Nucleotide Global Alignment

Description

Query:
ccsbBroad304_05629
Subject:
XR_935832.3
Aligned Length:
4230
Identities:
434
Gaps:
3740

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGATTAACGCAAACCCGGAAGCGGATCGGGTGGAGTGAAGGTCACGTCGCCATGGATTGATTTCTAAAGACTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGTTACGTGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGTCAGGCATGGCTCTTCCTCAGATATCTCTTCC  148

Query    1  ------ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAG  68
                  ||||||||||||.|||..||.||||.|||||||||||.||||||||||||||||||||||||||||||
Sbjct  149  AAACACATGATGAAGGAGGTCTTGTCAACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAG  222

Query   69  ACATGAAAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGT  142
            ||||.|||||.||||||||.||||.||||||||||||||||||||||||||.|||||||||.||||||||||||
Sbjct  223  ACATCAAAGTTATCACATTGGAGACTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGT  296

Query  143  GGCAAGAAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGA  216
            |.||||||||.|||||.|||||.||.||||||||||.||||.||||.|||.|||||||||||||.|||||||.|
Sbjct  297  GTCAAGAAGATGAAAGAAATGGCCATGAAGCACCCACGACAAAAATAAAAAAGTTGACTGGTAGCACAGACCAA  370

Query  217  CATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGA  290
            ||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||.||||.|||||||||||
Sbjct  371  CATGATCACAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGA  444

Query  291  ACTCCACATATTTCAGCCTGAATGG-AAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATT  363
            |||||||||||||||| .|.||.|| .||||||.|||||||.||||||||||||.||...||||.||||.|.||
Sbjct  445  ACTCCACATATTTCAG-ATCAAAGGTGAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCTCAGTT  517

Query  364  TTGACATCCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTC  437
            |..|||||||||||||||||.|||||.|||.|||.||.|||||||||||||||||||||||||.||||..||||
Sbjct  518  TCAACATCCCAAAGAATTTCCTGTAGGCCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTGAATTC  591

Query  438  TTCATTACCCATACAAAAATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATG-------------------  492
            ||||||||.|..||||||| ..|||||||||||||||||||||||||||||.|||                   
Sbjct  592  TTCATTACTCCCACAAAAA-CAGGAAGTACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAAAGCC  664

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  665  TTTAATTGTAGCTCACTCTTAAGGAAACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATG  738

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  739  TGGCAAGCTCTTTAATCACAAGCAATACCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTACAAGT  812

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  813  GTAAAGAGTGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGTAAAA  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  CCTTACAAGTGTAATGAGTGTGGCAAGGTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATAC  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  TGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCATCAAA  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  GACTTCATACTGGAGTGAAACCTTACAAATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCA  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  AACCATACTAGAATTCATAGTGGAGAGAAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATC  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  AAGCCTTGCACGTCATCATATACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCA  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  GTCAGAAATCAACCCTTGAGAGACATAAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGAT  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  ACAGCTTTCACGTGTAATTCACAGCTGGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAA  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  TGAGTGTCGCAAGACCTTCAGCCGCAGGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTT  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  ACAAGTGTAATCAGTGTGGCAATACCTTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTA  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  GAGAAATCTTACAAATGTACGGTTTGTAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAAT  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  TCACACTGCAAAGAAACCTTACAAGTGTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCACGTC  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  ATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAATCAGCT  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  CTTGAGTCACATAAGAGAATTCATACTGGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGCTTTCACGTG  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  GAATTCACAGCTGGCACGACATACAAGAATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGTGTGGGAAGA  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  CCTTCAGTTACAAGTCATCACTTGTATGGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTT  1996

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1997  TGTGACAAGGCTTTCGTGTGTCGTTCCTATGTGGCAAAACATACTAGAATTCACAGTGGAATGAAACCTTACAA  2070

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2071  GTGTAATGAGTGCAGCAAGACCTTCAGTAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATAGTGGTGAGA  2144

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2145  AACCTTACAAGTGTAGTGAGTGCAGCAAGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGTAGACTTCAT  2218

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2219  AGTGGTGAGAAACCTTACAAGTGTAACGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTATACCATCG  2292

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2293  TAGACTTCATACTGGAGAGAAATCTTACAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGG  2366

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2367  CAAGACATATTAGAATTCACACTGCAGAGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAA  2440

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2441  TCACACCTTTCACGTCATCATAGAATTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTT  2514

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2515  CAGTCGCAAATCACACCTTAAAAGACATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTG  2588

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2589  GCAAAGCCTTTAGTGACCGGTCAACACTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGATTAATAT  2662

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2663  AATGATTGTCACAAAGTCTTCAGTAACACTACAACAATTGCAAATCATTGGAGAATCCATGATGAAGAGAAATC  2736

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2737  TTCTGAGTGTAATAAATGTGGCATGTTTTTCAGACATTGTTCATACATTGCAGTTCATTGGCAACCTCATACTG  2810

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2811  GAGAGAAACCTTACAAATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACAGGAGAAT  2884

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2885  TCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGAC  2958

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2959  ATCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTC  3032

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3033  CTTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGCTTTTCAGTAAGTGGTATGCCTGG  3106

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3107  GAAACATGGTGAGACCCCCGTTTCTGCAAAAAATACAAAAATTAGCTGGGAATGATGGCACATGCCTGCAGTAT  3180

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3181  CAACTACTGTGGAGTCTGCAGTGGGAGGATGGCTTGAGCCTGGGAGGTCAAGACTATAGTGAGCTGTAATCATG  3254

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3255  CTACTGCACTCCAGCATGGTTGACAGAGCAAGATGCTGTCTAAAAAAGAATACTTATTGTAAAGTTTGGGTACA  3328

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3329  GGAATAATGAAGTCATTGATAGTTTATGAACAGGCTATGGAGTTGATGCCCAAAAGAAATAAACAGTTTGTAAA  3402

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3403  TGAATAACTTATTTTGAGTTGTGACAAGACAATGTTGAAAGTGATGCATGAAGCGGCAGGCAGACCATCCACAT  3476

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3477  CAGTTTTACAGAAAAAAAGTTAATCTTGTTCGTGCTGCAGTGAAGAGAACAGCAAACAGGAGAAACAATAGTCA  3550

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3551  GGAATTCAATAATAGCCTGGTTAACATGATGAAACCCCGTCTCTACTAAAAATACAAAGATTAGCTGGGCACAG  3624

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3625  TGGTGGGCACCTGTAATCCCAGCTACTCAAGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCGGAAGTT  3698

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3699  TCGATGAGCCGGGATCCTGCCGTTGCACTCCAGCCTGGGCAACAAGAGCAAACCTCTGTCTAAAACAAACAAAC  3772

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3773  AAAAAGGTCTAGCCCCCTCTCCTCCTTTGTCTGCCATCATGGTGTGTGCTTGACTCCACTTCTTGTCATGTCTT  3846

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3847  CTCACAAGACTTTCAGGATTAAGCGGTTTCTGGCCAACAACCAAAAGTAAAATCGTCCGATTTCCCAGTGGATT  3920

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3921  CGAATGAAAACTGGCAATAAAATCAGGTCCAACTTTAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATA  3994

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3995  AGGAATTGCACGTGAGATGGCACACATATTTATGCTGTGTGAGCATCATAATCACGTTACTTAAGCTGAAAATG  4068

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4069  TCACTACCATCTGGAGACTTGGACATGTTTTATTGGGAATATATTTTTTTCTCTCTGAATCTGTTATGAACGCA  4142

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4143  TTGGTTGGGTGGGTTCAGTAATAAACATGTGAGACCTTTCATTTCAAAAAAAAAATTTTAATGACATAATAGAT  4216

Query  493  ------------  492
                        
Sbjct 4217  TACCTAAATTTC  4228

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