Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05629
Subject:
NR_102300.2
Aligned Length:
4760
Identities:
441
Gaps:
4269

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGTTCCGTCTCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGGGCTCACACCCCGACATGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTTCAGGGGCCACATCTGGATG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTATTAATATGCACGAAGTACG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGGAGTTTTGGTCTGTCATCCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCTAAAGTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCA  592

Query    1  ------------------------------------------ATGATGAAGGAGTTCTCATCCACAGCGCAAGG  32
                                                      |||.|||||..|||.||.||.||||.||||||
Sbjct  593  GCCTTCCAAGTACCTGGGACTACAGATATCTCTTCCAAATGCATGTTGAAGACGTTGTCGTCAACAGGGCAAGG  666

Query   33  CAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATTTTTGCTTCCAGG  106
            |||||||||||||||||||||||||||||||||.|||||.|.|||||||||||||.||||.|||||.|||||.|
Sbjct  667  CAATACAGAAGTGATCCACACAGGGACATTGCACAGACAAGCAAGTCATCACATTGGAGAATTTTGTTTCCATG  740

Query  107  AAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCACGAAGCACCCATG  180
            |||||||||||||.||||||..|||.||||||||||||.|||||||.||||..|||||.||.|.||||||||||
Sbjct  741  AAATTGAGAAAGACATTCATGGCTTCGAGTTTCAGTGGAAAGAAGATGAAACAAATGGCCATGCAGCACCCATG  814

Query  181  ACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGA  254
            ||||||||||||||||||.||||||||||||.||.|||||||||||||||||||||||||||||.|||||||||
Sbjct  815  ACAGAAATCAAAGAGTTGGCTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCGTATTAAAGA  888

Query  255  TCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGAATGGAAAATTGGTAATC  328
            ||||||||||||.||||||||||.||||||||||||||..||||||||||||.|||||.|||||||||||||||
Sbjct  889  TCAGCTTGGATCAAGCTTTCATTTGCATCTGCCTGAACCGCACATATTTCAGTCTGAAGGGAAAATTGGTAATC  962

Query  329  AAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAGTCCCAAAACCCGT  402
            ||||||||||||||||||.||||||.||||.|.|||..||||||||||||||||.||||||.||||||||||.|
Sbjct  963  AAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCAT  1036

Query  403  ATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAAGTACACATGAGAG  476
            |||||||||||.|||||.|||||||||||||||||||||||||.||.||||||| |||||||||||||||||||
Sbjct 1037  ATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAA-TGGGAAGTACACATGAGAG  1109

Query  477  AAAAATCTTTCCAATG----------------------------------------------------------  492
            ||||||||||..||||                                                          
Sbjct 1110  AAAAATCTTTTGAATGTATACAGAGCTTCAAATCCTTTAATTGCAGCTCACTCTTAAAAAAACATCAGATAATT  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  CACTTAGAAGAGAAACAATGTAAATGTGATGTATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCCTGCCA  1257

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1258  TCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGGTCATAATTCATCCC  1331

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1332  TCTTCATTCACAAAGCGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGC  1405

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1406  AAATCACACCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATGAGGC  1479

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1480  TTTCGCATATAATTCATATCTGGCAAAACATACTATACTTCACACTGGAGAGAAACCTTACACATGTAATGAAT  1553

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1554  GTGGCAAAGTTTTTAATCGACTATCAACCCTTGCACGCCATCATAGACTTCATACTGGAGAGAAACCTTACAAA  1627

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1628  TGTGAAGAGTGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGGATTCATAGTGGAGAGAA  1701

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1702  ACCTTACAAATGTGAAGAATGTTGCAAAGTTTTCAGTCGCAAATCAAACCTGGAAAGACACAGGAGGATTCATA  1775

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1776  CTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCAGAGGGATTCACACCTGGCACAACATCAG  1849

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1850  AGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACATCATCGCTTAT  1923

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1924  AATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGT  1997

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1998  CATCCCTTGTATACCATCATAGGCTTCATAGTGGAGAGAAGCCTTAATAGTGTAATGAGTGTGGCAAGACCTTC  2071

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2072  CATCACAATTCAACCCTGTAAGTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGCATAATGAATGTGGC  2145

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2146  AAGGTTTTTAATCAAAAAGCAACCTTTGCACATCACCATAGACTTCATACTGGAGAGAAACCTTACAAATGGGA  2219

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2220  GGAATGTGACAAAAGTTTTCAGTTGTAAATCAAACCTTAAAACACATAAGAAAATTCACATTGAAGAGAAACCA  2293

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2294  TACAGAGGTAAGGTTTGTGACAAGGTTTTTGCATATAATGCATATCTGGCAAAACATACTAGAATTCACACTGG  2367

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2368  AGAGAAACTCATTATAAGTGTAATGAGTGTGGCAAGACCGTTGGTCAAAATTCACACCTTGTAATTAAAAGGTC  2441

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2442  AAAATTCACACCTTGTAATTCATAGTGGAGAGAAACCTTACAAGCACAATGAATGTGACATGGTTTTTAATCAA  2515

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2516  CAATCACACCTTGCAAGTCATCATAGACTTCATACTGCATAGAAATCTTACAAACGTGAACAATGTGACAAAGT  2589

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2590  TTTCATTCACAAATCCAGCTTCAAATACATAGGAGAATTCACACTGGAGAAAAGCCATAGAAATGTAAGGTTTG  2663

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2664  TGACAAGGCTTTCGGGAATGATTCACACGTGGCACCCCATACTAGAATTCACACTGGAGAGAAACCTTACAAGT  2737

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2738  GCAATGAGTGTGGCAAACCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATGGTATAGGGAAA  2811

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2812  CTTGACTAATGTAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCACATCATTGGAGAATCCACAG  2885

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2886  TGAAGAGATCTTACAAGTGTAATAAATGTGGCAAATTTTTCAGACATCGTTCATGCCTTGCATTTCACTGGTGA  2959

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2960  ACTCATGCTGGAGAGAAACCTTATAAATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAA  3033

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3034  ACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCAC  3107

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3108  ACCTCATTAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGAAGGGTCTTCAGT  3181

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3182  CCAAGGTCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCAGTGAGTATAGCAA  3255

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3256  ACCATCAAGCATTAATTGACATTAGAGTCAAATCAGCCTTGACCTGAGTTTGTTGATTTAACATTGATTTCAAG  3329

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3330  CATTAATTGCCATTAAACTGTTTATGTTAAGAGGATTGCACTGGGGGCCATGGCTCATGCCTGTAATTCCAGCA  3403

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3404  CTTTGAGAGGCAAAGACAGGTAGGTCACTGGAGCTCACGAGTTTGAGAACAGCCTAGCCAACAGATGGGAGCTA  3477

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3478  CTTTTCCCAGCCTTTATTTTCTTTTTCTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGTTGGAG  3551

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3552  TGCAGTGGCACGATCTCAGCTCACTGCAACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCA  3625

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3626  AGTAGCTGACACTACAGTTGTGTGCCACCACACCTGGGTAATTTTTTGTGTTTTTAGTAGAGACTGGGTTTCAC  3699

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3700  CGTGTTAGCCAGAATGGTCTCTATCTTCTGACTTTATGATCCACCCGACTCCACCTCCCAAAGTGCTGAGATTA  3773

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3774  CAGGAGTGAGCCACTGTGCCTGGCCTGTTTTTTGTTTCTTTAACAAAAAGTTATAGAGACTTCTATGAGTATTG  3847

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3848  TACCGAATCTAAATCACAATTGAGTATATAATCATTGAGCGATATTCATTTTTCCAATCAGTATGGGATTTATA  3921

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3922  TCTATTTATACATGTTTTTAATCATTTTGATCAATGTTTATAGATTTCAAGGTACAAACCTCACTTTTTATGTT  3995

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3996  TATTCCTAAATATTTCTTACTTTAAGTTCTTTAGCAAATGGAATTGGTTTTTAATTTTCTTTTAAAATTATTTA  4069

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4070  TTGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTGTTATTCTATTCTGCAAATAAACTGAATGTGTTTGTT  4143

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4144  AGTTCCAGTTGCATTTTGGCTGACTCTTTGTGATTTTCTTTACAGAAGGTCATGTCATCTACAAACAAATAAAA  4217

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4218  TTTGACTTCTTTCTTTCTGATTTGGATGAGTTTGATTTCTTTTGCTATTTCATTGTTCTGGCTAGGACAGCCAG  4291

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4292  TATTGATTGAATAGAAGGGGTGAGAGCATTCTTGCATCATGTGAGATCCTACAGGAAAAGCATTCCGTTTTCCC  4365

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4366  TGATTGGTTATTTCTGCTGTGGTCATTTCATGGATGGTCTTTGTATTGCTGAGGTAAATTTTCTTCTGTATCTA  4439

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4440  TTTTGTGTGGGATTTCTATGATGACTTGATGTTGACTTTTGTGAAATGCTTTTTCTCCATGTATTGAGATGATG  4513

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4514  TGGTTTTCATCTTTCATTGTGTTCAAGTGGTATATCACATTGATTTGCTTGACTATGTTGAACCATCCTTGCAT  4587

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4588  CCCAGAAATAAGTGGCACTTGCATATCTACAATCCTTTTAATATCCTCTTGAATACAGTTCGCTAGTACAAGGG  4661

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4662  GTCTTCAAGAAGTTCATGAAAAAAATACATATTATGTGAAAATTGCACATGATGTCACATTTTCTGCACCAAAA  4735

Query  493  ------------------------  492
                                    
Sbjct 4736  TAAACTGGCACAAATCTGTTATAA  4759

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