Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05291
Subject:
XM_011539575.2
Aligned Length:
1894
Identities:
1121
Gaps:
764

Alignment

Query    1  ATGTTTGGGATTCAGGAGAATATTCCGCGCGGGGGGACGACCATGAAGGAGGAGCCGCTGGGCAGCGGCATGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CGCGGGCGCACTTCGAGAAGCAGCCGCCTTCCAACCTCCGGAAATCCAATTTCTTCCACTTCGTGCTGGCGCTC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TACGATAGGCAGGGGCAGCCGGTGGAGATTGAAAGGACCGCTTTTGTGGACTTTGTGGAGAAAGAGAAAGAGCC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAACAACGAGAAAACCAACAACGGCATCCACTATAAACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGAGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAGATCTGTATGTTCGCCTCATAGATTCAATGACCAAACAGGCCATCGTCTACGAGGGCCAGGACAAGAACCCG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GAGATGTGCCGTGTGCTGCTGACCCACGAGATCATGTG----CAGCCGGTGCTGTGACAAGAAAAGTTGTGGCA  514
                                             |||.|    .||.|.||.|||           |||.|    
Sbjct    1  ---------------------------------ATGGGAGGAGAGTCTGTCCTG-----------GTTTT----  26

Query  515  ATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGATTCTTTCTAAAGTTTTTCCTCAAGTGCAATCAG  588
             ||.||          .||||            ||     ||||||||||||||||||||||||||||||||||
Sbjct   27  -TAAAA----------GTCAG------------TT-----ATTCTTTCTAAAGTTTTTCCTCAAGTGCAATCAG  72

Query  589  AACTGTTTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGT  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   73  AACTGTTTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTTGTTGTATCGACAACAGTCAACGT  146

Query  663  GGACGGCCACGTGCTGGCCGTGTCAGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCC  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  147  GGACGGCCACGTGCTGGCCGTGTCAGACAACATGTTTGTGCACAACAATTCCAAACACGGGAGGCGGGCCCGCC  220

Query  737  GCCTAGACCCGTCAGAA---------------------------GCCACTCCGTGCATCAAGGCCATCAGTCCC  783
            |||||||||||||||||                           ||||||||||||||||||||||||||||||
Sbjct  221  GCCTAGACCCGTCAGAAGGTACGGCCCCTTCTTATCTGGAAAATGCCACTCCGTGCATCAAGGCCATCAGTCCC  294

Query  784  AGTGAAGGCTGGACCACGGGGGGTGCCACCGTCATCATAATTGGCGACAACTTCTTTGACGGGCTGCAAGTTGT  857
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  295  AGTGAAGGCTGGACCACGGGGGGTGCCACCGTCATCATAATTGGCGACAACTTCTTTGACGGGCTGCAAGTTGT  368

Query  858  ATTCGGAACTATGTTGGTGTGGAGCGAGCTGATAACTCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCACA  931
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  369  ATTCGGAACTATGTTGGTGTGGAGCGAGCTGATAACTCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCACA  442

Query  932  TTCCTGGCGTCGTCGAAGTGACCCTCTCCTACAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCGCTTTGTC  1005
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  443  TTCCTGGCGTCGTCGAAGTGACCCTCTCCTACAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCGCTTTGTC  516

Query 1006  TACACCGCCCTTAATGAACCAACCATAGATTACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGG  1079
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  517  TACACCGCCCTTAATGAACCAACCATAGATTACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGG  590

Query 1080  TGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGAAGCGGGCGGCGGACCTGGTGGAAGCCTTATACGGAATGC  1153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  591  TGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGAAGCGGGCGGCGGACCTGGTGGAAGCCTTATACGGAATGC  664

Query 1154  CTCACAACAACCAGGAGATCATCTTGAAGCGAGCGGCGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAAT  1227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  665  CTCACAACAACCAGGAGATCATCTTGAAGCGAGCGGCGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAAT  738

Query 1228  CACAACCAGATCCCCACCCTGGGCAACAACCCTGCACACACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCA  1301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  739  CACAACCAGATCCCCACCCTGGGCAACAACCCTGCACACACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCA  812

Query 1302  GCTAGCCGTCAACGTGTCAGAGACGTCACAAGCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGT  1375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813  GCTAGCCGTCAACGTGTCAGAGACGTCACAAGCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGT  886

Query 1376  CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGA  1449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGTCCAATTACAACACAGTCAGCACTAGCATGAATGGA  960

Query 1450  TATGGAAGTGGCGCCATGGCCAGTCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTC  1523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961  TATGGAAGTGGCGCCATGGCCAGTCTAGGGGTCCCTGGCTCGCCTGGATTTCTTAATGGCTCCTCCGCTAACTC  1034

Query 1524  TCCCTACGGCA---------------------------------------------------------------  1534
            |||||||||||                                                               
Sbjct 1035  TCCCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCA  1108

Query 1535  ---------------------------------------------TGAAACAGAAGAGCGCCTTCGCGCCCGTG  1563
                                                         |||||||||||||||||||||||||||||
Sbjct 1109  CACACGGCATTTTCTCATTCTCACCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGCGCCTTCGCGCCCGTG  1182

Query 1564  GTCCGGCCCCAAGCCTCTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCAAG---CTATGTCTGG  1634
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||.|| ||||
Sbjct 1183  GTCCGGCCCCAAGCCTCTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCAAGGCTCTCTG-CTGG  1255

Query 1635  --GCTG-----GTAGTCCCGC--------CAA--TG--------------------------------------  1653
              ||||     ||||  ||||        |||  ||                                      
Sbjct 1256  GTGCTGAGGACGTAG--CCGCGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATG  1327

Query 1654  --------------------------------------------  1653
                                                        
Sbjct 1328  AACTAATGCTCAAAAAAGGAACTGGAAAGCTATGTCTGGGCTGG  1371

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