Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07197
Subject:
NM_001135024.1
Aligned Length:
1516
Identities:
1423
Gaps:
71

Alignment

Query    1  ATGGCGGCCTCCTGGAGGCTGGGCTGTGATC-CGCGGCTGCTGCGTTATCTTGTGGGCTTCCCTGGCCGCCGAA  73
                                   .||..||| .||||| ||          ||.||||..|||.||  |.||..
Sbjct    1  -----------------------ATGCAATCAGGCGGC-GC----------TGAGGGCAGCCCGGG--GGCGGG  38

Query   74  GCGTA--GGGCTGGTGAAGGGGGCTCTTGGGTGGTCT-GTAAG---CCGCGGAGCTAATTGGAGATGGTTTCAC  141
            |||.|  ||||       ||||||     .|.||||| |||||   ||||.| |||     ||||   |.|| |
Sbjct   39  GCGAACGGGGC-------GGGGGC-----CGGGGTCTGGTAAGGCCCCGCCG-GCT-----GAGA---TATC-C  90

Query  142  AGC-ACGCA-GTGGCTTC----GGGGTGATCCCATTAAGATACTAATGCCATCACTGTCTCCTACAATGGAAGA  209
            ||| .|||| .||.||||    |.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   91  AGCGGCGCACCTGACTTCCCGGGAGGTGATCCCATTAAGATACTAATGCCATCACTGTCTCCTACAATGGAAGA  164

Query  210  AGGAAACATTGTGAAATGGCTGAAAAAGGAAGGTGAAGCGGTGAGTGCTGGAGATGCATTATGTGAAATTGAGA  283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  165  AGGAAACATTGTGAAATGGCTGAAAAAGGAAGGTGAAGCGGTGAGTGCTGGAGATGCATTATGTGAAATTGAGA  238

Query  284  CTGACAAAGCTGTGGTTACCTTAGATGCAAGTGATGATGGAATCTTGGCCAAAATCGTGGTTGAAGAAGGAAGT  357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  239  CTGACAAAGCTGTGGTTACCTTAGATGCAAGTGATGATGGAATCTTGGCCAAAATCGTGGTTGAAGAAGGAAGT  312

Query  358  AAAAATATACGGCTAGGTTCACTAATTGGTTTGATAGTAGAAGAAGGAGAAGATTGGAAACATGTTGAAATTCC  431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  313  AAAAATATACGGCTAGGTTCACTAATTGGTTTGATAGTAGAAGAAGGAGAAGATTGGAAACATGTTGAAATTCC  386

Query  432  CAAAGACGTAGGTCCTCCACCACCAGTTTCAAAACCTTCAGAGCCTCGCCCCTCACCAGAACCACAGATTTCCA  505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  387  CAAAGACGTAGGTCCTCCACCACCAGTTTCAAAACCTTCAGAGCCTCGCCCCTCACCAGAACCACAGATTTCCA  460

Query  506  TCCCTGTCAAGAAGGAACACATACCCGGGACACTACGGTTCCGTTTAAGTCCAGCTGCCCGCAATATTCTGGAA  579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  461  TCCCTGTCAAGAAGGAACACATACCCGGGACACTACGGTTCCGTTTAAGTCCAGCTGCCCGCAATATTCTGGAA  534

Query  580  AAACACTCACTGGATGCTAGCCAGGGCACAGCCACTGGCCCTCGGGGGATATTCACTAAAGAGGATGCTCTCAA  653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  535  AAACACTCACTGGATGCTAGCCAGGGCACAGCCACTGGCCCTCGGGGGATATTCACTAAAGAGGATGCTCTCAA  608

Query  654  ACTTGTCCAGTTGAAACAAACGGGCAAGATTACCGAGTCCAGACCAACTCCAGCCCCCACAGCCACTCCCACAG  727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  609  ACTTGTCCAGTTGAAACAAACGGGCAAGATTACCGAGTCCAGACCAACTCCAGCCCCCACAGCCACTCCCACAG  682

Query  728  CACCTTCGCCCCTACAGGCCACAGCTGGACCATCTTATCCCCGGCCTGTGATCCCACCAGTATCAACTCCTGGA  801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  683  CACCTTCGCCCCTACAGGCCACAGCTGGACCATCTTATCCCCGGCCTGTGATCCCACCAGTATCAACTCCTGGA  756

Query  802  CAACCCAATGCAGTGGGCACATTCACTGAAATCCCCGCCAGCAATATTCGAAGAGTCATTGCCAAGAGATTAAC  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  757  CAACCCAATGCAGTGGGCACATTCACTGAAATCCCCGCCAGCAATATTCGAAGAGTTATTGCCAAGAGATTAAC  830

Query  876  TGAATCTAAAAGTACTGTACCTCATGCATATGCTACTGCTGACTGTGACCTTGGAGCTGTTTTAAAAGTTAGGC  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  831  TGAATCTAAAAGTACTGTACCTCATGCATATGCTACTGCTGACTGTGACCTTGGAGCTGTTTTAAAAGTTAGGC  904

Query  950  AAGATCTGGTCAAAGATGACATTAAAGTATCAGTAAATGATTTTATCATCAAGGCAGCAGCTGTTACCCTTAAA  1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  905  AAGATCTGGTCAAAGATGACATTAAAGTATCAGTAAATGATTTTATCATCAAGGCAGCAGCTGTTACCCTTAAA  978

Query 1024  CAAATGCCAGATGTTAATGTAAGCTGGGATGGAGAGGGCCCAAAGCAACTGCCATTTATTGACATTTCAGTGGC  1097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  979  CAAATGCCAGATGTTAATGTAAGCTGGGATGGAGAGGGCCCAAAGCAACTGCCATTTATTGACATTTCAGTGGC  1052

Query 1098  TGTGGCAACAGTTAAAGGCTTACTTACTCCAATCATAAAAGATGCTGCTGCTAAAGGTATCCAGGAAATTGCTG  1171
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1053  TGTGGCAACAGATAAAGGCTTACTTACTCCAATCATAAAAGATGCTGCTGCTAAAGGTATCCAGGAAATTGCTG  1126

Query 1172  ACTCTGTAAAGGCTCTATCAAAGAAAGCAAGAGATGGAAAATTGTTGCCTGAAGAATACCAAGGAGGATCTTTT  1245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127  ACTCTGTAAAGGCTCTATCAAAGAAAGCAAGAGATGGAAAATTGTTGCCTGAAGAATACCAAGGAGGATCTTTT  1200

Query 1246  AGTATTTCCAACTTGGGGATGTTTGGCATCGACGAATTTACTGCAGTGATTAACCCTCCTCAGGCCTGCATTTT  1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201  AGTATTTCCAACTTGGGGATGTTTGGCATCGACGAATTTACTGCAGTGATTAACCCTCCTCAGGCCTGCATTTT  1274

Query 1320  GGCGGTTGGGAGGTTCCGACCTGTGCTGAAGCTCACTGAGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCC  1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275  GGCGGTTGGGAGGTTCCGACCTGTGCTGAAGCTCACTGAGGATGAAGAGGGAAATGCCAAACTGCAGCAGCGCC  1348

Query 1394  AGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGTGGTTGATGACGAACTGGCAACCAGGTTTCTTAAAAGT  1467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1349  AGCTCATAACAGTCACAATGTCAAGTGACAGTCGAGTGGTTGATGACGAACTGGCAACCAGGTTTCTTAAAAGT  1422

Query 1468  TTTAAAGCAAACCTAGAGAATCCTATCCGACTTGCC  1503
            ||||||||||||||||||||||||||||||||||||
Sbjct 1423  TTTAAAGCAAACCTAGAGAATCCTATCCGACTTGCC  1458

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