Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06849
Subject:
NM_019711.2
Aligned Length:
1233
Identities:
991
Gaps:
96

Alignment

Query    1  ATGCTGCTATCCGTGACTTCCAGGCCCGGGATTTCGACTTTTGGCTACAATAGAAACAACAAGAAGCCATATGT  74
            |||||||||||.||||||||||||||.||||||||||||||||||||.||.|..|||||||||||||.||||| 
Sbjct    1  ATGCTGCTATCAGTGACTTCCAGGCCTGGGATTTCGACTTTTGGCTATAACAAGAACAACAAGAAGCTATATG-  73

Query   75  GTCACTGGCTCAGCAGATGGCACCACCTAGCCCAAGCAACAGTACACCTAACAGCAGTAGTGGA----------  138
                 ||||||||||.||||||||.||.||.|||||.||.||.||.||.||||||||..|.|||          
Sbjct   74  -----TGGCTCAGCAAATGGCACCTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCGGCGGAGGCGGCGGCG  142

Query  139  --AGCAATGGAAATGACCAGCTGAGCAAAACCAACCTATACATCCGAGGATTGCAACCAGGCACTACTGACCAA  210
              ||...|||.||.|||||||||||||||||||||||.||.|||||||||.||||.||||||||.||||||||.
Sbjct  143  GGAGTGGTGGGAACGACCAGCTGAGCAAAACCAACCTGTATATCCGAGGACTGCAGCCAGGCACCACTGACCAG  216

Query  211  GATCTTGTCAAGCTGTGTCAGCCATATGGCAAGATTGTTTCCACTAAGGCCATACTGGACAAGACCACAAACAA  284
            ||.|||||||||||.||||||||.||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct  217  GACCTTGTCAAGCTCTGTCAGCCGTATGGCAAGATTGTCTCCACTAAGGCCATCCTGGACAAGACCACAAACAA  290

Query  285  ATGTAAAGGCTATGGCTTTGTAGATTTTGACAGCCCTTCAGCAGCACAGAAAGCTGTAACAGCACTGAAGGCCA  358
            .||.|||||||||||||||||.||.||.|||||.||.|||.|||||||||||||||||||.||||||||.||||
Sbjct  291  GTGCAAAGGCTATGGCTTTGTGGACTTCGACAGTCCGTCATCAGCACAGAAAGCTGTAACTGCACTGAAAGCCA  364

Query  359  GCGGTGTACAGGCACAGATGGCAAAGCAACAGGAACAGGACCCCACAAATTTATACATCTCAAACCTCCCACTG  432
            |.|||||.||||||||.|||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.|||
Sbjct  365  GTGGTGTGCAGGCACAAATGGCAAAGCAACAGGAGCAAGACCCTACAAACTTATACATCTCAAACCTCCCTCTG  438

Query  433  TCAATGGATGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAGGTTATCTCCACCCGTATCCTTCGAGA  506
            ||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||.||.||.|||||||||||
Sbjct  439  TCAATGGACGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAGGTCATCTCTACTCGGATCCTTCGAGA  512

Query  507  TACCAGTGGGACCAGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACAGAGAAGTGTGAAGCCATCATCACCC  580
            .||.||||||.||||||||||.||.||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct  513  CACTAGTGGGGCCAGCAGAGGGGTCGGCTTTGCAAGGATGGAGTCAACAGAGAAGTGTGAAGCCATCATCACCC  586

Query  581  ACTTTAATGGAAAATATATTAAGACACCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTTTGCAAATTTGCT  654
            |||||||||||||.|||||.||||||||||||||||||.||||.||.||.||.||.||||||||||||||||||
Sbjct  587  ACTTTAATGGAAAGTATATAAAGACACCCCCTGGAGTAGCAGCACCTTCTGACCCTTTGCTTTGCAAATTTGCT  660

Query  655  GATGGCGGGCCAAAGAAACGACAGAACCAAGGAAAATTTGTGCAAAATGGACGGGCTTGGCCAAGGAATGCAGA  728
            ||.||.|||||||||||||||||||.||||||||.||..|||||||||||||||||.|||||||||||.|.|||
Sbjct  661  GACGGTGGGCCAAAGAAACGACAGAGCCAAGGAAGATACGTGCAAAATGGACGGGCCTGGCCAAGGAACGGAGA  734

Query  729  CATGGGCGTCATGGCCTTGACCTATGACCCCACCACAGCTCTTCAGAATGGGTTTTACCCAGCCCCCTATAACA  802
            ||||||||..|||||||||||||||||||||||..|.||.||||||||||||||.|||.||||.||.||.|..|
Sbjct  735  CATGGGCGGTATGGCCTTGACCTATGACCCCACTGCTGCCCTTCAGAATGGGTTCTACGCAGCTCCTTACAGTA  808

Query  803  TCACCCCCAACAGGATGCTTGCTCAGTCTGCACTCTCCCCATACCTTTCCTCTCCTGTGTCTTCGTATCAGAGA  876
            ||.|||.||.|||||||||||||||.|||||.||..||||.||.|||.|.||||||||||||||.||||||   
Sbjct  809  TCGCCCACAGCAGGATGCTTGCTCAATCTGCGCTAGCCCCGTATCTTCCATCTCCTGTGTCTTCCTATCAG---  879

Query  877  GTGACTCAGACATCTCCTCTACAAGTACCTAACCCATCCTGGATGCACCACCATTCATACCTCATGCAGCCTTC  950
                                                                                      
Sbjct  880  --------------------------------------------------------------------------  879

Query  951  AGGTTCAGTTCTGACACCAGGGATGGACCATCCCATTTCTCTCCAGCCTGCCTCCATGATGGGACCCCTTACCC  1024
             ||.||||||||||||||||||||||||||.|||.|.|||||||||||||||||||||||||||||.|||||||
Sbjct  880  -GGCTCAGTTCTGACACCAGGGATGGACCACCCCCTCTCTCTCCAGCCTGCCTCCATGATGGGACCTCTTACCC  952

Query 1025  AGCAACTGGGCCATCTCTCCCTCAGCAGCACAGGCACGTATATGCCGACGGCTGCAGCTATGCAAGGAGCTTAC  1098
            ||||||||||.||.||.||.||||.|||....|||||||..||||||.|.|||||.||||||||.||.||||||
Sbjct  953  AGCAACTGGGTCACCTGTCACTCAACAGTCTGGGCACGTTCATGCCGGCAGCTGCTGCTATGCATGGGGCTTAC  1026

Query 1099  ATCTCCCAGTACACCCCTGTGCCTTCTTCCAGTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACCAAGTGGC  1172
            ||||||||||||.|..||||||||||||||||||||||.|..||||||||||..|||||.|||||.|||.||||
Sbjct 1027  ATCTCCCAGTACCCAGCTGTGCCTTCTTCCAGTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATCAACTGGC  1100

Query 1173  AGTGGACGCACCCTCAGAGCATGGGGTCTATTCTTTCCAGTTCAACAAG  1221
            ||||||..|.||||||||.||.|||||||||.||||||||||||.|||.
Sbjct 1101  AGTGGAGCCCCCCTCAGACCACGGGGTCTATCCTTTCCAGTTCAGCAAA  1149

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