Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07005
Subject:
XM_011241946.2
Aligned Length:
3488
Identities:
2178
Gaps:
1048

Alignment

Query    1  ATGGCCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCT  74
            |||.|||||||||||||||||||.|||||||||||.||.|||.|.||.||||||||.||||||||||.|||.||
Sbjct    1  ATGACCATGACTGCCAACAAGAACTCCAGCATCACTCATGGAACCGGAGGCACTAAGGCCCCTCGGGAGACGCT  74

Query   75  GAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTCTCTCCCCACCAAGGAGTCCCATCTACCCGCTCAGTGATA  148
            ||||||||||||||||||||||||||||||||||.|.|.|||||||||.||||||||||||||.||||||||.|
Sbjct   75  GAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTTTATACCCACCAAGAAGTCCCATCTACCCACTCAGTGACA  148

Query  149  GTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCCAGCTCCCGGGTGCTCCTCAAGGACCGGCACCCCCCAGCT  222
            ||||||||||||||||||||||||||||||||||.|..||||.|||||||||||||||||||||..|.|.|..|
Sbjct  149  GTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCTAAATCCCAGGTGCTCCTCAAGGACCGGCATTCTCGAAAT  222

Query  223  CCTTCAC-CCCAGAATCCTCAAGATCCCTCCCCAGATACTTCCCCACCCACCTGTCCCTTCAAGACCGCCAGCT  295
            ||||||| ||.||    .|||||||||.||||||||.||.||.|||||||..|||.||.|||||.|..||||||
Sbjct  223  CCTTCACTCCTAG----GTCAAGATCCGTCCCCAGAAACCTCACCACCCATTTGTACCCTCAAGGCTACCAGCT  292

Query  296  TCGGTTATTTGGACAGAAGCCCTTCGGCGTGCAAGAGAGACGCCCAAAAGGAAAGTGTCCAAGGCGCAGCCCAG  369
            ||.|.|||||||||||||.||||||.....||||.|||||.|.|||.|||||.|.||||||.||.||||.||||
Sbjct  293  TCAGCTATTTGGACAGAACCCCTTCATTACGCAAAAGAGAGGACCAGAAGGAGACTGTCCAGGGTGCAGTCCAG  366

Query  370  GATGTAGCAGGGGTCGCTGCCTGCCTCCCCCTTGCCCAGAGCACGCCATTCC-CGGGGCCAGCAGCTGGCCCCC  442
            |||||||.|||.||.|||||.|||||||||||||||||||||||.||||||| .||||||       ||..|.|
Sbjct  367  GATGTAGAAGGTGTGGCTGCTTGCCTCCCCCTTGCCCAGAGCACCCCATTCCTAGGGGCC-------GGGTCTC  433

Query  443  GGGGCGTCTTGCTGACCCGTACCGGTACCCGCGCCCACAGCCTGGGCATCCGGGAGAAGATATCAGCATGGGAA  516
            ||.|.||||||||||...|.||.||||||||.|||||.||||||||.|||||.||||||||.||||||||||||
Sbjct  434  GGAGTGTCTTGCTGAGTTGCACTGGTACCCGAGCCCATAGCCTGGGTATCCGAGAGAAGATCTCAGCATGGGAA  507

Query  517  GGTCGCCGAGAGGCGTCGCCCAGGATGAGCATGTGTGGAGAGAAGCGGGAGGGCTCTGGGAGCGAGTGGGCGGC  590
            ||||||||||||||.||.|||||||||||..|||||||||||||||||||||||.||||||||||||||.|||.
Sbjct  508  GGTCGCCGAGAGGCTTCACCCAGGATGAGTCTGTGTGGAGAGAAGCGGGAGGGCCCTGGGAGCGAGTGGTCGGT  581

Query  591  CAGTGAGGGCTGCCCCAGCCTGGGCTGTCCCAGCGTGGTGCCGTCCCCCTGCAGCTCTGAAAAGACCTTTGATT  664
            ||||||||||||||||||..|||||||.|||||.||||||||.||||||||||||||.||||||||||||||||
Sbjct  582  CAGTGAGGGCTGCCCCAGTGTGGGCTGCCCCAGTGTGGTGCCATCCCCCTGCAGCTCAGAAAAGACCTTTGATT  655

Query  665  TCAAGGGCCTCCGGAGGATGAGCAGGACCTTCTCCGAGTGTTCCTACCCAGAGACTGAGGAGGAGGGAGAGGCG  738
            ||||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||||||||||.||||||.
Sbjct  656  TCAAAGGCCTCCGGAGGATGAGCAGGACCTTCTCTGAGTGTTCCTACCCCGAGACAGAGGAGGAGGCAGAGGCA  729

Query  739  CTCCCTGTCCGGGACTCTTTCTACCGGCTGGAGAAACGGCTGGGCCGGAGTGAGCCCAGCGCCTTCCTCAGGGG  812
            ||.||||..|||||||||||.||||||||||||||.||.|..|||||||.|||||||||.|||||.||||||||
Sbjct  730  CTTCCTGGACGGGACTCTTTATACCGGCTGGAGAAGCGTCCAGGCCGGACTGAGCCCAGTGCCTTGCTCAGGGG  803

Query  813  GCATGGCAGCAGGAAGGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAAATTGAACAGGTCCTGAAGGAGCAGC  886
            ||||||||.||||||.||||||||||||||||||||||||||||||||.||.|||||.|.|||.||||||||||
Sbjct  804  GCATGGCATCAGGAAAGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAGATCGAACAAGCCCTAAAGGAGCAGC  877

Query  887  CGGGCCGGGGGCTCCCCCAGCTCCCCAGCAGCTGCTACAGCGTGGACCGGGGGAAAAGGAACACTGGAACCTTG  960
            |.||||||||.||||||||||||||.||||||||||||||.||.||||..||||..|||||.||||||||.|||
Sbjct  878  CTGGCCGGGGTCTCCCCCAGCTCCCTAGCAGCTGCTACAGTGTAGACCAAGGGAGGAGGAAGACTGGAACTTTG  951

Query  961  GGCTCCTTGGAGGAGCCGGCAGGGGGCGCGAGTGTGAGCGCTGGCAGCCGGGCAGTCGGAGTGGCTGGTGTTGC  1034
            |||.|||||||||||||..||||....||.|||||.|||.|..|||||.||||||..||||||||.||.|||||
Sbjct  952  GGCACCTTGGAGGAGCCAACAGGAACTGCAAGTGTAAGCCCCAGCAGCAGGGCAGGAGGAGTGGCCGGAGTTGC  1025

Query 1035  GGGGGAGGCGGGCCCACCCCCAGAGAGGGAAGGCAGTGGTTCCACTAAGCCCGGGACCCCTGGAAATAGCCCTA  1108
            .||||||||.||||||||||..||.|||||||||||||.|||||..|||.|.|.||||||||||||||||.|.|
Sbjct 1026  TGGGGAGGCAGGCCCACCCCTGGACAGGGAAGGCAGTGCTTCCATGAAGTCAGAGACCCCTGGAAATAGCTCCA  1099

Query 1109  GCTCCCAGCGGCTGCCATCGAAGAGTTCCCTCGATCCCGCTGTGAACCCTGTCCCCAAACCCAAGCGCACCTTT  1182
            |..||||||.||||||..|||||||.||||..|||||.||||||||||||||.||||||||||||||.||||||
Sbjct 1100  GTCCCCAGCTGCTGCCTCCGAAGAGCTCCCCTGATCCAGCTGTGAACCCTGTTCCCAAACCCAAGCGTACCTTT  1173

Query 1183  GAATACGAGGCTGACAAGAACCCCAAGAGTAAGCCCAGTAATGGTCTACCTCCTTCACCCACACCTGCTGCTCC  1256
            ||.|||||||||||||||||.||.||||.||||||.||.|||||||||||||||||||||||||||||||||||
Sbjct 1174  GAGTACGAGGCTGACAAGAATCCTAAGACTAAGCCAAGCAATGGTCTACCTCCTTCACCCACACCTGCTGCTCC  1247

Query 1257  ACCTCCCTTGCCCTCCACCCCAGCCCCGCCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGCAAGT  1330
            |||.||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1248  ACCCCCCTTGCCTTCCACCCCAGCCCCACCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGGAAGT  1321

Query 1331  CCCAGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCACTGAG  1404
            |.||||.||||||||||||.||||||||||||||||||||||||||.||||||||.|||||||||||.||||||
Sbjct 1322  CACAGAACAGAAAATCCTTCGAGTTTGAGGATGCATCCAGTCTCCAATCCCTGTATCCCTCTTCTCCTACTGAG  1395

Query 1405  AATGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGATATTGTGGG  1478
            |||||||||||||..|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1396  AATGGTACTGAGAGTCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAGAATGCCTATGAAGATATTGTGGG  1469

Query 1479  AGATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAAAATCCCAGCAAC  1552
            ||..||.||||||||||||||.||.|||||||||||||||||||.|||.|||||.|||||||||||||||||||
Sbjct 1470  AGGGCTTCCCAAGGAGAATCCCTACGAGGATGTGGACTTAAAGAACCGGAGAGCTGGACGAAAATCCCAGCAAC  1543

Query 1553  TGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTACAACAGCCCGCCCACA  1626
            |||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||..|||.||||..
Sbjct 1544  TGTCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCCCAAGACAGGAAGTACAACCACCCACCCATG  1617

Query 1627  CAGCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCACCGGCTGCC  1700
            |||||.||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||.||..||||
Sbjct 1618  CAGCTGTCCCTGAAGTCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCATCGTTTGCC  1691

Query 1701  ACGATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGCTGAGTCTGCCGTCCTCACCCTCCA  1774
            ||||||||||||||||||.||||||||.||||||.|||||.|||||||||||||.|||||.||.||||||||||
Sbjct 1692  ACGATTACCCAAGAGGCATAGCCATGATGACATGATGCTGTTGGCTCAGCTGAGCCTGCCATCTTCACCCTCCA  1765

Query 1775  GCCTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAGCCGCCGGGCCCGCCGCATTCCCAAGCTT  1848
            ||||||||||.|||||||||||||||||.||.||||||||||||||||||.||.||||||||||||||||||||
Sbjct 1766  GCCTCAATGAGGACAGCCTCAGCACCACAAGTGAGCTGCTGTCCAGCCGCAGGTCCCGCCGCATTCCCAAGCTT  1839

Query 1849  GTCCAAAGAACTAACTCCATCTACAATGCCAAGAGAGGAAAGAAGAGATTAAAAAAGTTGTCTATGTCCAGCAT  1922
            ||||||||||.||||||.|||||.|||||||||||||||||||||||.||.||||||.||||||||||||||.|
Sbjct 1840  GTCCAAAGAATTAACTCTATCTATAATGCCAAGAGAGGAAAGAAGAGGTTGAAAAAGCTGTCTATGTCCAGCCT  1913

Query 1923  TGAAACAGCATCACTGAGAGATGAAAACAGTGAGAGCGAGAGCGACTCTGATGACAGGTTCAAAGCCCACACAC  1996
            |||.|||||||||.||||||||||.||||||||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct 1914  TGAGACAGCATCATTGAGAGATGAGAACAGTGAAAGCGAGAGTGACTCTGATGACAGGTTCAAAGCCCACACCC  1987

Query 1997  AGCGCCTGGTCCACATCCAGTCGATGCTGAAGCGCGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAG  2070
            |||||.||||||||||||||||||||||||||||.||.|||||||||||.||||||||||||||||||||.|||
Sbjct 1988  AGCGCTTGGTCCACATCCAGTCGATGCTGAAGCGAGCGCCCAGCTATCGGACGCTGGAGCTGGAGCTGCTCGAG  2061

Query 2071  TGGCAGGAGCGGGAGCTTTTTGAGTACTTTGTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCT  2144
            |||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||.|||||||||||
Sbjct 2062  TGGCAGGAGCGGGAGCTTTTTGAGTACTTTGTGGTTGTGTCCCTCAAGAAGAAGCCATCTCGGAACACCTACCT  2135

Query 2145  CCCCGAAGTCTCCTACCAGTTTCCCAAGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCA  2218
            |||.|||||||||||.||||||||||||||||||||.||||||||.||||||||.||||||||.||||||||||
Sbjct 2136  CCCTGAAGTCTCCTATCAGTTTCCCAAGCTGGACCGTCCCACCAAACAGATGCGGGAGGCAGAAGAAAGGCTCA  2209

Query 2219  AAGCCATTCCCCAGTTTTGCTTCCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTT  2292
            ||||.||.||||||||||||||.||.|||||||||||||||||.|||||||||||.||.||||||||.||||||
Sbjct 2210  AAGCTATCCCCCAGTTTTGCTTTCCGGATGCCAAGGACTGGCTCCCTGTGTCAGAATACAGCAGTGAAACCTTT  2283

Query 2293  TCTTTCATGCTGACTGGGGAAGATGGCGGCAGACGCTTTGGCTACTGCAGGCGCTTACT---------------  2351
            |||||||||||||||||||||||||||.||||.|||||||||||.||.|||||||||||               
Sbjct 2284  TCTTTCATGCTGACTGGGGAAGATGGCAGCAGGCGCTTTGGCTATTGTAGGCGCTTACTGCATACCTCTACCCT  2357

Query 2352  ------------------------------------------------------------GCCAAGTGGGAAAG  2365
                                                                        ||||||||||||||
Sbjct 2358  GTGTCTGTGTTCCTTTCCCTCCTTCCTATCAGAAAACAGCATGTTTGGAGGGAGAAAAGAGCCAAGTGGGAAAG  2431

Query 2366  GGCCCCGGTTGCCAGAGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGAT  2439
            ||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||       
Sbjct 2432  GGCCTCGGTTGCCAGAGGTGTACTGTGTCATCAGCCGCCTAGGCTGCTTCGGTTTGTTTTCCAAGGT-------  2498

Query 2440  GAGGTGGAGCGCCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTT  2513
              ||||| ||.|.||                          ||||      |||                    
Sbjct 2499  --GGTGG-GCACAGG--------------------------TCCT------AGA--------------------  2517

Query 2514  CCCAGCCCCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGC  2587
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 2588  GGCCCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCATC  2661
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 2662  CGAATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCCAGCTG  2735
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 2736  CTCCCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCCCGGCCTCCA  2809
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 2810  TGATTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCCCAAACTGAAGGAG  2883
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 2884  CTGCCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAGATGGACGACGAAGACAC  2957
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 2958  GTTGTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGAATGAGCTGATCTCCCAGGACT  3031
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 3032  CTGACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTCGGAGGTGTTTATCCGGTTCTTTGTG  3105
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 3106  GAGACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAGGGAGAGAGGGCCTTTCAGCGAGAGGCCTT  3179
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 3180  CCGCAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTGAGGTTTTTATGGAGTCTCAGATGTTTGCTGGCT  3253
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 3254  TCATCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAAGGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAA  3327
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 3328  GAACTCCCAGACACTGAGCAGAGTGGAATGAATAAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCA  3401
                                                                                      
Sbjct 2518  --------------------------------------------------------------------------  2517

Query 3402  CAAGAAGAAT  3411
                      
Sbjct 2518  ----------  2517

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