Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06702
Subject:
XM_006507438.3
Aligned Length:
3393
Identities:
2784
Gaps:
204

Alignment

Query    1  ATGAGGAGGGACGAGCGAGA--------CGCCAAAGCCATGCGGTCCCTGCAGCCGCCG---GATGGGGCCGGC  63
            |||||||..||||||||.||        ||||  |||||||.||||||.||.|||||||   |....|||||.|
Sbjct    1  ATGAGGAAAGACGAGCGCGAGCGGGACGCGCC--AGCCATGAGGTCCCCGCCGCCGCCGCCAGCCTCGGCCGCC  72

Query   64  TCGCCCCCCGAGAGTCTGAGGAACGGCTACGTGAAGAGCTGCGTGAGCCCCTTGCGGCAGGACCCTCCGCGCGG  137
            ||||||||||||||.|||.|.|||||||||||||||||||||||||||||..||||||||||||||||||||.|
Sbjct   73  TCGCCCCCCGAGAGCCTGCGCAACGGCTACGTGAAGAGCTGCGTGAGCCCGCTGCGGCAGGACCCTCCGCGCAG  146

Query  138  CTTCTTCTTCCACCTCTGCCACTTCTGCAACGTGGAGCTGCGGCCGCCGCCGGCCTCTCCCCAGCAGCCGCGGC  211
            ||||||||||||||||||||.|||||||||||||||      |||||||.|||||||                 
Sbjct  147  CTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGGA------GCCGCCGGCGGCCTC-----------------  197

Query  212  GCTGCTCCCCCTTCTGCC-GGGCGCGCCTCTCGCTGGGCGCCCTGGCTGCCTTTGTCCTCGCCCTGCTGCTGGG  284
               |||||.|     ||| ||||.|||||||||||.||||.||||||.|||||||||||.|||..|||||||||
Sbjct  198  ---GCTCCGC-----GCCGGGGCACGCCTCTCGCTCGGCGTCCTGGCCGCCTTTGTCCTGGCCGCGCTGCTGGG  263

Query  285  CGCGGAACCCGAGAGCTGGGCTGCCGGGGCCGCCTGGCTGCGGACGCTGCTGAGCGTGTGTTCGCACAGCTTGA  358
            ||||...||||||.|||||||.||||.|||.|||.||||.||||||||||||||||..||.||||.||||.|.|
Sbjct  264  CGCGAGGCCCGAGCGCTGGGCGGCCGCGGCAGCCGGGCTCCGGACGCTGCTGAGCGCCTGCTCGCTCAGCCTCA  337

Query  359  GCCCCCTCTTCAGCATCGCCTGTGCCTTCTTCTTCCTCACCTGCTTCCTCACCCGGACCAAGCGGGGACCCGGC  432
            ||||.||||||||||||||||||||||||||||||||||||||.|||||.||.||..|..||||      ||||
Sbjct  338  GCCCGCTCTTCAGCATCGCCTGTGCCTTCTTCTTCCTCACCTGTTTCCTGACGCGCGCGCAGCG------CGGC  405

Query  433  CCGGGCCGGAGCTGCGGCTCCTGGTGGCTGCTGGCGCTGCCCGCCTGCTGTTACCTGGGGGACTTCTTGGTGTG  506
            ||||||||..||..||||||||||||||||||||||||||||||||||||.||||||||.||||||..||.|||
Sbjct  406  CCGGGCCGCGGCGCCGGCTCCTGGTGGCTGCTGGCGCTGCCCGCCTGCTGCTACCTGGGCGACTTCGCGGCGTG  479

Query  507  GCAGTGGTGGTCTTGGCCTTGGGGGGATGGCGACGCAGGGTCCGCGGCCCCGCACACGCCCCCGGAGGCGGCAG  580
            ||||||||||||.||||...|.|||||                   |||                 ||||||.|
Sbjct  480  GCAGTGGTGGTCGTGGCTGCGTGGGGA-------------------GCC-----------------GGCGGCGG  517

Query  581  CGGGCAGGTTGCTG-CTGGTGCTGAGCTGCGTAGGGCTGCTGCTGACGCTCGCGCACCCGC-TGCGGCTGCGGC  652
            |||||.||.| ||| |||||||||||||||||.||   ||||||||||||||||| ||||| ||.|||||||||
Sbjct  518  CGGGCCGGCT-CTGCCTGGTGCTGAGCTGCGTGGG---GCTGCTGACGCTCGCGC-CCCGCGTGAGGCTGCGGC  586

Query  653  ACTGCGTTCTGGTGCTGCTCCTGGCCAGCTTCGTCTGGTGGGTCTCCTTCACCAGCCTCGGGTCGCTGCCCTCC  726
            ||.||||.||||||||||||.|.|||.||.|.||.||||||||.||||||.||.||||||||.|.|||||..||
Sbjct  587  ACGGCGTCCTGGTGCTGCTCTTCGCCGGCCTGGTGTGGTGGGTGTCCTTCTCCGGCCTCGGGGCTCTGCCGCCC  660

Query  727  GCCCTCAGGCCGCTGCTCTCCGGCCTGGTGGGGGGCGCTGGCTGCCTGCTGGCCCTGGGGTTGGATCACTTCTT  800
            ||.||||||||.|||||.||..|||||||.||||||||.||.||||||||.||||||||.|||||.||||||||
Sbjct  661  GCGCTCAGGCCTCTGCTGTCGTGCCTGGTCGGGGGCGCGGGATGCCTGCTAGCCCTGGGCTTGGACCACTTCTT  734

Query  801  TCAAATCAGGGAAGCGCCTCTTCATCCTCGACT-GTCCAGTGCCGCCGAAGAAAAAGTGCCTGTGATCCGACCC  873
            |||..||.|||.|||..|.|.||..||.|| || |.|.|||.||||.||.||||||||||||||||||.|||||
Sbjct  735  TCACGTCCGGGGAGCCTCCCCTCCGCCGCG-CTCGGCGAGTACCGCGGAGGAAAAAGTGCCTGTGATCAGACCC  807

Query  874  CGGAGGAGGTCCAGCTGCGTGTCGTTAGGAGAAACTGCAGCCAGTTACTATGGCAGTTGCAAAATATTCAGGAG  947
            ||||||||||||||||||||||||.|.|||||||..||||||.||||||||||||||.||||.||.||||||||
Sbjct  808  CGGAGGAGGTCCAGCTGCGTGTCGCTGGGAGAAAGCGCAGCCGGTTACTATGGCAGTGGCAAGATGTTCAGGAG  881

Query  948  ACCGTCGTTGCCTTGTATTTCCAGAGAACAGATGATTCTTTGGGATTGGGACTTAAAACAATGGTATAAGCCTC  1021
            ||||||||||||||||||||||.|||||||||||||.||.|||||.||||||||.||.||.||||.|||.||||
Sbjct  882  ACCGTCGTTGCCTTGTATTTCCCGAGAACAGATGATCCTCTGGGACTGGGACTTGAAGCAGTGGTGTAAACCTC  955

Query 1022  ATTATCAAAATTCTGGAGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGAT  1095
            ||||.||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct  956  ATTACCAGAATTCTGGAGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAAGCTCGCAATATGGTGTCAGAC  1029

Query 1096  CTTCTGACTGATCCAAGCCTTCCACCACAAGTCATTTCCTCTCTACGGAGTATTAGTAGCTTAATGGGTGCTTT  1169
            ||.||||.|||.|||||||||||.||||||||||||||.|||||.||||||||.||||||||.|||||||||||
Sbjct 1030  CTGCTGATTGACCCAAGCCTTCCCCCACAAGTCATTTCTTCTCTGCGGAGTATCAGTAGCTTGATGGGTGCTTT  1103

Query 1170  CTCAGGTTCCTGTAGGCCAAAGATTAATCCTCTCACACCATTTCCTGGATTTTACCCCTGTTCTGAAATAGAGG  1243
            ||||||||||||||||||||||||||||.||.|.||||||||||||||||||||.|||||.||||||.||||.|
Sbjct 1104  CTCAGGTTCCTGTAGGCCAAAGATTAATTCTTTTACACCATTTCCTGGATTTTATCCCTGCTCTGAAGTAGAAG  1177

Query 1244  ACCCAGCTGAGAAAGGGGATAGAAAACTTAACAAGGGACTAAAT---AGGAATAGTTTGCCAACTCCACAGCTG  1314
            |.||||.|||||||||.|||.||||||||.||||||||.|.|.|   ||.|..|||||.|||||||||||||||
Sbjct 1178  ATCCAGTTGAGAAAGGAGATCGAAAACTTCACAAGGGATTGAGTGGCAGAACCAGTTTCCCAACTCCACAGCTG  1251

Query 1315  AGGAGAAGCTCGGGAACTTCAGGATTGCT-ACCTGTTGAACAGTCTTCAAGGTGGGATCGTAATAATGGCAAAA  1387
            |||||.|||||.|||.|.|||...||||| ||                               |||||     |
Sbjct 1252  AGGAGGAGCTCTGGAGCCTCATCGTTGCTGAC-------------------------------TAATG-----A  1289

Query 1388  GGCCTCACCAAGAATTTGGCATTTCAAGTCAAGGATGCTATCTAAATGGGCCTTTTAATTCAAATCTACTGACT  1461
            |    |||        ||    |||||||||.||||||.|.||||||||||||||||.|||||||||..|.||.
Sbjct 1290  G----CAC--------TG----TTCAAGTCATGGATGCCACCTAAATGGGCCTTTTAGTTCAAATCTTTTTACA  1347

Query 1462  ATCCCGAAGCAAAGGTCATCTTCTGTATCACTGACTCACCATGTAGGTCTCAGAAGAGCTGGTGTTTTGTCCAG  1535
            ||.||.|||||.||||||||.|||||.||||||||.|||||||.||||||.|||||||||||||.||||.||||
Sbjct 1348  ATTCCAAAGCAGAGGTCATCGTCTGTGTCACTGACGCACCATGCAGGTCTGAGAAGAGCTGGTGCTTTGCCCAG  1421

Query 1536  TCTGAGTCCTGTGAATTCTTCCAACCATGGACCAGTGTCTACTGGCTCTCTAACTAATCGATCACCCATAGAAT  1609
            .|..||||.|.||||||||||.|.|||||.||||||||||.||||||||||||||||||||||||||||||.||
Sbjct 1422  CCACAGTCTTCTGAATTCTTCAAGCCATGTACCAGTGTCTGCTGGCTCTCTAACTAATCGATCACCCATAGGAT  1495

Query 1610  TTCCTGATACTGCTGATTTTCTTAATAAGCCAAGCGTTATCTTGCAGAGATCTCTGGGCAATGCACCTAATACT  1683
            ||||||||||..||||||||||||.||||||||...||||.||.||.|||||.|||||||.||.|.|.|.|.|.
Sbjct 1496  TTCCTGATACCACTGATTTTCTTACTAAGCCAAATATTATTTTACATAGATCACTGGGCAGTGTATCAAGTGCA  1569

Query 1684  CCAGATTTTTATCAGCAACTTAGAAATTCTGATAGCAATCTGTGTAACAGCTGTGGACATCAAATGCTGAAATA  1757
            .|||||||..|||||.|.|||||.||.|||||.|||||||||||||.||||||||||||.|||||.||.|||||
Sbjct 1570  GCAGATTTCCATCAGTACCTTAGGAACTCTGACAGCAATCTGTGTAGCAGCTGTGGACACCAAATACTCAAATA  1643

Query 1758  TGTTTCAACATCTGAATCAGATGGTACAGATTGCTGCAGTGGAAAATCAGGTGAAGAAGAAAACA---TTTTCT  1828
            |||||||||||.||||.|.|||||||||||...|..|||||.||||||||||||||||||.|.||   ||||||
Sbjct 1644  TGTTTCAACATGTGAACCCGATGGTACAGACCACCCCAGTGAAAAATCAGGTGAAGAAGACAGCAGTGTTTTCT  1717

Query 1829  CGAAAGAATCATTCAAACTTATGGAAACTCAACAAGAAGAGGAAACAGAGAAGAAAGACAGCAGAAAATTATTT  1902
            |.||||||.||||.||..||.|||||||.|||.||||||||   ||...||||||||.|.||||..|.||||||
Sbjct 1718  CAAAAGAACCATTGAACATTGTGGAAACCCAAGAAGAAGAG---ACCATGAAGAAAGCCTGCAGGGAGTTATTT  1788

Query 1903  CAGGAAGGTGATAAGT-GGCTAACAGAAGAGGCACAGAGTGAACAGCAAACAAATATTGAACAGGAAGTATCAC  1975
            ..|||||||||| ||| ..||.|..||||||||         |||||||.|||||||.||.||||||||.||||
Sbjct 1789  TTGGAAGGTGAT-AGTCACCTGATGGAAGAGGC---------ACAGCAACCAAATATCGATCAGGAAGTGTCAC  1852

Query 1976  TGGACCTGATTTTAGTAGAAGAGTATGACTCATTAATAGAAAAGATGAGCAACTGGAATTTTCCAATTTTTGAA  2049
            ||||.|..||.|||||||||||.|||||.|||||||||||||||||||.||||||||||||||..||||||||.
Sbjct 1853  TGGATCCAATGTTAGTAGAAGATTATGATTCATTAATAGAAAAGATGAACAACTGGAATTTTCAGATTTTTGAG  1926

Query 2050  CTTGTAGAAAAGATGGGAGAGAAATCAGGAAGGATTCTCAGTCAGGTTATGTATACCTTATTTCAAGACACTGG  2123
            ||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||
Sbjct 1927  CTTGTAGAAAAGATGGGAGAAAAATCAGGAAGGATTCTCAGTCAGGTTATGTATACTTTATTTCAAGATACTGG  2000

Query 2124  TTTATTGGAAATATTTAAAATTCCCACTCAACAATTTATGAACTATTTTCGTGCATTAGAAAATGGCTATCGAG  2197
            |||||||||||.|||||||||||||||||||.||||||||||.|||||||||||.||||||||||||||.||.|
Sbjct 2001  TTTATTGGAAACATTTAAAATTCCCACTCAAGAATTTATGAATTATTTTCGTGCCTTAGAAAATGGCTACCGGG  2074

Query 2198  ACATTCCTTATCACAATCGTATACATGCCACAGATGTGCTACATGCAGTTTGGTATCTGACAACACGGCCAGTT  2271
            |||||||.||||||||||||.|.||||||||||||||.||||||||.|||||||||.|||||||.||.|||.||
Sbjct 2075  ACATTCCATATCACAATCGTGTGCATGCCACAGATGTCCTACATGCTGTTTGGTATTTGACAACCCGACCAATT  2148

Query 2272  CCTGGCTTACAGCAGATCCACAATGGTTGTGGAACAGGAAATGAAA-CAGATTCTGATGGTAGAATTAACCATG  2344
            ||||||||||..||||||||.|||.....||.||| |||||..||| |||||||.|||||||||.||.....||
Sbjct 2149  CCTGGCTTACCTCAGATCCATAATAACCATGAAAC-GGAAACCAAAGCAGATTCAGATGGTAGACTTGGTTCTG  2221

Query 2345  GGCGAATTGCTTATATTTCTTCGAAGAGCTGCTCTAATCCTGATGAGAGTTATGGCTGCCTGTCTTCAAACATT  2418
            |.|..||||||||.||||||||||||||.||||.||.|||.|||..|||||||||||||||.|||||||||||.
Sbjct 2222  GACAGATTGCTTACATTTCTTCGAAGAGTTGCTGTATTCCAGATATGAGTTATGGCTGCCTATCTTCAAACATC  2295

Query 2419  CCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCATGCATGATTATGATCACCCAGGGAGGACAAATGC  2492
            |||||||||||||||||||||.|.||.|||||||||||||||||.|||||.|||||||||||.||.||||||||
Sbjct 2296  CCTGCATTAGAATTGATGGCTTTGTATGTGGCAGCTGCCATGCACGATTACGATCACCCAGGAAGAACAAATGC  2369

Query 2493  ATTTCTAGTGGCTACAAATGCCCCTCAGGCAGTTTTATACAATGACAGATCTGTTCTGGAAAATCATCATGCTG  2566
            .||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 2370  GTTTCTAGTGGCTACAAATGCACCTCAGGCAGTTTTATACAATGACAGATCTGTTCTAGAGAATCATCATGCTG  2443

Query 2567  CGTCAGCTTGGAATCTATATCTTTCTCGCCCAGAATACAACTTCCTTCTTCATCTTGATCATGTGGAATTCAAG  2640
            |.||||||||||||||.|||||||||||||||||.|||||||||||.|||.|.||||||||..|||||||||||
Sbjct 2444  CATCAGCTTGGAATCTGTATCTTTCTCGCCCAGAGTACAACTTCCTCCTTAACCTTGATCACATGGAATTCAAG  2517

Query 2641  CGCTTTCGTTTTTTAGTCATTGAAGCAATCCTTGCTACGGATCTTAAAAAGCATTTTGATTTTCTCGCAGAATT  2714
            ||.|||||.||||||||.||.|||||||||||||||||.|||||.|||||.|||||||||||.||.||||||||
Sbjct 2518  CGGTTTCGATTTTTAGTTATAGAAGCAATCCTTGCTACAGATCTCAAAAAACATTTTGATTTCCTTGCAGAATT  2591

Query 2715  CAATGCCAAGGCAAATGATGTAAATAGTAATGGCATAGAATGGAGTAATGAAAATGATCGCCTCTTGGTATGCC  2788
            ||||||||||||.|||||||||||||||||.||.|||||||||||.|.||||||.||||||||||||||.||||
Sbjct 2592  CAATGCCAAGGCCAATGATGTAAATAGTAACGGTATAGAATGGAGCAGTGAAAACGATCGCCTCTTGGTCTGCC  2665

Query 2789  AGGTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCATTTGAAATGGACAGAAGGC  2862
            ||||||||||||||.|.||||||||.||||||||||||||||.|||.|||.|.|||||||.|||||||||||||
Sbjct 2666  AGGTGTGCATCAAATTAGCAGATATCAATGGCCCAGCAAAAGATCGGGACCTACATTTGAGATGGACAGAAGGC  2739

Query 2863  ATTGTCAATGAATTTTATGAGCAGGGAGATGAAGAAGCAAATCTTGGTCTGCCCATCAGTCCATTCATGGATCG  2936
            |||||.||||||||||||||||||||||||||||||||||..||.|||||.||.||.|||||.|||||||||||
Sbjct 2740  ATTGTGAATGAATTTTATGAGCAGGGAGATGAAGAAGCAACCCTGGGTCTACCTATTAGTCCCTTCATGGATCG  2813

Query 2937  TTCTTCTCCTCAACTAGCAAAACTCCAAGAATCTTTTATCACCCACATAGTGGGTCCCCTGTGTAACTCCTATG  3010
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.||||||||||
Sbjct 2814  TTCTTCTCCTCAACTAGCAAAACTCCAAGAATCTTTTATCACCCACATTGTGGGCCCCCTGTGCAACTCCTATG  2887

Query 3011  ATGCTGCTGGTTTGCTACCAGGTCAGTGGTTAGAAGCAGAAGAGGATAATGATACTGAAAGTGGTGATGATGAA  3084
            ||||||||||.|||||.||.|||||||||.|||||.|||||||||.|.|||||||.|||||||.|||||||||.
Sbjct 2888  ATGCTGCTGGCTTGCTGCCGGGTCAGTGGATAGAAACAGAAGAGGGTGATGATACAGAAAGTGATGATGATGAT  2961

Query 3085  GA---------------CGGTGAAGAATTAGATACAGAAGATGAAGAAATGGAAAACAATCTAAATCCAAAACC  3143
            ||               .|||||||||||||||.||||.||||||||||..|||.|||||||||||||.|||||
Sbjct 2962  GATGATGATGATGGTGGTGGTGAAGAATTAGATTCAGATGATGAAGAAACAGAAGACAATCTAAATCCTAAACC  3035

Query 3144  ACCAAGAAGGAAAAGCAGACGGCGAATATTTTGTCAGCTAATGCACCACCTCACTGAAAACCACAAGATATGGA  3217
            ||.||||||||||.||||.||||||||||||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 3036  ACAAAGAAGGAAAGGCAGGCGGCGAATATTTTGCCAACTAATGCACCACCTCACTGAAAACCACAAGATATGGA  3109

Query 3218  AGGAAATC---GTAGAGGAAGAAGAAAAATGTAAAGCTGATGGGAATAAACTGCAGGTGGAGAATTCCTCCTTA  3288
            ||||||||   |.|||.|||||||||||||||||||||||.|||||.||||||||||||||.|||.||||||||
Sbjct 3110  AGGAAATCATAGAAGAAGAAGAAGAAAAATGTAAAGCTGAGGGGAACAAACTGCAGGTGGATAATGCCTCCTTA  3183

Query 3289  CCTCAAGCAGATGAGATTCAGGTAATTGAAGAGGCAGATGAAGAGGAA---------------  3336
            |||||.|||||||||||||||||.||||||||.|||||||||||||||               
Sbjct 3184  CCTCAGGCAGATGAGATTCAGGTTATTGAAGAAGCAGATGAAGAGGAAGAACAAATGTTTGAA  3246

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