Nucleotide Global Alignment

Description

Query:
ccsbBroad304_07568
Subject:
XM_006719751.4
Aligned Length:
3276
Identities:
3255
Gaps:
18

Alignment

Query    1  ATGATGGATTCTCCGAAGATTGGAAATGGTTTGCCAGTGATTGGACCAGGGACTGATATAGGGATATCTTCACT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGATGGATTCTCCGAAGATTGGAAATGGTTTGCCAGTGATTGGACCAGGGACTGATATAGGGATATCTTCACT  74

Query   75  CCACATGGTGGGGTATTTGGGAAAAAATTTTGATTCAGCTAAAGTTCCATCAGATGAGTATTGCCCTGCTTGTA  148
            |||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCACATG------------------AATTTTGATTCAGCTAAAGTTCCATCAGATGAGTATTGCCCTGCTTGTA  130

Query  149  GAGAGAAGGGAAAGTTAAAAGCCTTAAAGACTTACCGAATTAGTTTTCAAGAATCTATCTTTTTGTGTGAGGAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  131  GAGAGAAGGGAAAGTTAAAAGCCTTAAAGACTTACCGAATTAGTTTTCAAGAATCTATCTTTTTGTGTGAGGAT  204

Query  223  CTGCAGTGCATCTATCCTTTGGGCTCTAAATCACTTAATAACCTAATTTCTCCTGATTTGGAAGAATGTCACAC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  205  CTGCAGTGCATCTATCCTTTGGGCTCTAAATCACTTAATAACCTAATTTCTCCTGATTTGGAAGAATGTCACAC  278

Query  297  TCCACATAAGCCTCAGAAAAGGAAGAGCTTAGAAAGCAGCTATAAGGATTCACTTCTTTTAGCAAATTCCAAAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  279  TCCACATAAGCCTCAGAAAAGGAAGAGCTTAGAAAGCAGCTATAAGGATTCACTTCTTTTAGCAAATTCCAAAA  352

Query  371  AGACTAGAAATTATATTGCTATTGACGGTGGAAAAGTTTTGAACAGCAAACATAATGGAGAAGTATATGACGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  353  AGACTAGAAATTATATTGCTATTGACGGTGGAAAAGTTTTGAACAGCAAACATAATGGAGAAGTATATGACGAA  426

Query  445  ACCTCGTCAAACTTACCTGATAGTAGTGGTCAACAGAATCCAATTAGGACAGCTGATTCCTTGGAGCGGAATGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  427  ACCTCGTCAAACTTACCTGATAGTAGTGGTCAACAGAATCCAATTAGGACAGCTGATTCCTTGGAGCGGAATGA  500

Query  519  GATTTTGGAAGCTGATACTGTTGACATGGCTACTACAAAAGATCCTGCTACAGTTGATGTCTCTGGAACTGGCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  501  GATTTTGGAAGCTGATACTGTTGACATGGCTACTACAAAAGATCCTGCTACAGTTGATGTCTCTGGAACTGGCA  574

Query  593  GACCTTCCCCTCAAAATGAAGGATGTACATCTAAGCTGGAAATGCCACTGGAGAGCAAATGTACATCATTTCCC  666
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  575  GACCTTCCCCTCAAAATGAAGGATGTACATCTAAACTGGAAATGCCACTGGAGAGCAAATGTACATCATTTCCC  648

Query  667  CAGGCTTTATGTGTCCAGTGGAAAAATGCTTATGCTCTCTGTTGGTTAGACTGTATCCTGTCAGCTTTGGTGCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  649  CAGGCTTTATGTGTCCAGTGGAAAAATGCTTATGCTCTCTGTTGGTTAGACTGTATCCTGTCAGCTTTGGTGCA  722

Query  741  CTCGGAAGAGTTAAAGAACACCGTGACTGGACTGTGCTCGAAGGAGGAATCTATATTCTGGCGGTTGCTTACAA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  723  CTCGGAAGAGTTAAAGAACACCGTGACTGGACTGTGCTCGAAGGAGGAATCTATATTCTGGCGGTTGCTTACAA  796

Query  815  AATATAATCAAGCAAATACACTTCTATATACCAGTCAATTGAGTGGTGTTAAAGATGGAGATTGTAAAAAACTT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  797  AATATAATCAAGCAAATACACTTCTATATACCAGTCAATTGAGTGGTGTTAAAGATGGAGATTGTAAAAAACTT  870

Query  889  ACCTCAGAAATATTTGCAGAGATAGAGACCTGTCTGAATGAAGTTAGAGATGAAATTTTTATTAGCCTTCAGCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  871  ACCTCAGAAATATTTGCAGAGATAGAGACCTGTCTGAATGAAGTTAGAGATGAAATTTTTATTAGCCTTCAGCC  944

Query  963  CCAGCTTAGATGCACATTAGGTGATATGGAAAGCCCTGTGTTTGCATTTCCCCTGCTCTTAAAACTAGAAACCC  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  945  CCAGCTTAGATGCACATTAGGTGATATGGAAAGCCCTGTGTTTGCATTTCCCCTGCTCTTAAAACTAGAAACCC  1018

Query 1037  ACATTGAAAAGCTCTTCCTATATTCTTTTTCTTGGGACTTTGAATGTTCGCAGTGTGGACACCAATATCAAAAC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019  ACATTGAAAAGCTCTTCCTATATTCTTTTTCTTGGGACTTTGAATGTTCGCAGTGTGGACACCAATATCAAAAC  1092

Query 1111  AGGCATATGAAGAGTCTGGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093  AGGCATATGAAGAGTCTGGTCACCTTTACAAATGTCATCCCTGAGTGGCACCCACTTAATGCTGCCCATTTTGG  1166

Query 1185  TCCATGTAACAATTGCAACAGTAAATCACAAATAAGAAAAATGGTATTAGAAAAAGTATCTCCCATATTCATGT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167  TCCATGTAACAATTGCAACAGTAAATCACAAATAAGAAAAATGGTATTAGAAAAAGTATCTCCCATATTCATGT  1240

Query 1259  TGCACTTTGTAGAAGGCTTACCACAGAATGACTTGCAGCACTATGCATTTCATTTTGAAGGCTGTCTTTATCAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241  TGCACTTTGTAGAAGGCTTACCACAGAATGACTTGCAGCACTATGCATTTCATTTTGAAGGCTGTCTTTATCAG  1314

Query 1333  ATAACTTCTGTAATTCAGTATCGAGCAAATAATCATTTTATAACATGGATTTTAGATGCTGATGGAAGTTGGCT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315  ATAACTTCTGTAATTCAGTATCGAGCAAATAATCATTTTATAACATGGATTTTAGATGCTGATGGAAGTTGGCT  1388

Query 1407  GGAATGTGATGACTTAAAAGGCCCATGTTCTGAAAGGCACAAGAAATTTGAAGTTCCTGCTTCAGAGATACATA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389  GGAATGTGATGACTTAAAAGGCCCATGTTCTGAAAGGCACAAGAAATTTGAAGTTCCTGCTTCAGAGATACATA  1462

Query 1481  TTGTTATTTGGGAAAGAAAAATATCCCAAGTGACAGATAAAGAAGCTGCCTGCCTTCCACTTAAAAAGACTAAT  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463  TTGTTATTTGGGAAAGAAAAATATCCCAAGTGACAGATAAAGAAGCTGCCTGCCTTCCACTTAAAAAGACTAAT  1536

Query 1555  GACCAACACGCTCTCAGTAATGAGAAACCAGTATCTTCAACATCGTGTTCTGTGGGTGATGCTGCCTCAGCTGA  1628
            |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1537  GACCAACACGCTCTCAGTAATGAGAAACCAGTATCTTTAACATCGTGTTCTGTGGGTGATGCTGCCTCAGCTGA  1610

Query 1629  AACAGCCTCAGTAACTCACCCTAAAGATATATCAGTTGCCCCTCGTACTCTTTCACAGGACACAGCTGTAACTC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611  AACAGCCTCAGTAACTCACCCTAAAGATATATCAGTTGCCCCTCGTACTCTTTCACAGGACACAGCTGTAACTC  1684

Query 1703  ATGGAGATCATTTACTTTCAGGTCCAAAAGGTTTGGTTGACAATATTTTACCTCTGACACTTGAAGAAACTATC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685  ATGGAGATCATTTACTTTCAGGTCCAAAAGGTTTGGTTGACAATATTTTACCTCTGACACTTGAAGAAACTATC  1758

Query 1777  CAGAAAACAGCCTCAGTTTCACAGTTAAATTCTGAAGCTTTCCTGTTAGAAAATAAACCTGTAGCAGAAAATAC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759  CAGAAAACAGCCTCAGTTTCACAGTTAAATTCTGAAGCTTTCCTGTTAGAAAATAAACCTGTAGCAGAAAATAC  1832

Query 1851  AGGAATTCTCAAAACCAATACTTTGCTATCACAAGAATCACTAATGGCTTCTTCAGTATCAGCTCCATGTAATG  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833  AGGAATTCTCAAAACCAATACTTTGCTATCACAAGAATCACTAATGGCTTCTTCAGTATCAGCTCCATGTAATG  1906

Query 1925  AAAAGCTTATTCAAGACCAATTTGTGGACATAAGTTTTCCATCCCAAGTTGTAAATACAAACATGCAGTCAGTA  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1907  AAAAGCTTATTCAAGACCAATTTGTGGACATAAGTTTTCCATCCCAAGTTGTAAATACAAACATGCAGTCAGTA  1980

Query 1999  CAGCTGAATACAGAAGATACTGTAAATACTAAATCTGTGAATAATACTGATGCTACTGGTCTTATACAGGGAGT  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1981  CAGCTGAATACAGAAGATACTGTAAATACTAAATCTGTGAATAATACTGATGCTACTGGTCTTATACAGGGAGT  2054

Query 2073  GAAGTCAGTAGAAATTGAGAAGGACGCTCAGTTAAAACAATTCCTTACACCAAAAACTGAACAATTAAAACCAG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2055  GAAGTCAGTAGAAATTGAGAAGGACGCTCAGTTAAAACAATTCCTTACACCAAAAACTGAACAATTAAAACCAG  2128

Query 2147  AACGTGTCACATCTCAGGTATCTAATTTGAAGAAAAAAGAAACTACAGCAGATTCTCAAACCACAACATCTAAG  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2129  AACGTGTCACATCTCAGGTATCTAATTTGAAGAAAAAAGAAACTACAGCAGATTCTCAAACCACAACATCTAAG  2202

Query 2221  TCATTACAGAATCAGTCTCTGAAAGAAAATCAGAAGAAGCCATTTGTGGGAAGTTGGGTTAAAGGCTTAATAAG  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2203  TCATTACAGAATCAGTCTCTGAAAGAAAATCAGAAGAAGCCATTTGTGGGAAGTTGGGTTAAAGGCTTAATAAG  2276

Query 2295  CAGGGGTGCTTCTTTTATGCCACTCTGTGTTTCAGCTCATAATAGAAACACTATAACTGATTTACAACCTTCAG  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2277  CAGGGGTGCTTCTTTTATGCCACTCTGTGTTTCAGCTCATAATAGAAACACTATAACTGATTTACAACCTTCAG  2350

Query 2369  TTAAAGGGGTAAATAATTTTGGTGGCTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGAAA  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2351  TTAAAGGGGTAAATAATTTTGGTGGCTTTAAAACTAAAGGTATAAACCAGAAGGCCAGCCACGTATCCAAGAAA  2424

Query 2443  GCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGC  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2425  GCTCGTAAGAGTGCAAGTAAGCCTCCTCCCATCAGTAAGCCACCAGCAGGCCCTCCATCGTCTAATGGCACAGC  2498

Query 2517  TGCCCACCCACATGCTCATGCTGCTTCAGAAGTTTTGGAAAAGTCTGGAAGCACCTCATGTGGAGCTCAACTCA  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2499  TGCCCACCCACATGCTCATGCTGCTTCAGAAGTTTTGGAAAAGTCTGGAAGCACCTCATGTGGAGCTCAACTCA  2572

Query 2591  ACCACAGTTCTTATGGGAATGGTATTTCTTCAGCAAACCATGAAGACTTGGTGGAAGGTCAGATTCATAAACTT  2664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2573  ACCACAGTTCTTATGGGAATGGTATTTCTTCAGCAAACCATGAAGACTTGGTGGAAGGTCAGATTCATAAACTT  2646

Query 2665  CGTCTAAAACTTCGTAAAAAGCTAAAGGCAGAAAAGAAGAAATTAGCTGCTCTTATGTCTTCCCCGCAAAGCAG  2738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2647  CGTCTAAAACTTCGTAAAAAGCTAAAGGCAGAAAAGAAGAAATTAGCTGCTCTTATGTCTTCCCCGCAAAGCAG  2720

Query 2739  AACAGTTCGAAGTGAAAATCTAGAACAGGTGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAATAGAGGACT  2812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2721  AACAGTTCGAAGTGAAAATCTAGAACAGGTGCCCCAGGATGGGTCTCCAAATGATTGTGAATCAATAGAGGACT  2794

Query 2813  TGTTAAATGAGCTACCATATCCAATTGATATTGCCAATGAGTCTGCATGCACCACTGTTCCTGGTGTTTCCCTG  2886
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 2795  TGTTAAATGAGCTACCATATCCAATTGATATTGCCAGTGAGTCTGCATGCACCACTGTTCCTGGTGTTTCCCTG  2868

Query 2887  TACAGTAGTCAAACTCATGAAGAAATTTTAGCGGAATTATTGTCTCCTACACCTGTTTCAACAGAGCTGTCAGA  2960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2869  TACAGTAGTCAAACTCATGAAGAAATTTTAGCGGAATTATTGTCTCCTACACCTGTTTCAACAGAGCTGTCAGA  2942

Query 2961  AAATGGGGAAGGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCA  3034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2943  AAATGGGGAAGGTGACTTTAGGTATTTGGGAATGGGAGATAGTCATATCCCACCACCAGTACCAAGTGAATTCA  3016

Query 3035  ATGATGTTTCCCAGAACACACATCTGAGACAGGACCATAATTATTGTAGCCCCACCAAGAAAAATCCATGTGAA  3108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017  ATGATGTTTCCCAGAACACACATCTGAGACAGGACCATAATTATTGTAGCCCCACCAAGAAAAATCCATGTGAA  3090

Query 3109  GTTCAGCCAGACTCTCTGACAAATAATGCCTGCGTTAGAACATTAAACTTGGAGAGTCCGATGAAGACTGATAT  3182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091  GTTCAGCCAGACTCTCTGACAAATAATGCCTGCGTTAGAACATTAAACTTGGAGAGTCCGATGAAGACTGATAT  3164

Query 3183  TTTCGATGAGTTTTTTTCCTCCTCAGCATTAAATGCTTTAGCAAATGACACATTAGACCTACCTCATTTCGATG  3256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165  TTTCGATGAGTTTTTTTCCTCCTCAGCATTAAATGCTTTAGCAAATGACACATTAGACCTACCTCATTTCGATG  3238

Query 3257  AATATCTGTTTGAGAATTAT  3276
            ||||||||||||||||||||
Sbjct 3239  AATATCTGTTTGAGAATTAT  3258

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