Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05291
Subject:
XM_011539574.2
Aligned Length:
1863
Identities:
1391
Gaps:
471

Alignment

Query    1  ATGTTTGGGATTCAGGAGAATATTCCGCGCGGGGGGACGACCATGAAGGAGGAGCCGCTGGGCAGCGGCATGAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTTGGGATTCAGGAGAATATTCCGCGCGGGGGGACGACCATGAAGGAGGAGCCGCTGGGCAGCGGCATGAA  74

Query   75  CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCTGG  148

Query  149  CGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGGAAATCCAATTTCTTCCACTTCGTGCTGGCGCTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGGAAATCCAATTTCTTCCACTTCGTGCTGGCGCTC  222

Query  223  TACGATAGGCAGGGGCAGCCGGTGGAGATTGAAAGGACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TACGATAGGCAGGGGCAGCCGGTGGAGATTGAAAGGACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCC  296

Query  297  AAACAACGAGAAAACCAACAACGGCATCCACTATAAACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGAGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AAACAACGAGAAAACCAACAACGGCATCCACTATAAACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGAGC  370

Query  371  AAGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTACGAGGGCCAGGACAAGAACCCG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTACGAGGGCCAGGACAAGAACCCG  444

Query  445  GAGATGTGCCGTGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATAG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGATGTGCCGTGTGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATAG  518

Query  519  AAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTTCTAAAGTTTTTCCTCAAGTGCAATCAGAACT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTTCTAAAGTTTTTCCTCAAGTGCAATCAGAACT  592

Query  593  GTTTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTTTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGTGGAC  666

Query  667  GGCCACGTGCTGGCCGTGTCAGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCCGCCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGCCACGTGCTGGCCGTGTCAGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCCGCCT  740

Query  741  AGACCCGTCAGAAGCCACTCCGTGCATCAAGGCCATCAGTCCCAGTGAAGGCTGGACCACGGGGGGTGCCACCG  814
            |||||||||||||                                                             
Sbjct  741  AGACCCGTCAGAA-------------------------------------------------------------  753

Query  815  TCATCATAATTGGCGACAACTTCTTTGACGGGCTGCAAGTTGTATTCGGAACTATGTTGGTGTGGAGCGAGCTG  888
                                                                                      
Sbjct  754  --------------------------------------------------------------------------  753

Query  889  ATAACTCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCACATTCCTGGCGTCGTCGAAGTGACCCTCTCCTA  962
                                                                                      
Sbjct  754  --------------------------------------------------------------------------  753

Query  963  CAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCGCTTTGTCTACACCGCCCTTAATGAACCAACCATAGATT  1036
                                                             |||||||||||||||||||||||||
Sbjct  754  -------------------------------------------------GCCCTTAATGAACCAACCATAGATT  778

Query 1037  ACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGAGGTGTTA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  779  ACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGAGGTGTTA  852

Query 1111  CTGAAGCGGGCGGCGGACCTGGTGGAAGCCTTATACGGAATGCCTCACAACAACCAGGAGATCATCTTGAAGCG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  853  CTGAAGCGGGCGGCGGACCTGGTGGAAGCCTTATACGGAATGCCTCACAACAACCAGGAGATCATCTTGAAGCG  926

Query 1185  AGCGGCGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAATCACAACCAGATCCCCACCCTGGGCAACAACC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  927  AGCGGCGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAATCACAACCAGATCCCCACCCTGGGCAACAACC  1000

Query 1259  CTGCACACACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACGTCACAA  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001  CTGCACACACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACGTCACAA  1074

Query 1333  GCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTACTCC  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075  GCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTACTCC  1148

Query 1407  CCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAGTCTAGGGG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149  CCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGATATGGAAGTGGCGCCATGGCCAGTCTAGGGG  1222

Query 1481  TCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGCA--------------------  1534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct 1223  TCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTCTCCCTACGGCATAGTGCCGTCCAGCCCCACC  1296

Query 1535  --------------------------------------------------------------------------  1534
                                                                                      
Sbjct 1297  ATGGCAGCCTCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACACACGGCATTTTCTCATTCTCACCTGCCAA  1370

Query 1535  --------------TGAAACAGAAGAGCGCCTTCGCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCTTCCT  1594
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371  TGTCATCTCCGCAGTGAAACAGAAGAGCGCCTTCGCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCTTCCT  1444

Query 1595  GCACCAGCGCCAACGGGAATGGACTGCAAG---CTATGTCTGG--GCTG-----GTAGTCCCGC--------CA  1650
            ||||||||||||||||||||||||||||||   ||.|| ||||  ||||     ||||  ||||        ||
Sbjct 1445  GCACCAGCGCCAACGGGAATGGACTGCAAGGCTCTCTG-CTGGGTGCTGAGGACGTAG--CCGCGGAGAAGACA  1515

Query 1651  A--TG---------------------------------------------------------------------  1653
            |  ||                                                                     
Sbjct 1516  AACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATGAACTAATGCTCAAAAAAGGAACTGGAAAGCT  1589

Query 1654  -------------  1653
                         
Sbjct 1590  ATGTCTGGGCTGG  1602

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