGGAAGCCCTGCAG  148

Query    1  -----------------------------------------------ATGACCCATTGGTTTCATAGGAACCCA  27
                                                           |||||||||||||||||||||||||||
Sbjct  149  TGTCAGCACCTCAGGCTTCTCCCACAGACTGAGCACATTTTGTGAAGATGACCCATTGGTTTCATAGGAACCCA  222

Query   28  TTAAAAGCCACAGCTCCTGTGTCTTTTAATTACTATGGTGTAGTCACTGGCCCTTCTGCTTCAAAAATATGCAA  101
            ||||||||.||||||||.|||||||||||.||||||||..|..|||||||.|||.|.||||||||.||.|||||
Sbjct  223  TTAAAAGCTACAGCTCCCGTGTCTTTTAACTACTATGGCATGATCACTGGTCCTCCCGCTTCAAAGATTTGCAA  296

Query  102  TGACTTGAGGTCATCCAGGGCACGACTCCTTGAACTGTTCACTGATTTGAGCTGTAATCCAGAAATGATGAAGA  175
            ||||||||||||..|||||.|.||.|||||.||..||||||||||||||||||||||||||||||..|||||||
Sbjct  297  TGACTTGAGGTCCGCCAGGACTCGGCTCCTCGAGTTGTTCACTGATTTGAGCTGTAATCCAGAAACAATGAAGA  370

Query  176  ATGCAGCAGATTCATATTTCTCACTTTTACAAGGTTTCATAAATTCTTTGGATGAATCTACCCAAGAAAGCAAG  249
            ||||.|||||.|..||||||||.|||||||||||||||||||||||..|||.|||.|||||.||.||||||||.
Sbjct  371  ATGCGGCAGACTTGTATTTCTCTCTTTTACAAGGTTTCATAAATTCAGTGGGTGACTCTACACAGGAAAGCAAA  444

Query  250  TTACGATATATTCAAAATTTCAAGTGGACTGATACATTGCAAGGACAGGTTCCAAGTGCCCAGCAGGATGCTGT  323
            ||||||||.|||||.||||||||||||||.|||||||||||||||||.|||||.||||||||||||||||||||
Sbjct  445  TTACGATACATTCAGAATTTCAAGTGGACCGATACATTGCAAGGACACGTTCCGAGTGCCCAGCAGGATGCTGT  518

Query  324  TTTTGAATTAATTTCCATGGGATTTAATGTAGCTTTATGGTATACCAAATATGCTTCAAGACTGGCTGGAAAAG  397
            |||||||.|.|||||||||||||||||||||||..|.|||||.||.|||||||||||||||.||||||||||||
Sbjct  519  TTTTGAACTGATTTCCATGGGATTTAATGTAGCGCTGTGGTACACAAAATATGCTTCAAGATTGGCTGGAAAAG  592

Query  398  AAAATATAACAGAAGATGAAGCAAAAGAAGTTCATCGAAGCCTAAAGATTGCAGCTGGGATTTTTAAACATTTA  471
            ||||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||
Sbjct  593  AAAACATAACAGAAGATGAAGCAAAAGAAGTTCACCGAAGCCTAAAAATTGCAGCTGGGATTTTTAAACATTTA  666

Query  472  AAGGAAAGTCATCTCCCAAAACTCATTACACCTGCGGAAAAAGGAAGAGATTTAGAGTCACGACTCATAGAAGC  545
            ||||||||||||.||||.|||||..|||||||.||.|||||.||..|.||.||.|||.|.||.|||||.||.||
Sbjct  667  AAGGAAAGTCATATCCCCAAACTTCTTACACCAGCAGAAAAGGGGCGGGACTTGGAGGCTCGGCTCATCGATGC  740

Query  546  ATACGTTATTCAATGTCAGGCTGAAGCTCAAGAAGTAACAATTGCTCGAGCAATTGAACTAAAACATGCTCCTG  619
            .|||.|.||.||.||.|||||.||.|||||.|||||.|||||.||.|||||.|||||.||.||.||.|||||.|
Sbjct  741  TTACATCATCCAGTGCCAGGCCGAGGCTCAGGAAGTGACAATCGCCCGAGCCATTGAGCTGAAGCACGCTCCGG  814

Query  620  GACTAATTGCTGCACTGGCGTATGAAACAGCCAATTTCTATCAAAAAGCTGATCATACTTTATCCAGTTTGGAG  693
            ||||.||.||||||||.||.|||||.|||||||..|||||.||.||||                ||||||||||
Sbjct  815  GACTGATCGCTGCACTCGCCTATGACACAGCCAGCTTCTACCAGAAAG----------------CAGTTTGGAG  872

Query  694  CCTGCATATTCTGCCAAATGGAGAAAATATCTTCACTTGAAGATGTGTTTCTACACAGCTTATGCTTACTGTTA  767
            ||||||.|.|||||.|||||||||||.||.|||||||||||||||||.|||||||||||.|||||.||.||.||
Sbjct  873  CCTGCACACTCTGCTAAATGGAGAAAGTACCTTCACTTGAAGATGTGCTTCTACACAGCGTATGCGTATTGCTA  946

Query  768  CCATGGTGAGACTTTATTGGCTAGTGATAAATGCGGTGAAGCAATCAGGTCTCTCCAAGAAGCAGAAAAATTGT  841
            ||||||..|||||.|.|||||.||.|||||.||.||.|||||.|||.|.|||||||||||||||||||||||||
Sbjct  947  CCATGGCCAGACTCTGTTGGCGAGCGATAAGTGTGGAGAAGCCATCCGATCTCTCCAAGAAGCAGAAAAATTGT  1020

Query  842  ATGCAAAGGCAGAAGCACTGTGTAAAGAATATGGAGAAACCAAAGGACCTGGACCAACAGTCAAACCTTCAGGA  915
            |.|||.||||||||||.||.||.|||||.||.||.||||||||||||||.||.||.||.|.|||.||.||||||
Sbjct 1021  ACGCAGAGGCAGAAGCCCTATGCAAAGAGTACGGGGAAACCAAAGGACCAGGGCCGACGGCCAAGCCGTCAGGA  1094

Query  916  CATCTGTTCTTTAGGAAACTTGGAAACCTTGTGAAGAACACCCTAGAAAAATGTCAGAGAGAAAATGGATTTAT  989
            ||..|||||||..||||.|||||.|.||||||||||||||||||.||.||||||||||||||||||||.||.||
Sbjct 1095  CACTTGTTCTTCCGGAAGCTTGGGAGCCTTGTGAAGAACACCCTGGACAAATGTCAGAGAGAAAATGGCTTCAT  1168

Query  990  TTACTTTCAAAAAATTCCAACAGAAGCCCCACAGCTGGAACTCAAAGCAAATTATGGTCTCGTAGAGCCTATAC  1063
            |||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||.|||||||||.|.|
Sbjct 1169  TTACTTTCAAAAAATTCCAACAGAAGCCCCACAACTGGAACTCAAAGCAAATTATGGGCTGGTAGAGCCTGTGC  1242

Query 1064  CTTTCGAATTTCCTCCTACAAGTGTTCAGTGGACACCAGAAACATTGGCTGCATTTGATCTCACCAAAAGACCC  1137
            ||||.|||||.|||||||..||||.|||.||||||||.|||.|.||||||||.||||||||||||||.||||||
Sbjct 1243  CTTTTGAATTCCCTCCTATGAGTGCTCACTGGACACCGGAAGCGTTGGCTGCGTTTGATCTCACCAAGAGACCC  1316

Query 1138  AAGGATGACAGTACTAAACCCAAACCAGAAGAAGAAGTGAAACCTGTGAAAGAACCAGACATCAAACCTCAAAA  1211
            ||||||||||||...|||||||||||.|||||.||.|||||||||||.||.||||||||.||||.||||||.||
Sbjct 1317  AAGGATGACAGTGTCAAACCCAAACCGGAAGAGGACGTGAAACCTGTAAAGGAACCAGATATCAGACCTCAGAA  1390

Query 1212  GGACACTGGGTGCTACATCTCC----------------------------------------------------  1233
            ||||||||||||||...||||.                                                    
Sbjct 1391  GGACACTGGGTGCTCGGTCTCATAAGAATGTCTGTCACTCACTGCAATCTCTGCTGGTCCACAAGAGAAACTGT  1464

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1465  GGGGCTTCAGTTCGCCGTTTCTGATTTCTCTGAAGCCCACAGGATAATTGTTAGCTTCAGAGCAACTTGGCCTT  1538

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1539  TCATTTATTTATTCTTGATTTTTAACATAGAGGCATTTCATGATTTTGCTTCTGGGCTCTGCTTTTTTAATCAG  1612

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1613  GACAACATTTGGAAGGGTTGTTTTTTATGCCTCTAATGAGTATATGTGGGGGATTGGACCTTTTCTGAACTCTA  1686

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1687  GATAGTAAGTTTCATGTTCATGTTTTTCTACTTTCACAGAAATGTTTGTTCTTCTTGTTTGATACCAGAAGGAT  1760

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1761  GTTTTGAAAAGAGATGGGTTCACCTTTCATCACCACATTGTCAGATCCGAGTCTAGCTTAGTCTAGGTGGGGAA  1834

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1835  ACAGAATCGCAGTTAAAATCAGAAAACCTCAGACCAAGCTCTTTCCCTGTACTAGGAAATCGTGTCTTCAGGAA  1908

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1909  TATGGAAGTTACGTGAAATTCAGCAGTCTGGGTCTGTGCCCCTCGGCCTGGCTCAGCAGCGGAGGGCCGTGCTC  1982

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 1983  TCTCCACCCGCACTACCCACACAGTGGTGGTTTTCTTACAAGTACCTTTTCTAATGAACTTTTTACTTAAGGGG  2056

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2057  TAAAGCTTTGTACTAGCATTTAGTGCTTCTGTGTAGAGAGAGGAAGAGAATGGTAGTGTGTTTTGAAGAATTAA  2130

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2131  AATGTTGCATGTTGTAAAGAAAGCCTTCGTAAACTCAACCAAGATAGGTTGTCCTGACTCACACTGGTAATTCC  2204

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2205  TTTGTTAGAAGAGTTTTAAGAAAATGCCTTTGTTCCCTGATTTTGGTGGACACTGTGTTTTTAACATGGTTTTC  2278

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2279  TTCAGTATCCTATAGTAATGGCTTGGCGTTAGGCCATAGTGACAGAGGTTAGGATATAGACACACAAACTATGT  2352

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2353  GTTTAAAGGATTTGCTTATACCCACACACTGGGAATGATGGGTGTGTGATACTTTACCAAGTAACAGATGTGGG  2426

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2427  TGTATCCTGCTTGGTTGCTCTCCTGGGGTGTTAACTTCCTTTTCTAGGTGACAGATTGCTTCGCATAATAGGAA  2500

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2501  TAATAATGTATGTGAGAACTTACTGTGTGCCAGACAGTGTATAGGCACATACGTAGACCACTGCATCCCTTTAG  2574

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2575  CCACCCTGTGAGAAACACATCAATCTGCATAAAGTATTGAAACAGGAATATACATCTCATGATGAAGAATGAAG  2648

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2649  AGATTATACCTGTCAATCAAGACAGTAGTCAATAAATCATATATCATAGTTTATACTCCTTTGAAAAGCTACAT  2722

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2723  ATAATCACTAAGGGTTTTTTAAAAAATAATTTAAAATGTGAGTTACAGCTTGCAGTATCTAATATTTAAGCTGT  2796

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2797  AGCTTTCAGAATACTTGGAGTAACTACTGAATGGGCATTAAGTTTTATTTTGCTGCCTATAGGAAAACAATACT  2870

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2871  TTATTACGTTGTCACCCTTCCTACAGAGTCACTTGTTAAATGCCAGTGACTGACAAAACTAACTAGTTACTGAC  2944

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 2945  AAAACTAACTAGTACTTGCTGCTGCCTGTTTATACTCTGCCTGTAGGACTTGCTCTGTGTACTAACCCTCATTA  3018

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 3019  ACCTAGGTAGGCACGCTGCGGTTTCTGTGGACTCGACTGCCGTTCATGAAATGGAAACACATACTATGTCCGGC  3092

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 3093  GCTTCTGTAAAGGCAGTAAATGCAGGTGTTGAAATCCATCATTGGCCATGTTCACGTGATCGCATGAGCAGTCT  3166

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 3167  TGTTGATTGTAAAGCTAACACCAGAAGCCTCGTATACGCCGGGCGCACCATGAGGTTCCGAAGCAGTAGCAGGG  3240

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 3241  ATTGTGGGGACGCTGACTATAAAGCACTGGCAGGCAGGCTGTGCAGAGATGACACTGGACATTGGTGTTGCATG  3314

Query 1234  --------------------------------------------------------------------------  1233
                                                                                      
Sbjct 3315  TGTTTCATACCAGGCGAGGACAGCTCCTGTACAGCTACTTCTGTACAGTGTTTATATGATTTATCTTTTTATTT  3388

Query 1234  ---------------------------  1233
                                       
Sbjct 3389  ATGAAAATAAAAGCCATTTTACTTACA  3415

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