Nucleotide Global Alignment

Description

Query:
ccsbBroad304_06926
Subject:
NR_003265.3
Aligned Length:
2326
Identities:
1890
Gaps:
341

Alignment

Query    1  ----------------------------------------------------------ATGTCGGGGGTCCGGG  16
                                                                      .|||||||||||||||
Sbjct    1  GGTGCGCAGGCGCAGTCTGCGCAGGGACTGGCGGGACTGCGCGGCGGCGACTACAGACGTGTCGGGGGTCCGGG  74

Query   17  GCCTGTCGCGGCTGCTGAGCGCTCGGCGC------CTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACA  84
            |||||||||||.|||..||||||||||||      |||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCCTGTCGCGGTTGCCAAGCGCTCGGCGCTTGGCGCTGGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACA  148

Query   85  GGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGC  158
            ||||||||||||.|||||||||||||||| .|||||.|||||||||||||||||||||||||||||||||||||
Sbjct  149  GGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACGAGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGC  221

Query  159  TCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCA  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  222  TCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTTGCGAGCTGCA  295

Query  232  TTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGC  305
            |||||||||||.|||||||.||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  TTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGC  369

Query  306  AGCACAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCG  379
            |||.||||..||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  370  AGCGCAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACCG  443

Query  380  TGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACGGAGCAGGCCCCCGCCGCCGTGGTC  453
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|.|||.|||||
Sbjct  444  TGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTC  517

Query  454  GAGCTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACA  527
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  518  GAGGTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACA  591

Query  528  GAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACTGGCCACTCGCTAT  601
            .|||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||..|||
Sbjct  592  CAGCCTCAAGTTTGGAAAGGGCAGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATAT  665

Query  602  TGCACACCTTATATGGAAGGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTG  675
            ||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  666  TGCACACCTTATATGGGAGGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTG  739

Query  676  ATGGAGAATGGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAA  749
            |||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  740  ATGGAGAATGGGGAGTGCCGTGGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAA  813

Query  750  GAACACTGTTGTTGCCACAGGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACTGGCG  823
            |||.|||.||||||||||||  ||||||||||||||||||||.||||||||||||||||||||||||||..|||
Sbjct  814  GAATACTATTGTTGCCACAG--GGCTACGGGCGCACCTACTTGAGCTGCACGTCTGCCCACACCAGCACCAGCG  885

Query  824  ACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGC  897
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  886  ACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGC  959

Query  898  ATATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGA  971
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  960  ACATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGA  1033

Query  972  AAGGTTTATGGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCCATGACTC  1045
            ||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||..|||||||
Sbjct 1034  AAGGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTC  1107

Query 1046  TGGAGATCCGAGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCA  1119
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108  TGGAGATCCGCGAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCA  1181

Query 1120  GAGCAGCTGGCCACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTCGCTGGCGTGGACGTCACGAAGGA  1193
            |||||||||||||.||.|.||||.||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1182  GAGCAGCTGGCCATGCCCTTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGA  1255

Query 1194  GCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGA  1267
            ||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||.|||||||||||||||
Sbjct 1256  GCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTCCTGA  1329

Query 1268  GGCACGTGAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACAT  1341
            ||||||.|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||.|.||||
Sbjct 1330  GGCACGGGAATGGCCAGGATCAGATTGTGCCCAGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCTGCACAT  1403

Query 1342  GGTGCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGA  1415
            ||||.||||||||||||||||||||||||.|||||||||||||||  |||||.||||||||||||||||||||.
Sbjct 1404  GGTGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGC  1475

Query 1416  AGAGTCATGCAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTG  1489
            ||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||||||
Sbjct 1476  AGAGTCGTGCAGGCCTGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTG  1549

Query 1490  ACAAATTGAGATTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAATGCAA  1560
            |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1550  ACAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGTCAACGCAA  1623

Query 1561  AATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGA  1634
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1624  AATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTCTATGGAGA  1697

Query 1635  CCTAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGAGCTGCAGA  1708
            |||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1698  CCTGAAGCATCTGAAGACGTTTGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGAGCTGCAGA  1771

Query 1709  ACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCGCGCATGCCAGG  1782
            ||||||||||.|||||||||||||||.||.|.|||||||||||..||||||||||||||||||||||.|||.||
Sbjct 1772  ACCTGATGCTATGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGGGGAAGGAGTCACGGGGCGCGCACGCCGGG  1845

Query 1783  GAAGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGA  1856
            ||||||||||||||||.||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1846  GAAGACTACAAGGTGCAGATTGATGAGTATGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGA  1919

Query 1857  GGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTTGGCACTGGGAAGGTCAC-TCTGGA-------ATA  1922
            ||.||||||||||||||||||||||||||||||||||||.||||||||||||..||| .|..||       |.|
Sbjct 1920  GGTGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCGGCACTGGGAAGTGCACAGCCAGAGGACAACACA  1993

Query 1923  T--------AGA------------CCCGTGAT-----CGACAAAACTTTGAACGAGGCT-GACTGT--GC-CAC  1967
            |        |||            |..|||||     |..||..|||..|||.|||  | ||||||  || |||
Sbjct 1994  TCACACACAAGAAACAGTTGTGCTCATGTGATGGGGGCCTCAGCACTAGGAAGGAG--TGGACTGTTGGCGCAC  2065

Query 1968  -----------------------CGTCCC-----------------GCC------AGC-CAT------------  1982
                                   .|||.|                 |||      ||| |||            
Sbjct 2066  GCAGCAGCTTGAATAAATCTGAAAGTCACTACGCTGCGTAAGAGAAGCCAAATAAAGCGCATGCTGTGTACAGA  2139

Query 1983  -----TCG-------CTCCTAC----------------------------------------------------  1992
                 |||       |||||||                                                    
Sbjct 2140  GGGTGTCGAGAATGCCTCCTACGTGACGGAAAGCAGATCCGTGGTTCCCTGCAGACTGGCAGGAGCAGATTCCA  2213

Query 1993  --------------------------------------------------------------------------  1992
                                                                                      
Sbjct 2214  AAGGCACAGGAAGAAGCTTGCAGGTAGAATGTGTTCATTACCTTCTGCGCATTATACCACAAAAAAGCTGGGAA  2287

Query 1993  --------------------------------  1992
                                            
Sbjct 2288  TAAAAATGCTAACCAAAAAAAAAAAAAAAAAA  2319

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