Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05629
Subject:
NM_001350495.1
Aligned Length:
1411
Identities:
428
Gaps:
920

Alignment

Query    1  ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGA  74
            |||||||||||||||||.||.|||||.||||||||||.|||||||.||||..|||||||||..|||||||||||
Sbjct    1  ATGATGAAGGAGTTCTCGTCAACAGCACAAGGCAATAGAGAAGTGTTCCATGCAGGGACATCTCAAAGACATGA  74

Query   75  AAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAG  148
            |||||||||||.|.||||||||||.||||||||.|||||.||||||||||||.||.||||||||||||||||||
Sbjct   75  AAGTCATCACAATGGAGATTTTTGTTTCCAGGATATTGATAAAGATATTCATGACATTGAGTTTCAGTGGCAAG  148

Query  149  AAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGAT  222
            ||||.|||||.|||||.||.|||||||.|||||||.||||||||.|||||||.|||||||||||.|||.|||||
Sbjct  149  AAGATGAAAGAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGACAGGTAGTACAGAGCGATATGAT  222

Query  223  CAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCA  296
            ||||...|||||||||||||||||.|||||.||||||||||||.|||||||||||||||||||||||||||.||
Sbjct  223  CAAAATTATGCTGGAAACAAGCCTGTTAAATATCAGCTTGGATTCAGCTTTCATTCGCATCTGCCTGAACTGCA  296

Query  297  CATATTTCAGCCTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACAT  370
            |||||||||..|||||..||||||||.|||||||||||.||||||||||..|.||||.|||||..|||..|||.
Sbjct  297  CATATTTCACACTGAAGAGAAAATTGATAATCAAGTTGTGAAGTCTATCCACGATGCTTCCTTGGTTTCAACAG  370

Query  371  CCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTA  444
            |||||||||||||||||||.||..||||||.||||||||||.|||||||||||||||.|||..|||||||||||
Sbjct  371  CCCAAAGAATTTCTTGTAGGCCTGAAACCCATATTTCTAATGACTATGGGAATAATTTCCTGAATTCTTCATTA  444

Query  445  CCCATACAAAAATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATG--------------------------  492
            ..||.||||||| ..|||||||||.|||||.|||||||||||||||||                          
Sbjct  445  TTCACACAAAAA-CAGGAAGTACATATGAGGGAAAAATCTTTCCAATGCAATGACAGTGGCAAAGCCTATAATT  517

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  518  GTAGCTCACTCTTAAGGAAACATCAGTTAATCCATTTAGGAGAGAAACAATATAAATGCGATATATGTGGCAAG  591

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  592  GTCTTTAATTCGAAGCGATACGTTGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGA  665

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  666  GTGTGGCAAGACCTTCAGTCAGACATATTACCTAACATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACA  739

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  740  AATGTGAAGAATGTGACAAAGCTTTCCATTTCAAATCAAAGCTTCAAATACATAGGAGAATTCATACTGGAGAG  813

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  814  AAACCGTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAAGTCGTACCTTACATGCCATCGTAGGCTTCA  887

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  888  TACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCGGAAGTCACATTTTACATGCCATC  961

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  962  ATAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTAGCAAGACCTTTAGTCACAAGTCATCTCTT  1035

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1036  ACATACCATCGTAGACTTCATACTGAAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAATCAGCA  1109

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1110  GTTAACCCTTAACATTTGTAGACTTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCCTACA  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  GTTTCAAATCAAACCTTGAAATACATCAGAAAATTCATACTGAAGAGAATCCTTACAAGTGTAATGAGTGTGGC  1257

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1258  AAGACCTTCAGCCGGACGTCATCCCTTACATACCATCATAGACTTCATACTGGACAGAAACCTTACAAATGTGA  1331

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1332  AGATTGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGAGAATTTATACTGGAGAGAAACTAC  1405

Query  493  -----  492
                 
Sbjct 1406  ACGTG  1410

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