Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06926
Subject:
NR_003264.2
Aligned Length:
2595
Identities:
1901
Gaps:
608

Alignment

Query    1  ---------------------ATGTCGGGGGTCCGGGGCCTGTCGCGGCTGCTGAGCGCTCGGCGC------CT  47
                                 .||||||||||||||||||||||||||.|||..||||||||||||      ||
Sbjct    1  TGCGCGGCGGCGACTACAGACGTGTCGGGGGTCCGGGGCCTGTCGCGGTTGCCAAGCGCTCGGCGCCTGGCGCT  74

Query   48  GGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACA  121
            |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||| .|||||.
Sbjct   75  GGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACG  147

Query  122  AGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTG  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  AGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTG  221

Query  196  GTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTG  268
            ||||||||||||||||||||.||| |||||||||||||||||||||||.|||||||.||||.||||||||||||
Sbjct  222  GTGGTAGGCGCTGGAGGGGCCGGCTTTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTG  295

Query  269  TTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCACAGGGAGGAATCAATGCTGCTCTGGGGAACATG  342
            ||||||||||||||||||||||||||||||||||||||||.||||..|||||||||||||||||||||||||||
Sbjct  296  TTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTTGGAATCAATGCTGCTCTGGGGAACATG  369

Query  343  GAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCAT  416
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  GAGGAGGACAACTGGAGGTGGCATTTCTATGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCAT  443

Query  417  CCACTACATGACGGAGCAGGCCCCCGCCGCCGTGGTCG------------------------------------  454
            |||||||.|||||||||||||||||.|.|||.||||||                                    
Sbjct  444  CCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGCGGTGATGGGCGGGAGGCTCTGGGTGCTCTGGTGGT  517

Query  455  ----------------------------------AGC--------------------------------TAGAA  462
                                              |||                                |||||
Sbjct  518  CTGTTTCTAGTACAAGAGTCCTGGAAAAAATGTAAGCAGTTGAGGCAGATGTGGCAGCCGAAAGAATGGTAGAA  591

Query  463  AATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAA  536
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||
Sbjct  592  AATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACACAGCCTCAA  665

Query  537  GTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACTGGCCACTCGCTATTGCACACCT  610
            |||||||||||||||||||||||||.|||||||||||||||||||||||||.||||||||..||||||||||||
Sbjct  666  GTTTGGAAAGGGCGGGCAGGCCCATGGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCT  739

Query  611  TATATGGAAGGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAAT  684
            ||||.||.|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  740  TATACGGGAGGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAAT  813

Query  685  GGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGT  758
            ||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||||.|||.|
Sbjct  814  GGGGAGTGCCGTGGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAAGAATACTAT  887

Query  759  TGTTGCCACAGGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACTGGCGACGGCACGG  832
            |||||||||||  ||||||.||||||.||||||.||||||||||||||||||||||||||..||||||||||||
Sbjct  888  TGTTGCCACAG--GGCTACTGGCGCAACTACTTGAGCTGCACGTCTGCCCACACCAGCACCAGCGACGGCACGG  959

Query  833  CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGCATATATGGT  906
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||
Sbjct  960  CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGCACATATGGT  1033

Query  907  GCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTAT  980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034  GCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTAT  1107

Query  981  GGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCC  1054
            |||||||||||||||..|||||||||||||||||||||||||||||||||||||||..||||||||||||||||
Sbjct 1108  GGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCC  1181

Query 1055  GAGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTG  1128
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182  GCGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTG  1255

Query 1129  GCCACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTCGCTGGCGTGGACGTCACGAAGGAGCCGATCCC  1202
            ||||.||.|.||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1256  GCCATGCCCTTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCGATCCC  1329

Query 1203  TGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGAGGCACGTGA  1276
            |||||||||||||||||||||||||||||.||||||||||||||.||||.|||||||||||||||||||||.||
Sbjct 1330  TGTCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTCCTGAGGCACGGGA  1403

Query 1277  ATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAAC  1350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||||.||||
Sbjct 1404  ATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCTGCACATGGTGTCAAC  1477

Query 1351  CGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATG  1424
            ||||||||||||||||||||.|||||||||||||||  |||||.||||||||||||||||||||.||||||.||
Sbjct 1478  CGCCTCGGGGCAAACTCGCTATTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTG  1549

Query 1425  CAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGA  1498
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||.||||||||||||
Sbjct 1550  CAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATGTTGACAAATTGA  1623

Query 1499  GATTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAG------------------  1551
            ||||||||||||   |||||||||||||||||||||||||||||||||||||||||                  
Sbjct 1624  GATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGGGCTGCTGGCTCGTGTCA  1697

Query 1552  --------------------------------------------------------------------------  1551
                                                                                      
Sbjct 1698  CGTTCACCACCAGACCCCACATCAGGAGTCCCGCCAGGGGTGTGGGGAGGCAGCGCTGCCTGGTTGGCCGTGGA  1771

Query 1552  --------------------------------------------------------------------------  1551
                                                                                      
Sbjct 1772  GCCGTATGGAACATGGTGCCTCACAGGCAGTCTGCTTGGCGTCCTGGATCCTGGCTGTATCCCGCTGGAAAGGA  1845

Query 1552  -TCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGC  1624
             ||||.||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1846  TTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGC  1919

Query 1625  TCTATGGAGACCTAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTG  1698
            |||||||||||||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920  TCTATGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTG  1993

Query 1699  GAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCGC  1772
            ||||||||||||||||||||.|||||||||||||||.||.|.|||||||||||..|||||||||||||||||||
Sbjct 1994  GAGCTGCAGAACCTGATGCTATGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGGGGAAGGAGTCACGGGGCGC  2067

Query 1773  GCATGCCAGGGAAGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGA  1846
            |||.|||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 2068  GCACGCCGGGGAAGACTACAAGGTGCGGATTGATGAGTACGATCACTCCAAGCCCATCCAGGGGCAACAGAAGA  2141

Query 1847  AGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTTGGCACTGGGAAGGTCACTCTGGAA  1920
            |||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||||||.|||||
Sbjct 2142  AGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCACTGTGGAA  2215

Query 1921  TATAGACCCGTGATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCGCCAGCCATTCGCTCCTAC--  1992
            |||||||||.|.|||||||||||||||||.|||||||||||||||||.|||||.||||||||||.|||||||  
Sbjct 2216  TATAGACCCATAATCGACAAAACTTTGAATGAGGCTGACTGTGCCACTGTCCCCCCAGCCATTCACTCCTACTG  2289

Query 1993  --------------------------------------------------------------------------  1992
                                                                                      
Sbjct 2290  ATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTTGCACAGCCAGAGAACAACACATCACACACAAGAAACA  2363

Query 1993  --------------------------------------------------------------------------  1992
                                                                                      
Sbjct 2364  GTTGTGCTCATGTGATGGGGGCCTCAGCACTAGGAAGGAGTGGACTGTTGGCGCACGCAGCAGCTTGAATAAAT  2437

Query 1993  --------------------------------------------------------------------------  1992
                                                                                      
Sbjct 2438  CTGAAAGTCACTACGCTGCGTAAGAGAAGCCAAATAAAGCGCATGCTGTGTACAAAAAAAAAAAAAAAAAAAAA  2511

Query 1993  --------------------------------------------------------------------------  1992
                                                                                      
Sbjct 2512  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  2585

Query 1993  -----  1992
                 
Sbjct 2586  AAAAA  2590

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