Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06326
Subject:
XM_017314275.1
Aligned Length:
2721
Identities:
2266
Gaps:
210

Alignment

Query    1  ATGCAGCACATTTTTGCCTTCTTCTGCACCGGTTTCCTAGGCGCGGTAGTAGGTGCCAATTTCCCCAACAATAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCAGATCGGGGGATTATTTCCAAACCAGCAGTCACAGGAACATGCTGCTTTTAGATTTGCTTTGTCGCAACTCA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGAGCCCCCGAAGCTGCTCCCCCAGATTGATATTGTGAACATCAGCGACAGCTTTGAGATGACCTATAGATTC  222
                                                                       |||||.||..|||||
Sbjct    1  -----------------------------------------------------------ATGACTTACCGATTC  15

Query  223  TGTTCCCAGTTCTCCAAAGGAGTCTATGCCATCTTTGGGTTTTATGAACGTAGGACTGTCAACATGCTGACCTC  296
            |||||||||||||||||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||||||||
Sbjct   16  TGTTCCCAGTTCTCCAAAGGAGTGTACGCCATCTTTGGATTTTATGAACGAAGGACTGTCAACATGCTGACCTC  89

Query  297  CTTTTGTGGGGCCCTCCACGTCTGCTTCATTACGCCGAGCTTTCCCGTTGATACATCCAATCAGTTTGTCCTTC  370
            |||.||||||||||||||.||.||||||||.||.||.||.|||||||||||.||||||||||||||||||||||
Sbjct   90  CTTCTGTGGGGCCCTCCATGTGTGCTTCATCACTCCAAGTTTTCCCGTTGACACATCCAATCAGTTTGTCCTTC  163

Query  371  AGCTGCGCCCTGAACTGCAGGATGCCCTCATCAGCATCATTGACCATTACAAGTGGCAGAAATTTGTCTACATT  444
            ||||||||||.|||||.|||||.||.|||||.|||||.||.|||||||||||||||||||..||||||||||||
Sbjct  164  AGCTGCGCCCGGAACTACAGGAAGCTCTCATTAGCATTATCGACCATTACAAGTGGCAGACTTTTGTCTACATT  237

Query  445  TATGATGCCGACCGGGGCTTATCCGTCCTGCAGAAAGTCCTGGATACAGCTGCTGAGAAGAACTGGCAGGTGAC  518
            ||||||||.|||||||||.|.||.||||||||||.||||.||||||||||.||.||||||||||||||||||||
Sbjct  238  TATGATGCTGACCGGGGCCTGTCAGTCCTGCAGAGAGTCTTGGATACAGCCGCCGAGAAGAACTGGCAGGTGAC  311

Query  519  AGCAGTCAACATCTTGACAACCACAGAGGAGGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAAAAAGGAGC  592
            .||.||||||||..|.||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||.
Sbjct  312  GGCTGTCAACATTCTAACAACCACGGAGGAAGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAAAAAGGAGA  385

Query  593  GGCTGGTGGTGGTGGACTGTGAATCAGAACGCCTCAATGCTATCTTGGGCCAGATTATAAAGCTAGAGAAGAAT  666
            |||||||||||||||||||||||||||||||||||||.||.|||.|||||||||||.|.||||||||.|||||.
Sbjct  386  GGCTGGTGGTGGTGGACTGTGAATCAGAACGCCTCAACGCCATCCTGGGCCAGATTGTGAAGCTAGAAAAGAAC  459

Query  667  GGCATCGGCTACCACTACATTCTTGCAAATCTGGGCTTCATGGACATTGACTTAAACAAATTCAAGGAGAGTGG  740
            ||||||||.|||||||||||.||.||.||.||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  460  GGCATCGGGTACCACTACATCCTCGCCAACCTGGGCTTCATGGACATTGACTTAAATAAGTTCAAGGAGAGTGG  533

Query  741  CGCCAATGTGACAGGTTTCCAGCTGGTGAACTACACAGACACTATTCCGGCCAAGATCATGCAGCAGTGGAAGA  814
            .||||||||||||||||||||.||||||||||||||||||||.||.||.||||..||||||||||||||||.||
Sbjct  534  AGCCAATGTGACAGGTTTCCAACTGGTGAACTACACAGACACGATCCCAGCCAGAATCATGCAGCAGTGGAGGA  607

Query  815  ATAGTGATGCTCGAGACCACACACGGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGCTCACCTACGATGGG  888
            ..|||||.|||||.||||||||..||||||||||||||||.||.||||||||.|||||.||.|||||.|||||.
Sbjct  608  CAAGTGACGCTCGGGACCACACCAGGGTGGACTGGAAGAGGCCAAAGTACACTTCTGCTCTTACCTATGATGGT  681

Query  889  GTGAAGGTGATGGCTGAGGCTTTCCAGAGCCTGCGGAGGCAGAGAATTGATATATCTCGCCGGGGGAATGCTGG  962
            ||||||||||||||.|||||.|||||||||||||||||||||||.|||||.|||||.||.||.|||||||||||
Sbjct  682  GTGAAGGTGATGGCGGAGGCCTTCCAGAGCCTGCGGAGGCAGAGGATTGACATATCCCGGCGAGGGAATGCTGG  755

Query  963  GGATTGTCTGGCTAACCCAGCTGTTCCCTGGGGCCAAGGGATCGACATCCAGAGAGCTCTGCAGCAGGTGCGAT  1036
            |||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||.|
Sbjct  756  GGACTGTCTGGCTAACCCAGCTGTGCCCTGGGGCCAAGGGATCGACATCCAGAGAGCCCTGCAGCAGGTGCGCT  829

Query 1037  TTGAAGGTTTAACAGGAAACGTGCAGTTTAATGAGAAAGGACGCCGGACCAACTACACGCTCCACGTGATTGAA  1110
            ||||||||||.||||||||.|||||||||||.||||||||.|||||||||||||||||.|||||.|||||.|||
Sbjct  830  TTGAAGGTTTGACAGGAAATGTGCAGTTTAACGAGAAAGGGCGCCGGACCAACTACACCCTCCATGTGATCGAA  903

Query 1111  ATGAAACATGACGGCATCCGAAAGATTGGTTACTGGAATGAAGATGATAAGTTTGTCCCTGCAGCCACCGATGC  1184
            |||||.|||||.||.|||||.|||||||||||||||||||||||||||||.||||||||.||||||||.||.||
Sbjct  904  ATGAAGCATGATGGAATCCGCAAGATTGGTTACTGGAATGAAGATGATAAATTTGTCCCCGCAGCCACGGACGC  977

Query 1185  CCAAGCTGGGGGCGATAATTCAAGTGTTCAGAACAGAACATACATCGTCACAACAATCCTAGAAGATCCTTATG  1258
            .||.|||||.||.||.||.|||||.||.|||||.|||||.|||||||||||.||.|||||.|||||||||||.|
Sbjct  978  TCAGGCTGGAGGGGACAACTCAAGCGTCCAGAATAGAACCTACATCGTCACGACTATCCTCGAAGATCCTTACG  1051

Query 1259  TGATGCTCAAGAAGAACGCCAATCAGTTTGAGGGCAATGACCGTTACGAGGGCTACTGTGTAGAGCTGGCGGCA  1332
            |||||||.||.|||||.|||||.||.|||||.|||||||||||.||.|||||||||||.||.||.|||||.||.
Sbjct 1052  TGATGCTTAAAAAGAATGCCAACCAATTTGAAGGCAATGACCGCTATGAGGGCTACTGCGTGGAACTGGCTGCG  1125

Query 1333  GAGATTGCCAAGCACGTGGGCTACTCCTACCGTCTGGAGATTGTCAGTGATGGAAAATACGGAGCCCGAGACCC  1406
            |||||.|||||||||||||||||.||||||||.||.|||||||||||.||.||.||||||||||||||.||.||
Sbjct 1126  GAGATCGCCAAGCACGTGGGCTATTCCTACCGACTTGAGATTGTCAGCGACGGCAAATACGGAGCCCGGGATCC  1199

Query 1407  TGACACGAAGGCCTGGAATGGCATGGTGGGAGAGCTGGTCTATGGAAGAGCAGATGTGGCTGTGGCTCCCTTAA  1480
            ||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.|
Sbjct 1200  TGACACAAAGGCCTGGAATGGCATGGTGGGAGAGCTAGTCTATGGAAGAGCAGATGTGGCGGTGGCCCCCTTGA  1273

Query 1481  CTATCACTTTGGTCCGGGAAGAAGTTATAGATTTCTCCAAACCATTTATGAGTTTGGGGATCTCCATCATGATT  1554
            |.||.||.|||||||||||.|||||.||.||.||||||||.|||||.|||||||||||.||||||||.||||||
Sbjct 1274  CCATAACCTTGGTCCGGGAGGAAGTCATCGACTTCTCCAAGCCATTCATGAGTTTGGGAATCTCCATTATGATT  1347

Query 1555  AAAAAACCACAGAAATCCAAGCCGGGTGTCTTCTCCTTCCTTGATCCTTTGGCTTATGAGATTTGGATGTGCAT  1628
            ||.||.||||||||.||||||||.||||||||||||||.|||||.||||||||.||.|||||.||||||||.||
Sbjct 1348  AAGAAGCCACAGAAGTCCAAGCCAGGTGTCTTCTCCTTTCTTGACCCTTTGGCCTACGAGATCTGGATGTGTAT  1421

Query 1629  TGTTTTTGCCTACATTGGAGTGAGTGTTGTCCTCTTCCTGGTCAGCCGCTTCAGTCCCTATGAATGGCACAGTG  1702
            .||.||||||||||||||||||||.||.||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 1422  AGTGTTTGCCTACATTGGAGTGAGCGTCGTCCTCTTCCTGGTCAGCCGTTTCAGTCCTTATGAATGGCACAGTG  1495

Query 1703  AAGAGTTTGAGGAAGGACGGGACCAGACAACCAGTGACCAGTCCAATGAGTTTGGGATATTCAACAGTTTGTGG  1776
            ||||||||||.||||||||.||.||||||||||||||||||||.|||||||||||.|||||||||||..|||||
Sbjct 1496  AAGAGTTTGAAGAAGGACGAGATCAGACAACCAGTGACCAGTCAAATGAGTTTGGCATATTCAACAGCCTGTGG  1569

Query 1777  TTCTCCCTGGGAGCCTTCATGCAGCAAGGATGTGACATTTCTCCCAGGTCCCTGTCTGGTCGCATCGTTGGTGG  1850
            |||||.|||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||.||
Sbjct 1570  TTCTCGCTGGGGGCCTTCATGCAGCAAGGATGTGACATTTCCCCCAGGTCCCTGTCTGGACGCATCGTCGGCGG  1643

Query 1851  CGTCTGGTGGTTCTTCACCTTAATCATCATCTCCTCATATACAGCCAATCTGGCCGCCTTCCTGACCGTGGAGA  1924
            .|||||||||||||||||.||.||.||||||||||||||.||||||||.|||||.|||||||||||.|||||.|
Sbjct 1644  TGTCTGGTGGTTCTTCACTTTGATTATCATCTCCTCATACACAGCCAACCTGGCTGCCTTCCTGACTGTGGAAA  1717

Query 1925  GGATGGTGTCTCCCATTGAGAGTGCAGAGGACCTAGCGAAGCAGACAGAAATTGCCTACGGGACGCTGGAAGCA  1998
            ||||||||||||||||.|||||||||||||||||.||.||||||||.||||||||.||.|||||..||||||||
Sbjct 1718  GGATGGTGTCTCCCATCGAGAGTGCAGAGGACCTGGCAAAGCAGACGGAAATTGCTTATGGGACATTGGAAGCA  1791

Query 1999  GGATCTACTAAGGAGTTCTTCAGGAGGTCTAAAATTGCTGTGTTTGAGAAGATGTGGACATACATGAAGTCAGC  2072
            |||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 1792  GGATCCACTAAGGAGTTCTTCAGGAGGTCTAAAATCGCTGTGTTTGAGAAGATGTGGACATACATGAAGTCTGC  1865

Query 2073  AGAGCCATCAGTTTTTGTGCGGACCACAGAGGAGGGGATGATTCGAGTGAGGAAATCCAAAGGCAAATATGCCT  2146
            |||.||.||.||.|||||.|||||||||||||||||.|||||..|||||||.||.||.||||||||||||||||
Sbjct 1866  AGAACCGTCTGTGTTTGTTCGGACCACAGAGGAGGGCATGATCAGAGTGAGAAAGTCTAAAGGCAAATATGCCT  1939

Query 2147  ACCTCCTGGAGTCCACCATGAATGAGTACATTGAGCAGCGGAAACCCTGTGACACCATGAAGGTGGGAGGTAAC  2220
            |||||||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||.||||||||||||
Sbjct 1940  ACCTCCTGGAGTCCACCATGAATGAGTACATTGAGCAACGCAAGCCCTGTGACACCATGAAAGTGGGAGGTAAC  2013

Query 2221  TTGGATTCCAAAGGCTATGGCATTGCAACACCCAAGGGGTCTGCCCTGAGAAATCCAGTAAACCTGGCAGTGTT  2294
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2014  TTGGATTCCAAAGGCTATGGCATTGCAACACCCAAGGGGTCCGCCCTGAGAAATCCAGTAAACCTGGCAGTGTT  2087

Query 2295  AAAACTGAACGAGCAGGGGCTTTTGGACAAATTGAAAAACAAATGGTGGTACGACAAGGGCGAGTGCGGCAGCG  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2088  AAAACTGAACGAGCAGGGGCTTTTGGACAAATTGAAAAACAAATGGTGGTACGACAAGGGCGAGTGCGGCAGCG  2161

Query 2369  GGGGAGGTGATTCCAAGGACAAGACAAGCGCTCTGAGCCTCAGCAATGTGGCAGGCGTGTTCTACATCCTGATC  2442
            ||||||||||.||||||||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||.
Sbjct 2162  GGGGAGGTGACTCCAAGGACAAGACCAGTGCTCTGAGCCTGAGCAATGTGGCAGGCGTGTTCTACATCCTGATT  2235

Query 2443  GGAGGACTTGGACTAGCCATGCTGGTTGCCTTAATCGAGTTCTGCTACAAATCCCGTAGTGAATCCAAGCGGAT  2516
            |||||.||.|||.|.||||||||||||||||||||||||||||||||||||||||||||.||.||.||||||||
Sbjct 2236  GGAGGGCTGGGATTGGCCATGCTGGTTGCCTTAATCGAGTTCTGCTACAAATCCCGTAGCGAGTCGAAGCGGAT  2309

Query 2517  GAAGGGTTTTTGTTTGATCCCACAGCAATCCATCAACGAAGCCATACGGACATCGACCCTCCCCCGCAACAGCG  2590
            |||||||||.||||||||.|||||||||||||||||.|||||||||||||||||||||||||||.|.|||||||
Sbjct 2310  GAAGGGTTTCTGTTTGATTCCACAGCAATCCATCAATGAAGCCATACGGACATCGACCCTCCCCAGGAACAGCG  2383

Query 2591  GGGCAGGAGCCAGCAGCG---GCGGCAGTGGAGAGAATGGTCGGGTGGTCAGCCATGACTTCCCCAAGTCCATG  2661
            ||||||||||||||.|.|   |.|||||||||||||||||..|.|||||||||||.||||||||||||||||||
Sbjct 2384  GGGCAGGAGCCAGCGGAGGAAGTGGCAGTGGAGAGAATGGCAGAGTGGTCAGCCAGGACTTCCCCAAGTCCATG  2457

Query 2662  CAATCGATTCCTTGCATGAGCCACAGTTCAGGGATGCCCTTGGGAGCCACGGGATTG  2718
            |||||.|||||.||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 2458  CAATCCATTCCCTGCATGAGCCACAGTTCAGGGATGCCCTTGGGAGCCACAGGATTG  2514

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