Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05629
Subject:
NM_001289952.1
Aligned Length:
2239
Identities:
427
Gaps:
1748

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTTTTTCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  148

Query    1  -----------ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTG  63
                       |.||||||||||||||..||.||||||||||||||.|.|||||||.||||..|||||||||||
Sbjct  149  CTTCCAAATGCACGATGAAGGAGTTCTTGTCAACAGCGCAAGGCAACAGAGAAGTGTTCCATGCAGGGACATTG  222

Query   64  CAAAGACATGAAAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTT  137
            ||||.|||||||||||||||||.|.||||||||||||.||||||..||||.||||||||||||.|||.|||.||
Sbjct  223  CAAATACATGAAAGTCATCACAATGGAGATTTTTGCTACCAGGATGTTGATAAAGATATTCATGACTATGAATT  296

Query  138  TCAGTGGCAAGAAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAG  211
            |||.|||||||||||.|||||.|||||.||.|||||||||||||||.||||||||.|||||||.||||.|||||
Sbjct  297  TCAATGGCAAGAAGATGAAAGAAATGGCCATGAAGCACCCATGACAAAAATCAAAAAGTTGACAGGTATTACAG  370

Query  212  ACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTG  285
            |.|||.||||||||||.||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  371  AACGATATGATCAAAGTCATGCTAGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTCATTCGCATCTG  444

Query  286  CCTGAACTCCACATATTTCAGCCTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTT  359
            ||||||.|.||||||||||||.|.|||..||||||||.|||||||||||.|||||||.||..|.||||.|||||
Sbjct  445  CCTGAAATGCACATATTTCAGACCGAAGAGAAAATTGATAATCAAGTTGTGAAGTCTGTCCACGATGCTTCCTT  518

Query  360  AATTTTGACATCCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCC  433
            ..|||..|||.|||||||||||||||||||.||||||||||.|||.|||||||||.||||||||||||.|....
Sbjct  519  GGTTTCAACAGCCCAAAGAATTTCTTGTAGGCCCAAAACCCATATATCTAATAACCATGGGAATAATTTCTGGA  592

Query  434  ATTCTTCATTACCCATACAAAAATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATG---------------  492
            ||||||||||||.||.||||||| ..|||||||||||||||||||||||||||||||||               
Sbjct  593  ATTCTTCATTACTCACACAAAAA-CAGGAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAA  665

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  666  AGCCTTTAATTACAGCTCACTCTTAAGGAAACATCAGATAATCCATTTAGCAGACAAATATAAATGTGATGTAT  739

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  740  GTGGCAAGCTCTTTAATCAGAAGCGAAACCTAGCATGCCATCGTAGATGTCACACTGGTGAGAATCCTTACAAG  813

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  814  TGTAATGAGTGTGGCAAGACCTTCAGTCAGACGTCATCCCTTACATGCCATCGTAGACTTCATACTGGAGAGAA  887

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  888  ACCTTACAAATGTGAAGAATGTGACAAAGCTTTCCATTTCAAATCAATACTTGAAAGACATAGGATAATTCATA  961

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  962  CTGAAGAGAAACCATATAAGTGTAATGAGTGTGGCAAGACCTTTAGGCAGAAGTCAATCCTTACACGCCATCAT  1035

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1036  CGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCACAAGTCATCCCTTAC  1109

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1110  ATGCCATCATAGACTTCATACTGGAGAGAAACCCTACAAATGTAATGAGTGTGGCAAGACCTTTAGTCACAAGT  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  CATCCCTTACATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCTTAC  1257

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1258  AGTTTCAGATCAAATTTTGAAATACATCGGAAAATTCATACTGAAGACAATGCTTACAAGTGTAATGAGTGTGG  1331

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1332  AAAGACCTTTAGCCGGACATCATCCCTTACATGCCATCGTAGACGTCATACTGGAGAGCAACCTTACAAATGTG  1405

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1406  AAGAATGTGACAAAGCTTTCCGTTTCAAATCAAACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCA  1479

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1480  TACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCGGAAGTCATACCTCACATGCCATCATAGACTTCATACTGG  1553

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1554  AGAGAAAGCTTACAAGTGTAATGAGTGCGGCAAGACCTTTAGTTGGAAGTCATCCCTTACCTGCCATCGTAGAC  1627

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1628  TTCATTCTGGAGAGAAACCTTACAAGTGTAAGGAGTGTGGCAAGACCTTCAATCAGCAGTTAACCCTTAAACGC  1701

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1702  CATCGTAGACTTCATAGTGGAGAGAACCCTTACAAATGTGAAGATAGTGACAAAGCTTACAGTTTCAAATCAAA  1775

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1776  CCTTGAAATACATCAGAAAATTCATACTGAAGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTC  1849

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1850  GGACGTCATCCCTTACATGCCATCGTAGACTTCATACCGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAA  1923

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1924  GCTTTCCGTGTGAAATCAAACCTTGAAGGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAGTGTAATGA  1997

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1998  GTGTGGCAAGACCTTTAGTCGGAAGTCATATTTTATATGCCATCATAGACTTCATACTGGAGAGAAACCTTATA  2071

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2072  AGTGTAATGAGTGTGGCAAGAACTTTAGTCAGAAGTCATCCCTTATATGCCACCATAGACTTCATACTGGAGAG  2145

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2146  AAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAAGTCAAACCTTACATGCCATCGTAGACTTCA  2219

Query  493  -------------------  492
                               
Sbjct 2220  TACTGGAGAAAAACAAGTG  2238

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